RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 PRG4Q92954 1404 aaPredicted RBP17.39■□□□□ 0.38
CMTM3-209ENST00000565003 JPH4Q96JJ6 628 aa17.37■□□□□ 0.37
CMTM3-209ENST00000565003 KIAA0586Q9BVV6 1533 aa17.33■□□□□ 0.37
CMTM3-209ENST00000565003 CARMIL1Q5VZK9 1371 aa17.32■□□□□ 0.36
CMTM3-209ENST00000565003 AEBP2Q6ZN18 517 aaPredicted RBP17.24■□□□□ 0.35
CMTM3-209ENST00000565003 IQGAP2Q13576 1575 aa17.19■□□□□ 0.34
CMTM3-209ENST00000565003 RAPGEF2Q9Y4G8 1499 aa17.19■□□□□ 0.34
CMTM3-209ENST00000565003 ADCY10Q96PN6 1610 aa17.19■□□□□ 0.34
CMTM3-209ENST00000565003 KIF13AQ9H1H9 1805 aa17.13■□□□□ 0.33
CMTM3-209ENST00000565003 PTPRGP23470 1445 aa17.13■□□□□ 0.33
CMTM3-209ENST00000565003 CARMIL2Q6F5E8 1435 aa17.13■□□□□ 0.33
CMTM3-209ENST00000565003 TNIKQ9UKE5 1360 aa17.12■□□□□ 0.33
CMTM3-209ENST00000565003 MAPKBP1O60336 1514 aa17.11■□□□□ 0.33
CMTM3-209ENST00000565003 DISP1Q96F81 1524 aa17.11■□□□□ 0.33
CMTM3-209ENST00000565003 TTBK1Q5TCY1 1321 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-209ENST00000565003 UGGT2Q9NYU1 1516 aa17.1■□□□□ 0.33
CMTM3-209ENST00000565003 NPM1P06748 294 aaKnown RBP eCLIP17.09■□□□□ 0.33
CMTM3-209ENST00000565003 ABCC10Q5T3U5 1492 aa17.09■□□□□ 0.33
CMTM3-209ENST00000565003 PRXQ9BXM0 1461 aa17.08■□□□□ 0.32
CMTM3-209ENST00000565003 DIP2BQ9P265 1576 aa17.06■□□□□ 0.32
CMTM3-209ENST00000565003 CTTNBP2Q8WZ74 1663 aa17.05■□□□□ 0.32
CMTM3-209ENST00000565003 KIAA0556O60303 1618 aa17.05■□□□□ 0.32
CMTM3-209ENST00000565003 FAM69CQ0P6D2 419 aa17.04■□□□□ 0.32
CMTM3-209ENST00000565003 ABCC2Q92887 1545 aa17.03■□□□□ 0.32
CMTM3-209ENST00000565003 UACAQ9BZF9 1416 aa17.02■□□□□ 0.31
CMTM3-209ENST00000565003 UHRF1BP1LA0JNW5 1464 aa17.01■□□□□ 0.31
CMTM3-209ENST00000565003 ASXL2Q76L83 1435 aa16.96■□□□□ 0.3
CMTM3-209ENST00000565003 CSRNP3Q8WYN3 585 aa16.95■□□□□ 0.3
CMTM3-209ENST00000565003 KDM5BQ9UGL1 1544 aa16.95■□□□□ 0.3
CMTM3-209ENST00000565003 GOLGA3Q08378 1498 aa16.94■□□□□ 0.3
CMTM3-209ENST00000565003 PLB1Q6P1J6 1458 aa16.93■□□□□ 0.3
CMTM3-209ENST00000565003 ZCCHC11Q5TAX3 1644 aaKnown RBP16.92■□□□□ 0.3
CMTM3-209ENST00000565003 TSPOAP1O95153 1857 aa16.91■□□□□ 0.3
CMTM3-209ENST00000565003 EEA1Q15075 1411 aa16.91■□□□□ 0.3
CMTM3-209ENST00000565003 ABCA8O94911 1581 aa16.89■□□□□ 0.29
CMTM3-209ENST00000565003 GLI2P10070 1586 aa16.89■□□□□ 0.29
CMTM3-209ENST00000565003 EPRSP07814 1512 aaKnown RBP16.86■□□□□ 0.29
CMTM3-209ENST00000565003 FAM9AQ8IZU1 332 aaPredicted RBP16.85■□□□□ 0.29
CMTM3-209ENST00000565003 KDM6BO15054 1643 aa16.85■□□□□ 0.29
CMTM3-209ENST00000565003 PPRC1Q5VV67 1664 aaKnown RBP16.85■□□□□ 0.29
CMTM3-209ENST00000565003 SAMD9Q5K651 1589 aa16.84■□□□□ 0.29
CMTM3-209ENST00000565003 WDR7Q9Y4E6 1490 aa16.82■□□□□ 0.28
CMTM3-209ENST00000565003 P3H3Q8IVL6 736 aa16.82■□□□□ 0.28
CMTM3-209ENST00000565003 MAP3K4Q9Y6R4 1608 aa16.81■□□□□ 0.28
CMTM3-209ENST00000565003 CHIC1Q5VXU3 224 aa16.8■□□□□ 0.28
CMTM3-209ENST00000565003 KIF21BO75037 1637 aa16.79■□□□□ 0.28
CMTM3-209ENST00000565003 RANGAP1P46060 587 aaPredicted RBP16.74■□□□□ 0.27
CMTM3-209ENST00000565003 ARID3CA6NKF2 412 aa16.73■□□□□ 0.27
CMTM3-209ENST00000565003 ATP10BO94823 1461 aa16.73■□□□□ 0.27
CMTM3-209ENST00000565003 TEX14Q8IWB6 1497 aa16.73■□□□□ 0.27
CMTM3-209ENST00000565003 COL17A1Q9UMD9 1497 aaPredicted RBP16.73■□□□□ 0.27
CMTM3-209ENST00000565003 FHOD3Q2V2M9 1422 aa16.72■□□□□ 0.27
CMTM3-209ENST00000565003 RAPGEF6Q8TEU7 1601 aa16.72■□□□□ 0.27
CMTM3-209ENST00000565003 KCNH8Q96L42 1107 aa16.7■□□□□ 0.26
CMTM3-209ENST00000565003 CFAP43Q8NDM7 1665 aa16.69■□□□□ 0.26
CMTM3-209ENST00000565003 EFCAB5A4FU69 1503 aa16.68■□□□□ 0.26
CMTM3-209ENST00000565003 CD109Q6YHK3 1445 aa16.68■□□□□ 0.26
CMTM3-209ENST00000565003 NUP153P49790 1475 aaKnown RBP16.67■□□□□ 0.26
CMTM3-209ENST00000565003 MAGI3Q5TCQ9 1506 aa16.67■□□□□ 0.26
CMTM3-209ENST00000565003 EHMT2Q96KQ7 1210 aa16.67■□□□□ 0.26
CMTM3-209ENST00000565003 UBTFP17480 764 aaKnown RBP16.62■□□□□ 0.25
CMTM3-209ENST00000565003 ABCA9Q8IUA7 1624 aa16.62■□□□□ 0.25
CMTM3-209ENST00000565003 KDM4FA0A1W2PPD8 638 aa16.61■□□□□ 0.25
CMTM3-209ENST00000565003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.6■□□□□ 0.25
CMTM3-209ENST00000565003 HNRNPUL2Q1KMD3 747 aaKnown RBP16.6■□□□□ 0.25
CMTM3-209ENST00000565003 ARHGAP35Q9NRY4 1499 aa16.58■□□□□ 0.24
CMTM3-209ENST00000565003 CDK13Q14004 1512 aaKnown RBP16.54■□□□□ 0.24
CMTM3-209ENST00000565003 ARAP3Q8WWN8 1544 aa16.54■□□□□ 0.24
CMTM3-209ENST00000565003 ADGRL1O94910 1474 aa16.53■□□□□ 0.24
CMTM3-209ENST00000565003 PLEKHD1A6NEE1 506 aa16.52■□□□□ 0.24
CMTM3-209ENST00000565003 FMN1Q68DA7 1419 aa16.51■□□□□ 0.23
CMTM3-209ENST00000565003 HECW1Q76N89 1606 aa16.5■□□□□ 0.23
CMTM3-209ENST00000565003 NEO1Q92859 1461 aa16.49■□□□□ 0.23
CMTM3-209ENST00000565003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.49■□□□□ 0.23
CMTM3-209ENST00000565003 PHLDB1Q86UU1 1377 aa16.49■□□□□ 0.23
CMTM3-209ENST00000565003 TTC37Q6PGP7 1564 aa16.48■□□□□ 0.23
CMTM3-209ENST00000565003 ATP1B4Q9UN42 357 aaPredicted RBP16.45■□□□□ 0.22
CMTM3-209ENST00000565003 FRMPD1Q5SYB0 1578 aa16.45■□□□□ 0.22
CMTM3-209ENST00000565003 RAPGEF3O95398 923 aa16.44■□□□□ 0.22
CMTM3-209ENST00000565003 FANCAO15360 1455 aa16.42■□□□□ 0.22
CMTM3-209ENST00000565003 LRRIQ1Q96JM4 1722 aa16.42■□□□□ 0.22
CMTM3-209ENST00000565003 PCF11O94913 1555 aaKnown RBP16.4■□□□□ 0.22
CMTM3-209ENST00000565003 CFAP74Q9C0B2 1584 aa16.4■□□□□ 0.22
CMTM3-209ENST00000565003 AKNAQ7Z591 1439 aa16.4■□□□□ 0.22
CMTM3-209ENST00000565003 KIF14Q15058 1648 aa16.38■□□□□ 0.21
CMTM3-209ENST00000565003 DENND4BO75064 1496 aaPredicted RBP16.38■□□□□ 0.21
CMTM3-209ENST00000565003 RICTORQ6R327 1708 aa16.38■□□□□ 0.21
CMTM3-209ENST00000565003 PLCH2O75038 1416 aa16.36■□□□□ 0.21
CMTM3-209ENST00000565003 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
CMTM3-209ENST00000565003 CASKIN1Q8WXD9 1431 aa16.36■□□□□ 0.21
CMTM3-209ENST00000565003 CDK11AQ9UQ88 783 aaPredicted RBP16.36■□□□□ 0.21
CMTM3-209ENST00000565003 CLIP1P30622 1438 aa16.36■□□□□ 0.21
CMTM3-209ENST00000565003 MYO5CQ9NQX4 1742 aa16.34■□□□□ 0.21
CMTM3-209ENST00000565003 ARHGEF40Q8TER5 1519 aa16.34■□□□□ 0.21
CMTM3-209ENST00000565003 ZMYM4Q5VZL5 1548 aa16.33■□□□□ 0.2
CMTM3-209ENST00000565003 CCDC18Q5T9S5 1454 aa16.32■□□□□ 0.2
CMTM3-209ENST00000565003 FYCO1Q9BQS8 1478 aa16.32■□□□□ 0.2
CMTM3-209ENST00000565003 POGZQ7Z3K3 1410 aa16.3■□□□□ 0.2
CMTM3-209ENST00000565003 SCAPERQ9BY12 1400 aa16.3■□□□□ 0.2
CMTM3-209ENST00000565003 YEATS2Q9ULM3 1422 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms