RNA–Protein interactions for RNA: ENST00000564865.5

PKD1-228, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 480 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-228ENST00000564865 SHROOM2Q13796 1616 aa23.11■■□□□ 1.29
PKD1-228ENST00000564865 PRG4Q92954 1404 aaPredicted RBP23.09■■□□□ 1.29
PKD1-228ENST00000564865 KIAA0586Q9BVV6 1533 aa23.09■■□□□ 1.29
PKD1-228ENST00000564865 RAPGEF2Q9Y4G8 1499 aa23.09■■□□□ 1.29
PKD1-228ENST00000564865 CHIC1Q5VXU3 224 aa23.07■■□□□ 1.28
PKD1-228ENST00000564865 CSRNP3Q8WYN3 585 aa23■■□□□ 1.27
PKD1-228ENST00000564865 FAM9AQ8IZU1 332 aaPredicted RBP22.99■■□□□ 1.27
PKD1-228ENST00000564865 PRXQ9BXM0 1461 aa22.96■■□□□ 1.27
PKD1-228ENST00000564865 IQGAP2Q13576 1575 aa22.94■■□□□ 1.26
PKD1-228ENST00000564865 EEA1Q15075 1411 aa22.93■■□□□ 1.26
PKD1-228ENST00000564865 TRHP20396 242 aaPredicted RBP22.89■■□□□ 1.25
PKD1-228ENST00000564865 TTBK1Q5TCY1 1321 aaPredicted RBP22.88■■□□□ 1.25
PKD1-228ENST00000564865 CARMIL2Q6F5E8 1435 aa22.88■■□□□ 1.25
PKD1-228ENST00000564865 CTTNBP2Q8WZ74 1663 aa22.82■■□□□ 1.24
PKD1-228ENST00000564865 PTPRGP23470 1445 aa22.82■■□□□ 1.24
PKD1-228ENST00000564865 TNIKQ9UKE5 1360 aa22.81■■□□□ 1.24
PKD1-228ENST00000564865 UGGT2Q9NYU1 1516 aa22.81■■□□□ 1.24
PKD1-228ENST00000564865 DISP1Q96F81 1524 aa22.8■■□□□ 1.24
PKD1-228ENST00000564865 NPM1P06748 294 aaKnown RBP eCLIP22.76■■□□□ 1.23
PKD1-228ENST00000564865 EHMT2Q96KQ7 1210 aa22.74■■□□□ 1.23
PKD1-228ENST00000564865 KIAA0556O60303 1618 aa22.72■■□□□ 1.23
PKD1-228ENST00000564865 ADCY10Q96PN6 1610 aa22.71■■□□□ 1.23
PKD1-228ENST00000564865 GOLGA3Q08378 1498 aa22.7■■□□□ 1.22
PKD1-228ENST00000564865 KIF21BO75037 1637 aa22.69■■□□□ 1.22
PKD1-228ENST00000564865 RANGAP1P46060 587 aaPredicted RBP22.68■■□□□ 1.22
PKD1-228ENST00000564865 P3H3Q8IVL6 736 aa22.67■■□□□ 1.22
PKD1-228ENST00000564865 UACAQ9BZF9 1416 aa22.64■■□□□ 1.21
PKD1-228ENST00000564865 UBTFP17480 764 aaKnown RBP22.63■■□□□ 1.21
PKD1-228ENST00000564865 UHRF1BP1LA0JNW5 1464 aa22.58■■□□□ 1.2
PKD1-228ENST00000564865 ABCC2Q92887 1545 aa22.57■■□□□ 1.2
PKD1-228ENST00000564865 MAPKBP1O60336 1514 aa22.56■■□□□ 1.2
PKD1-228ENST00000564865 PLB1Q6P1J6 1458 aa22.54■■□□□ 1.2
PKD1-228ENST00000564865 FAM69CQ0P6D2 419 aa22.53■■□□□ 1.2
PKD1-228ENST00000564865 SAMD9Q5K651 1589 aa22.53■■□□□ 1.2
PKD1-228ENST00000564865 ABCC10Q5T3U5 1492 aa22.5■■□□□ 1.19
PKD1-228ENST00000564865 KDM5BQ9UGL1 1544 aa22.48■■□□□ 1.19
PKD1-228ENST00000564865 ABCA8O94911 1581 aa22.48■■□□□ 1.19
PKD1-228ENST00000564865 KIF13AQ9H1H9 1805 aa22.47■■□□□ 1.19
PKD1-228ENST00000564865 FHOD3Q2V2M9 1422 aa22.47■■□□□ 1.19
PKD1-228ENST00000564865 ASXL2Q76L83 1435 aa22.47■■□□□ 1.19
PKD1-228ENST00000564865 ZCCHC11Q5TAX3 1644 aaKnown RBP22.45■■□□□ 1.18
PKD1-228ENST00000564865 ARID3CA6NKF2 412 aa22.44■■□□□ 1.18
PKD1-228ENST00000564865 DIP2BQ9P265 1576 aa22.44■■□□□ 1.18
PKD1-228ENST00000564865 EFCAB5A4FU69 1503 aa22.42■■□□□ 1.18
PKD1-228ENST00000564865 RAPGEF6Q8TEU7 1601 aa22.35■■□□□ 1.17
PKD1-228ENST00000564865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.34■■□□□ 1.17
PKD1-228ENST00000564865 HNRNPUL2Q1KMD3 747 aaKnown RBP22.34■■□□□ 1.17
PKD1-228ENST00000564865 ARHGAP35Q9NRY4 1499 aa22.34■■□□□ 1.17
PKD1-228ENST00000564865 KCNH8Q96L42 1107 aa22.33■■□□□ 1.17
PKD1-228ENST00000564865 ATP10BO94823 1461 aa22.33■■□□□ 1.16
PKD1-228ENST00000564865 EPRSP07814 1512 aaKnown RBP22.32■■□□□ 1.16
PKD1-228ENST00000564865 WDR7Q9Y4E6 1490 aa22.32■■□□□ 1.16
PKD1-228ENST00000564865 GLI2P10070 1586 aa22.29■■□□□ 1.16
PKD1-228ENST00000564865 TSPOAP1O95153 1857 aa22.28■■□□□ 1.16
PKD1-228ENST00000564865 NUP153P49790 1475 aaKnown RBP22.28■■□□□ 1.16
PKD1-228ENST00000564865 ATP1B4Q9UN42 357 aaPredicted RBP22.27■■□□□ 1.16
PKD1-228ENST00000564865 FMN1Q68DA7 1419 aa22.25■■□□□ 1.15
PKD1-228ENST00000564865 CLIP1P30622 1438 aa22.2■■□□□ 1.14
PKD1-228ENST00000564865 LOC105371045A0A1W2PR82 267 aa22.19■■□□□ 1.14
PKD1-228ENST00000564865 MAP3K4Q9Y6R4 1608 aa22.19■■□□□ 1.14
PKD1-228ENST00000564865 PLEKHD1A6NEE1 506 aa22.18■■□□□ 1.14
PKD1-228ENST00000564865 CD109Q6YHK3 1445 aa22.16■■□□□ 1.14
PKD1-228ENST00000564865 PPRC1Q5VV67 1664 aaKnown RBP22.16■■□□□ 1.14
PKD1-228ENST00000564865 CDK13Q14004 1512 aaKnown RBP22.14■■□□□ 1.13
PKD1-228ENST00000564865 HECW1Q76N89 1606 aa22.13■■□□□ 1.13
PKD1-228ENST00000564865 KDM6BO15054 1643 aa22.13■■□□□ 1.13
PKD1-228ENST00000564865 CFAP43Q8NDM7 1665 aa22.12■■□□□ 1.13
PKD1-228ENST00000564865 TEX14Q8IWB6 1497 aa22.12■■□□□ 1.13
PKD1-228ENST00000564865 CEP162Q5TB80 1403 aa22.07■■□□□ 1.12
PKD1-228ENST00000564865 MAGI3Q5TCQ9 1506 aa22.07■■□□□ 1.12
PKD1-228ENST00000564865 CASKIN1Q8WXD9 1431 aa22.06■■□□□ 1.12
PKD1-228ENST00000564865 CDK11AQ9UQ88 783 aaPredicted RBP22.06■■□□□ 1.12
PKD1-228ENST00000564865 ABCA9Q8IUA7 1624 aa22.06■■□□□ 1.12
PKD1-228ENST00000564865 PCF11O94913 1555 aaKnown RBP22.05■■□□□ 1.12
PKD1-228ENST00000564865 COL17A1Q9UMD9 1497 aaPredicted RBP22.02■■□□□ 1.12
PKD1-228ENST00000564865 LRRIQ1Q96JM4 1722 aa22■■□□□ 1.11
PKD1-228ENST00000564865 FYCO1Q9BQS8 1478 aa21.99■■□□□ 1.11
PKD1-228ENST00000564865 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.98■■□□□ 1.11
PKD1-228ENST00000564865 CCDC18Q5T9S5 1454 aa21.97■■□□□ 1.11
PKD1-228ENST00000564865 TROQ12816 1431 aaPredicted RBP21.95■■□□□ 1.1
PKD1-228ENST00000564865 TTC37Q6PGP7 1564 aa21.94■■□□□ 1.1
PKD1-228ENST00000564865 NEO1Q92859 1461 aa21.9■■□□□ 1.1
PKD1-228ENST00000564865 PHLDB1Q86UU1 1377 aa21.9■■□□□ 1.1
PKD1-228ENST00000564865 KIF14Q15058 1648 aa21.89■■□□□ 1.09
PKD1-228ENST00000564865 ARAP3Q8WWN8 1544 aa21.88■■□□□ 1.09
PKD1-228ENST00000564865 FANCAO15360 1455 aa21.86■■□□□ 1.09
PKD1-228ENST00000564865 RAPGEF3O95398 923 aa21.86■■□□□ 1.09
PKD1-228ENST00000564865 PLCH2O75038 1416 aa21.86■■□□□ 1.09
PKD1-228ENST00000564865 AKNAQ7Z591 1439 aa21.85■■□□□ 1.09
PKD1-228ENST00000564865 EFCAB2Q5VUJ9 269 aa21.82■■□□□ 1.08
PKD1-228ENST00000564865 CFAP74Q9C0B2 1584 aa21.82■■□□□ 1.08
PKD1-228ENST00000564865 VPS8Q8N3P4 1428 aa21.8■■□□□ 1.08
PKD1-228ENST00000564865 MYO5CQ9NQX4 1742 aa21.8■■□□□ 1.08
PKD1-228ENST00000564865 MTUS2Q5JR59 1369 aa21.79■■□□□ 1.08
PKD1-228ENST00000564865 AEBP2Q6ZN18 517 aaPredicted RBP21.78■■□□□ 1.08
PKD1-228ENST00000564865 DENND4BO75064 1496 aaPredicted RBP21.77■■□□□ 1.08
PKD1-228ENST00000564865 ARHGAP5Q13017 1502 aa21.77■■□□□ 1.08
PKD1-228ENST00000564865 ADGRL1O94910 1474 aa21.76■■□□□ 1.07
PKD1-228ENST00000564865 SCAPERQ9BY12 1400 aa21.74■■□□□ 1.07
PKD1-228ENST00000564865 FRMPD1Q5SYB0 1578 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms