RNA–Protein interactions for RNA: ENST00000564903.1

COX4I1-208, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 2 BASIC

Gene COX4I1, Length 1,481 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-208ENST00000564903 CEP170Q5SW79 1584 aa23■■□□□ 1.27
COX4I1-208ENST00000564903 KIAA0586Q9BVV6 1533 aa22.92■■□□□ 1.26
COX4I1-208ENST00000564903 CLASP1Q7Z460 1538 aa22.9■■□□□ 1.26
COX4I1-208ENST00000564903 RANGAP1P46060 587 aaPredicted RBP22.89■■□□□ 1.25
COX4I1-208ENST00000564903 JPH4Q96JJ6 628 aa22.87■■□□□ 1.25
COX4I1-208ENST00000564903 IQGAP2Q13576 1575 aa22.83■■□□□ 1.24
COX4I1-208ENST00000564903 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
COX4I1-208ENST00000564903 CTTNBP2Q8WZ74 1663 aa22.79■■□□□ 1.24
COX4I1-208ENST00000564903 PRG4Q92954 1404 aaPredicted RBP22.76■■□□□ 1.23
COX4I1-208ENST00000564903 P3H3Q8IVL6 736 aa22.73■■□□□ 1.23
COX4I1-208ENST00000564903 SHROOM2Q13796 1616 aa22.72■■□□□ 1.23
COX4I1-208ENST00000564903 UGGT2Q9NYU1 1516 aa22.71■■□□□ 1.23
COX4I1-208ENST00000564903 DNAJC5Q9H3Z4 198 aa22.71■■□□□ 1.23
COX4I1-208ENST00000564903 ERCC6L2Q5T890 1561 aa22.69■■□□□ 1.22
COX4I1-208ENST00000564903 CARMIL2Q6F5E8 1435 aa22.68■■□□□ 1.22
COX4I1-208ENST00000564903 TTBK1Q5TCY1 1321 aaPredicted RBP22.67■■□□□ 1.22
COX4I1-208ENST00000564903 DISP1Q96F81 1524 aa22.67■■□□□ 1.22
COX4I1-208ENST00000564903 ARHGEF11O15085 1522 aa22.65■■□□□ 1.22
COX4I1-208ENST00000564903 CEP162Q5TB80 1403 aa22.65■■□□□ 1.22
COX4I1-208ENST00000564903 CLIP1P30622 1438 aa22.64■■□□□ 1.21
COX4I1-208ENST00000564903 KIAA0556O60303 1618 aa22.61■■□□□ 1.21
COX4I1-208ENST00000564903 ARHGAP35Q9NRY4 1499 aa22.6■■□□□ 1.21
COX4I1-208ENST00000564903 FHOD3Q2V2M9 1422 aa22.59■■□□□ 1.21
COX4I1-208ENST00000564903 SAMD9Q5K651 1589 aa22.58■■□□□ 1.21
COX4I1-208ENST00000564903 RIMBP3CA6NJZ7 1639 aa22.58■■□□□ 1.2
COX4I1-208ENST00000564903 RIMBP3BA6NNM3 1639 aa22.58■■□□□ 1.2
COX4I1-208ENST00000564903 RIMBP3Q9UFD9 1639 aa22.58■■□□□ 1.2
COX4I1-208ENST00000564903 EFCAB5A4FU69 1503 aa22.58■■□□□ 1.2
COX4I1-208ENST00000564903 PTPRGP23470 1445 aa22.55■■□□□ 1.2
COX4I1-208ENST00000564903 CYB5RLQ6IPT4 315 aa22.53■■□□□ 1.2
COX4I1-208ENST00000564903 ARAP1Q96P48 1450 aa22.52■■□□□ 1.2
COX4I1-208ENST00000564903 FMN1Q68DA7 1419 aa22.41■■□□□ 1.18
COX4I1-208ENST00000564903 PLB1Q6P1J6 1458 aa22.41■■□□□ 1.18
COX4I1-208ENST00000564903 UACAQ9BZF9 1416 aa22.4■■□□□ 1.18
COX4I1-208ENST00000564903 ATP1B4Q9UN42 357 aaPredicted RBP22.4■■□□□ 1.18
COX4I1-208ENST00000564903 ARID3CA6NKF2 412 aa22.36■■□□□ 1.17
COX4I1-208ENST00000564903 ABCA8O94911 1581 aa22.33■■□□□ 1.17
COX4I1-208ENST00000564903 VPS8Q8N3P4 1428 aa22.32■■□□□ 1.16
COX4I1-208ENST00000564903 ABCC2Q92887 1545 aa22.3■■□□□ 1.16
COX4I1-208ENST00000564903 UHRF1BP1LA0JNW5 1464 aa22.3■■□□□ 1.16
COX4I1-208ENST00000564903 RAPGEF6Q8TEU7 1601 aa22.29■■□□□ 1.16
COX4I1-208ENST00000564903 CASKIN1Q8WXD9 1431 aa22.29■■□□□ 1.16
COX4I1-208ENST00000564903 ADCY10Q96PN6 1610 aa22.28■■□□□ 1.16
COX4I1-208ENST00000564903 NPM1P06748 294 aaKnown RBP eCLIP22.28■■□□□ 1.16
COX4I1-208ENST00000564903 NUP153P49790 1475 aaKnown RBP22.27■■□□□ 1.16
COX4I1-208ENST00000564903 PCF11O94913 1555 aaKnown RBP22.27■■□□□ 1.16
COX4I1-208ENST00000564903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.26■■□□□ 1.15
COX4I1-208ENST00000564903 HNRNPUL2Q1KMD3 747 aaKnown RBP22.26■■□□□ 1.15
COX4I1-208ENST00000564903 FYCO1Q9BQS8 1478 aa22.24■■□□□ 1.15
COX4I1-208ENST00000564903 ATP10BO94823 1461 aa22.21■■□□□ 1.15
COX4I1-208ENST00000564903 HECW1Q76N89 1606 aa22.21■■□□□ 1.15
COX4I1-208ENST00000564903 KDM5BQ9UGL1 1544 aa22.19■■□□□ 1.14
COX4I1-208ENST00000564903 EPRSP07814 1512 aaKnown RBP22.18■■□□□ 1.14
COX4I1-208ENST00000564903 CDK13Q14004 1512 aaKnown RBP22.18■■□□□ 1.14
COX4I1-208ENST00000564903 APLP2Q06481 763 aa22.15■■□□□ 1.14
COX4I1-208ENST00000564903 ZCCHC11Q5TAX3 1644 aaKnown RBP22.13■■□□□ 1.13
COX4I1-208ENST00000564903 CCDC18Q5T9S5 1454 aa22.12■■□□□ 1.13
COX4I1-208ENST00000564903 PLEKHD1A6NEE1 506 aa22.1■■□□□ 1.13
COX4I1-208ENST00000564903 ASXL2Q76L83 1435 aa22.1■■□□□ 1.13
COX4I1-208ENST00000564903 CDK11AQ9UQ88 783 aaPredicted RBP22.09■■□□□ 1.13
COX4I1-208ENST00000564903 LRRIQ1Q96JM4 1722 aa22.07■■□□□ 1.12
COX4I1-208ENST00000564903 KCNH8Q96L42 1107 aa22.07■■□□□ 1.12
COX4I1-208ENST00000564903 KANK4Q5T7N3 995 aaPredicted RBP22.04■■□□□ 1.12
COX4I1-208ENST00000564903 TIAM1Q13009 1591 aa22.03■■□□□ 1.12
COX4I1-208ENST00000564903 MAPKBP1O60336 1514 aa22.03■■□□□ 1.12
COX4I1-208ENST00000564903 WDR7Q9Y4E6 1490 aa22.03■■□□□ 1.12
COX4I1-208ENST00000564903 MTUS2Q5JR59 1369 aa22.02■■□□□ 1.12
COX4I1-208ENST00000564903 PPARGC1BQ86YN6 1023 aaKnown RBP22.02■■□□□ 1.12
COX4I1-208ENST00000564903 MAGI3Q5TCQ9 1506 aa22.01■■□□□ 1.11
COX4I1-208ENST00000564903 MAP3K1Q13233 1512 aa22■■□□□ 1.11
COX4I1-208ENST00000564903 TROQ12816 1431 aaPredicted RBP21.99■■□□□ 1.11
COX4I1-208ENST00000564903 CFAP43Q8NDM7 1665 aa21.97■■□□□ 1.11
COX4I1-208ENST00000564903 LRRC9Q6ZRR7 1453 aa21.97■■□□□ 1.11
COX4I1-208ENST00000564903 FAM69CQ0P6D2 419 aa21.96■■□□□ 1.11
COX4I1-208ENST00000564903 TRHP20396 242 aaPredicted RBP21.95■■□□□ 1.1
COX4I1-208ENST00000564903 ABCC10Q5T3U5 1492 aa21.92■■□□□ 1.1
COX4I1-208ENST00000564903 EHBP1L1Q8N3D4 1523 aa21.91■■□□□ 1.1
COX4I1-208ENST00000564903 KIF14Q15058 1648 aa21.87■■□□□ 1.09
COX4I1-208ENST00000564903 DIP2BQ9P265 1576 aa21.86■■□□□ 1.09
COX4I1-208ENST00000564903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.85■■□□□ 1.092e-6■□□□□ 8.8
COX4I1-208ENST00000564903 NCOA2Q15596 1464 aa21.83■■□□□ 1.09
COX4I1-208ENST00000564903 GLI2P10070 1586 aa21.81■■□□□ 1.08
COX4I1-208ENST00000564903 CD109Q6YHK3 1445 aa21.81■■□□□ 1.08
COX4I1-208ENST00000564903 CCNB3Q8WWL7 1395 aa21.81■■□□□ 1.08
COX4I1-208ENST00000564903 TTC37Q6PGP7 1564 aa21.8■■□□□ 1.08
COX4I1-208ENST00000564903 SUPT6HQ7KZ85 1726 aaKnown RBP21.79■■□□□ 1.08
COX4I1-208ENST00000564903 ABCA9Q8IUA7 1624 aa21.78■■□□□ 1.08
COX4I1-208ENST00000564903 PHLDB1Q86UU1 1377 aa21.77■■□□□ 1.08
COX4I1-208ENST00000564903 GPATCH8Q9UKJ3 1502 aaKnown RBP21.75■■□□□ 1.07
COX4I1-208ENST00000564903 PLCH2O75038 1416 aa21.75■■□□□ 1.07
COX4I1-208ENST00000564903 KIF13AQ9H1H9 1805 aa21.73■■□□□ 1.07
COX4I1-208ENST00000564903 CFDP1Q9UEE9 299 aaPredicted RBP21.73■■□□□ 1.07
COX4I1-208ENST00000564903 MAP3K4Q9Y6R4 1608 aa21.72■■□□□ 1.07
COX4I1-208ENST00000564903 ZNF777Q9ULD5 760 aaPredicted RBP21.72■■□□□ 1.07
COX4I1-208ENST00000564903 MYOM3Q5VTT5 1437 aa21.7■■□□□ 1.06
COX4I1-208ENST00000564903 EFCAB2Q5VUJ9 269 aa21.7■■□□□ 1.06
COX4I1-208ENST00000564903 ARHGAP5Q13017 1502 aa21.69■■□□□ 1.06
COX4I1-208ENST00000564903 FANCAO15360 1455 aa21.66■■□□□ 1.06
COX4I1-208ENST00000564903 ZNF644Q9H582 1327 aaPredicted RBP21.66■■□□□ 1.06
COX4I1-208ENST00000564903 MYO5CQ9NQX4 1742 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms