RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 ERCC6L2Q5T890 1561 aa20.93■□□□□ 0.94
SPG7-211ENST00000565370 KIAA0586Q9BVV6 1533 aa20.9■□□□□ 0.94
SPG7-211ENST00000565370 PRG4Q92954 1404 aaPredicted RBP20.88■□□□□ 0.93
SPG7-211ENST00000565370 RAPGEF2Q9Y4G8 1499 aa20.84■□□□□ 0.93
SPG7-211ENST00000565370 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
SPG7-211ENST00000565370 JPH4Q96JJ6 628 aa20.83■□□□□ 0.93
SPG7-211ENST00000565370 IQGAP2Q13576 1575 aa20.82■□□□□ 0.92
SPG7-211ENST00000565370 CTTNBP2Q8WZ74 1663 aa20.74■□□□□ 0.91
SPG7-211ENST00000565370 CARMIL2Q6F5E8 1435 aa20.72■□□□□ 0.91
SPG7-211ENST00000565370 EEA1Q15075 1411 aa20.7■□□□□ 0.9
SPG7-211ENST00000565370 PRXQ9BXM0 1461 aa20.69■□□□□ 0.9
SPG7-211ENST00000565370 UGGT2Q9NYU1 1516 aa20.66■□□□□ 0.9
SPG7-211ENST00000565370 TNIKQ9UKE5 1360 aa20.63■□□□□ 0.89
SPG7-211ENST00000565370 ADCY10Q96PN6 1610 aa20.63■□□□□ 0.89
SPG7-211ENST00000565370 KIAA0556O60303 1618 aa20.62■□□□□ 0.89
SPG7-211ENST00000565370 DISP1Q96F81 1524 aa20.61■□□□□ 0.89
SPG7-211ENST00000565370 PTPRGP23470 1445 aa20.61■□□□□ 0.89
SPG7-211ENST00000565370 GOLGA3Q08378 1498 aa20.57■□□□□ 0.88
SPG7-211ENST00000565370 NPM1P06748 294 aaKnown RBP eCLIP20.57■□□□□ 0.88
SPG7-211ENST00000565370 CSRNP3Q8WYN3 585 aa20.57■□□□□ 0.88
SPG7-211ENST00000565370 MAPKBP1O60336 1514 aa20.57■□□□□ 0.88
SPG7-211ENST00000565370 TTBK1Q5TCY1 1321 aaPredicted RBP20.52■□□□□ 0.87
SPG7-211ENST00000565370 KIF21BO75037 1637 aa20.5■□□□□ 0.87
SPG7-211ENST00000565370 ABCC2Q92887 1545 aa20.5■□□□□ 0.87
SPG7-211ENST00000565370 UHRF1BP1LA0JNW5 1464 aa20.5■□□□□ 0.87
SPG7-211ENST00000565370 KIF13AQ9H1H9 1805 aa20.49■□□□□ 0.87
SPG7-211ENST00000565370 UACAQ9BZF9 1416 aa20.48■□□□□ 0.87
SPG7-211ENST00000565370 CHIC1Q5VXU3 224 aa20.48■□□□□ 0.87
SPG7-211ENST00000565370 DIP2BQ9P265 1576 aa20.46■□□□□ 0.87
SPG7-211ENST00000565370 ABCC10Q5T3U5 1492 aa20.45■□□□□ 0.86
SPG7-211ENST00000565370 FAM9AQ8IZU1 332 aaPredicted RBP20.44■□□□□ 0.86
SPG7-211ENST00000565370 SAMD9Q5K651 1589 aa20.41■□□□□ 0.86
SPG7-211ENST00000565370 ZCCHC11Q5TAX3 1644 aaKnown RBP20.38■□□□□ 0.85
SPG7-211ENST00000565370 KDM5BQ9UGL1 1544 aa20.38■□□□□ 0.85
SPG7-211ENST00000565370 PLB1Q6P1J6 1458 aa20.38■□□□□ 0.85
SPG7-211ENST00000565370 ABCA8O94911 1581 aa20.36■□□□□ 0.85
SPG7-211ENST00000565370 ASXL2Q76L83 1435 aa20.36■□□□□ 0.85
SPG7-211ENST00000565370 FAM69CQ0P6D2 419 aa20.35■□□□□ 0.85
SPG7-211ENST00000565370 EFCAB5A4FU69 1503 aa20.33■□□□□ 0.85
SPG7-211ENST00000565370 GLI2P10070 1586 aa20.29■□□□□ 0.84
SPG7-211ENST00000565370 WDR7Q9Y4E6 1490 aa20.27■□□□□ 0.84
SPG7-211ENST00000565370 TSPOAP1O95153 1857 aa20.26■□□□□ 0.83
SPG7-211ENST00000565370 RAPGEF6Q8TEU7 1601 aa20.26■□□□□ 0.83
SPG7-211ENST00000565370 P3H3Q8IVL6 736 aa20.25■□□□□ 0.83
SPG7-211ENST00000565370 EPRSP07814 1512 aaKnown RBP20.24■□□□□ 0.83
SPG7-211ENST00000565370 FHOD3Q2V2M9 1422 aa20.24■□□□□ 0.83
SPG7-211ENST00000565370 UBTFP17480 764 aaKnown RBP20.23■□□□□ 0.83
SPG7-211ENST00000565370 RANGAP1P46060 587 aaPredicted RBP20.23■□□□□ 0.83
SPG7-211ENST00000565370 MAP3K4Q9Y6R4 1608 aa20.2■□□□□ 0.82
SPG7-211ENST00000565370 KDM6BO15054 1643 aa20.2■□□□□ 0.82
SPG7-211ENST00000565370 KDM4FA0A1W2PPD8 638 aa20.18■□□□□ 0.82
SPG7-211ENST00000565370 EHMT2Q96KQ7 1210 aa20.18■□□□□ 0.82
SPG7-211ENST00000565370 TEX14Q8IWB6 1497 aa20.17■□□□□ 0.82
SPG7-211ENST00000565370 PPRC1Q5VV67 1664 aaKnown RBP20.16■□□□□ 0.82
SPG7-211ENST00000565370 CFAP43Q8NDM7 1665 aa20.16■□□□□ 0.82
SPG7-211ENST00000565370 NUP153P49790 1475 aaKnown RBP20.13■□□□□ 0.81
SPG7-211ENST00000565370 ATP10BO94823 1461 aa20.12■□□□□ 0.81
SPG7-211ENST00000565370 FMN1Q68DA7 1419 aa20.1■□□□□ 0.81
SPG7-211ENST00000565370 ARID3CA6NKF2 412 aa20.1■□□□□ 0.81
SPG7-211ENST00000565370 ARHGAP35Q9NRY4 1499 aa20.1■□□□□ 0.81
SPG7-211ENST00000565370 HECW1Q76N89 1606 aa20.09■□□□□ 0.81
SPG7-211ENST00000565370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.06■□□□□ 0.8
SPG7-211ENST00000565370 HNRNPUL2Q1KMD3 747 aaKnown RBP20.06■□□□□ 0.8
SPG7-211ENST00000565370 CD109Q6YHK3 1445 aa20.05■□□□□ 0.8
SPG7-211ENST00000565370 MAGI3Q5TCQ9 1506 aa20.05■□□□□ 0.8
SPG7-211ENST00000565370 KCNH8Q96L42 1107 aa20.04■□□□□ 0.8
SPG7-211ENST00000565370 ABCA9Q8IUA7 1624 aa20.04■□□□□ 0.8
SPG7-211ENST00000565370 ILDR1Q86SU0 546 aaPredicted RBP20■□□□□ 0.79
SPG7-211ENST00000565370 CDK13Q14004 1512 aaKnown RBP19.99■□□□□ 0.79
SPG7-211ENST00000565370 PLEKHD1A6NEE1 506 aa19.95■□□□□ 0.78
SPG7-211ENST00000565370 PCF11O94913 1555 aaKnown RBP19.95■□□□□ 0.78
SPG7-211ENST00000565370 CLIP1P30622 1438 aa19.94■□□□□ 0.78
SPG7-211ENST00000565370 CFAP74Q9C0B2 1584 aa19.92■□□□□ 0.78
SPG7-211ENST00000565370 ATP1B4Q9UN42 357 aaPredicted RBP19.92■□□□□ 0.78
SPG7-211ENST00000565370 CCDC18Q5T9S5 1454 aa19.91■□□□□ 0.78
SPG7-211ENST00000565370 NEO1Q92859 1461 aa19.9■□□□□ 0.78
SPG7-211ENST00000565370 TTC37Q6PGP7 1564 aa19.89■□□□□ 0.77
SPG7-211ENST00000565370 PHLDB1Q86UU1 1377 aa19.89■□□□□ 0.77
SPG7-211ENST00000565370 CASKIN1Q8WXD9 1431 aa19.89■□□□□ 0.77
SPG7-211ENST00000565370 FYCO1Q9BQS8 1478 aa19.89■□□□□ 0.77
SPG7-211ENST00000565370 COL17A1Q9UMD9 1497 aaPredicted RBP19.89■□□□□ 0.77
SPG7-211ENST00000565370 KIF14Q15058 1648 aa19.88■□□□□ 0.77
SPG7-211ENST00000565370 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.88■□□□□ 0.77
SPG7-211ENST00000565370 ADGRL1O94910 1474 aa19.88■□□□□ 0.77
SPG7-211ENST00000565370 CDK11AQ9UQ88 783 aaPredicted RBP19.88■□□□□ 0.77
SPG7-211ENST00000565370 LRRIQ1Q96JM4 1722 aa19.87■□□□□ 0.77
SPG7-211ENST00000565370 ARAP3Q8WWN8 1544 aa19.86■□□□□ 0.77
SPG7-211ENST00000565370 TROQ12816 1431 aaPredicted RBP19.83■□□□□ 0.76
SPG7-211ENST00000565370 MYO5CQ9NQX4 1742 aa19.82■□□□□ 0.76
SPG7-211ENST00000565370 CEP162Q5TB80 1403 aa19.82■□□□□ 0.76
SPG7-211ENST00000565370 FANCAO15360 1455 aa19.81■□□□□ 0.76
SPG7-211ENST00000565370 HECW2Q9P2P5 1572 aa19.76■□□□□ 0.75
SPG7-211ENST00000565370 FRMPD1Q5SYB0 1578 aa19.75■□□□□ 0.75
SPG7-211ENST00000565370 PLCH2O75038 1416 aa19.74■□□□□ 0.75
SPG7-211ENST00000565370 AKNAQ7Z591 1439 aa19.74■□□□□ 0.75
SPG7-211ENST00000565370 DENND4BO75064 1496 aaPredicted RBP19.73■□□□□ 0.75
SPG7-211ENST00000565370 RICTORQ6R327 1708 aa19.73■□□□□ 0.75
SPG7-211ENST00000565370 ARHGAP5Q13017 1502 aa19.71■□□□□ 0.75
SPG7-211ENST00000565370 PREX2Q70Z35 1606 aa19.7■□□□□ 0.74
SPG7-211ENST00000565370 ARHGEF40Q8TER5 1519 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms