RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 CEP170Q5SW79 1584 aa20.23■□□□□ 0.83
NSMCE1-208ENST00000565070 KIAA0586Q9BVV6 1533 aa20.19■□□□□ 0.82
NSMCE1-208ENST00000565070 TNIKQ9UKE5 1360 aa20.18■□□□□ 0.82
NSMCE1-208ENST00000565070 OSCARQ8IYS5 282 aa20.18■□□□□ 0.82
NSMCE1-208ENST00000565070 IQGAP2Q13576 1575 aa20.16■□□□□ 0.82
NSMCE1-208ENST00000565070 CLASP1Q7Z460 1538 aa20.14■□□□□ 0.81
NSMCE1-208ENST00000565070 CEP162Q5TB80 1403 aa20.08■□□□□ 0.8
NSMCE1-208ENST00000565070 UGGT2Q9NYU1 1516 aa20.06■□□□□ 0.8
NSMCE1-208ENST00000565070 SHROOM2Q13796 1616 aa20.06■□□□□ 0.8
NSMCE1-208ENST00000565070 JPH4Q96JJ6 628 aa20.03■□□□□ 0.8
NSMCE1-208ENST00000565070 EFCAB5A4FU69 1503 aa20.02■□□□□ 0.8
NSMCE1-208ENST00000565070 CLIP1P30622 1438 aa19.99■□□□□ 0.79
NSMCE1-208ENST00000565070 CARMIL2Q6F5E8 1435 aa19.99■□□□□ 0.79
NSMCE1-208ENST00000565070 SAMD9Q5K651 1589 aa19.98■□□□□ 0.79
NSMCE1-208ENST00000565070 PRG4Q92954 1404 aaPredicted RBP19.96■□□□□ 0.79
NSMCE1-208ENST00000565070 RANGAP1P46060 587 aaPredicted RBP19.96■□□□□ 0.79
NSMCE1-208ENST00000565070 KIAA0556O60303 1618 aa19.95■□□□□ 0.78
NSMCE1-208ENST00000565070 PCGF6Q9BYE7 350 aa19.94■□□□□ 0.78
NSMCE1-208ENST00000565070 DISP1Q96F81 1524 aa19.94■□□□□ 0.78
NSMCE1-208ENST00000565070 ARHGAP35Q9NRY4 1499 aa19.93■□□□□ 0.78
NSMCE1-208ENST00000565070 TRIM26Q12899 539 aaPredicted RBP19.88■□□□□ 0.77
NSMCE1-208ENST00000565070 ERCC6L2Q5T890 1561 aa19.85■□□□□ 0.77
NSMCE1-208ENST00000565070 FHOD3Q2V2M9 1422 aa19.85■□□□□ 0.77
NSMCE1-208ENST00000565070 P3H3Q8IVL6 736 aa19.84■□□□□ 0.77
NSMCE1-208ENST00000565070 ARHGEF11O15085 1522 aa19.84■□□□□ 0.77
NSMCE1-208ENST00000565070 ARAP1Q96P48 1450 aa19.83■□□□□ 0.77
NSMCE1-208ENST00000565070 FMN1Q68DA7 1419 aa19.82■□□□□ 0.76
NSMCE1-208ENST00000565070 PTPRGP23470 1445 aa19.8■□□□□ 0.76
NSMCE1-208ENST00000565070 RIMBP3CA6NJZ7 1639 aa19.79■□□□□ 0.76
NSMCE1-208ENST00000565070 RIMBP3BA6NNM3 1639 aa19.79■□□□□ 0.76
NSMCE1-208ENST00000565070 RIMBP3Q9UFD9 1639 aa19.79■□□□□ 0.76
NSMCE1-208ENST00000565070 VPS8Q8N3P4 1428 aa19.76■□□□□ 0.75
NSMCE1-208ENST00000565070 TTBK1Q5TCY1 1321 aaPredicted RBP19.72■□□□□ 0.75
NSMCE1-208ENST00000565070 RAPGEF6Q8TEU7 1601 aa19.7■□□□□ 0.74
NSMCE1-208ENST00000565070 DNAJC5Q9H3Z4 198 aa19.7■□□□□ 0.74
NSMCE1-208ENST00000565070 ABCA8O94911 1581 aa19.7■□□□□ 0.74
NSMCE1-208ENST00000565070 CASKIN1Q8WXD9 1431 aa19.69■□□□□ 0.74
NSMCE1-208ENST00000565070 FYCO1Q9BQS8 1478 aa19.69■□□□□ 0.74
NSMCE1-208ENST00000565070 PCF11O94913 1555 aaKnown RBP19.69■□□□□ 0.74
NSMCE1-208ENST00000565070 UACAQ9BZF9 1416 aa19.68■□□□□ 0.74
NSMCE1-208ENST00000565070 HECW1Q76N89 1606 aa19.68■□□□□ 0.74
NSMCE1-208ENST00000565070 PLB1Q6P1J6 1458 aa19.67■□□□□ 0.74
NSMCE1-208ENST00000565070 UHRF1BP1LA0JNW5 1464 aa19.66■□□□□ 0.74
NSMCE1-208ENST00000565070 ABCC2Q92887 1545 aa19.65■□□□□ 0.74
NSMCE1-208ENST00000565070 HRCP23327 699 aa19.63■□□□□ 0.73
NSMCE1-208ENST00000565070 NUP153P49790 1475 aaKnown RBP19.6■□□□□ 0.73
NSMCE1-208ENST00000565070 ADCY10Q96PN6 1610 aa19.6■□□□□ 0.73
NSMCE1-208ENST00000565070 CYB5RLQ6IPT4 315 aa19.6■□□□□ 0.73
NSMCE1-208ENST00000565070 CCDC18Q5T9S5 1454 aa19.6■□□□□ 0.73
NSMCE1-208ENST00000565070 ATP1B4Q9UN42 357 aaPredicted RBP19.59■□□□□ 0.73
NSMCE1-208ENST00000565070 APLP2Q06481 763 aa19.56■□□□□ 0.72
NSMCE1-208ENST00000565070 PPARGC1BQ86YN6 1023 aaKnown RBP19.56■□□□□ 0.72
NSMCE1-208ENST00000565070 EPRSP07814 1512 aaKnown RBP19.56■□□□□ 0.72
NSMCE1-208ENST00000565070 MAP3K1Q13233 1512 aa19.55■□□□□ 0.72
NSMCE1-208ENST00000565070 LRRIQ1Q96JM4 1722 aa19.55■□□□□ 0.72
NSMCE1-208ENST00000565070 KDM5BQ9UGL1 1544 aa19.55■□□□□ 0.72
NSMCE1-208ENST00000565070 CFAP43Q8NDM7 1665 aa19.53■□□□□ 0.72
NSMCE1-208ENST00000565070 ZCCHC11Q5TAX3 1644 aaKnown RBP19.52■□□□□ 0.71
NSMCE1-208ENST00000565070 NPM1P06748 294 aaKnown RBP eCLIP19.52■□□□□ 0.71
NSMCE1-208ENST00000565070 ATP10BO94823 1461 aa19.51■□□□□ 0.71
NSMCE1-208ENST00000565070 TIAM1Q13009 1591 aa19.51■□□□□ 0.71
NSMCE1-208ENST00000565070 CDK13Q14004 1512 aaKnown RBP19.5■□□□□ 0.71
NSMCE1-208ENST00000565070 CDK11AQ9UQ88 783 aaPredicted RBP19.5■□□□□ 0.71
NSMCE1-208ENST00000565070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.48■□□□□ 0.71
NSMCE1-208ENST00000565070 HNRNPUL2Q1KMD3 747 aaKnown RBP19.48■□□□□ 0.71
NSMCE1-208ENST00000565070 ARID3CA6NKF2 412 aa19.47■□□□□ 0.71
NSMCE1-208ENST00000565070 PLEKHD1A6NEE1 506 aa19.42■□□□□ 0.7
NSMCE1-208ENST00000565070 MAPKBP1O60336 1514 aa19.42■□□□□ 0.7
NSMCE1-208ENST00000565070 EHBP1L1Q8N3D4 1523 aa19.42■□□□□ 0.7
NSMCE1-208ENST00000565070 MTUS2Q5JR59 1369 aa19.41■□□□□ 0.7
NSMCE1-208ENST00000565070 LRRC9Q6ZRR7 1453 aa19.41■□□□□ 0.7
NSMCE1-208ENST00000565070 KANK4Q5T7N3 995 aaPredicted RBP19.41■□□□□ 0.7
NSMCE1-208ENST00000565070 TROQ12816 1431 aaPredicted RBP19.39■□□□□ 0.69
NSMCE1-208ENST00000565070 WDR7Q9Y4E6 1490 aa19.38■□□□□ 0.69
NSMCE1-208ENST00000565070 ASXL2Q76L83 1435 aa19.38■□□□□ 0.69
NSMCE1-208ENST00000565070 MAGI3Q5TCQ9 1506 aa19.37■□□□□ 0.69
NSMCE1-208ENST00000565070 SUPT6HQ7KZ85 1726 aaKnown RBP19.35■□□□□ 0.69
NSMCE1-208ENST00000565070 KIF14Q15058 1648 aa19.34■□□□□ 0.69
NSMCE1-208ENST00000565070 NCOA2Q15596 1464 aa19.27■□□□□ 0.68
NSMCE1-208ENST00000565070 KCNH8Q96L42 1107 aa19.26■□□□□ 0.67
NSMCE1-208ENST00000565070 ABCA9Q8IUA7 1624 aa19.24■□□□□ 0.67
NSMCE1-208ENST00000565070 ZEB1P37275 1124 aaPredicted RBP19.24■□□□□ 0.67
NSMCE1-208ENST00000565070 GLI2P10070 1586 aa19.23■□□□□ 0.67
NSMCE1-208ENST00000565070 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.23■□□□□ 0.67
NSMCE1-208ENST00000565070 ABCC10Q5T3U5 1492 aa19.23■□□□□ 0.67
NSMCE1-208ENST00000565070 DIP2BQ9P265 1576 aa19.22■□□□□ 0.67
NSMCE1-208ENST00000565070 ITSN2Q9NZM3 1697 aa19.22■□□□□ 0.67
NSMCE1-208ENST00000565070 CCNB3Q8WWL7 1395 aa19.21■□□□□ 0.67
NSMCE1-208ENST00000565070 TTC37Q6PGP7 1564 aa19.21■□□□□ 0.67
NSMCE1-208ENST00000565070 MYO5CQ9NQX4 1742 aa19.2■□□□□ 0.66
NSMCE1-208ENST00000565070 MYOM3Q5VTT5 1437 aa19.18■□□□□ 0.66
NSMCE1-208ENST00000565070 PHLDB1Q86UU1 1377 aa19.17■□□□□ 0.66
NSMCE1-208ENST00000565070 CDC42BPAQ5VT25 1732 aa19.17■□□□□ 0.66
NSMCE1-208ENST00000565070 RRBP1Q9P2E9 1410 aaKnown RBP19.17■□□□□ 0.66
NSMCE1-208ENST00000565070 PREX2Q70Z35 1606 aa19.16■□□□□ 0.66
NSMCE1-208ENST00000565070 KIF13AQ9H1H9 1805 aa19.16■□□□□ 0.66
NSMCE1-208ENST00000565070 MAP3K4Q9Y6R4 1608 aa19.16■□□□□ 0.66
NSMCE1-208ENST00000565070 ARAP3Q8WWN8 1544 aa19.16■□□□□ 0.66
NSMCE1-208ENST00000565070 FAM69CQ0P6D2 419 aa19.16■□□□□ 0.66
NSMCE1-208ENST00000565070 GPATCH8Q9UKJ3 1502 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms