RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PRXQ9BXM0 1461 aa28.87■■■□□ 2.21
MAP1LC3B-206ENST00000564844 MAPKBP1O60336 1514 aa28.86■■■□□ 2.21
MAP1LC3B-206ENST00000564844 HNRNPUQ00839 825 aaKnown RBP eCLIP28.8■■■□□ 2.2
MAP1LC3B-206ENST00000564844 ARHGAP35Q9NRY4 1499 aa28.8■■■□□ 2.2
MAP1LC3B-206ENST00000564844 SETD5Q9C0A6 1442 aa28.8■■■□□ 2.2
MAP1LC3B-206ENST00000564844 TOP2BQ02880 1626 aa28.77■■■□□ 2.2
MAP1LC3B-206ENST00000564844 ERICH6Q7L0X2 663 aa28.75■■■□□ 2.19
MAP1LC3B-206ENST00000564844 PHLDB1Q86UU1 1377 aa28.74■■■□□ 2.19
MAP1LC3B-206ENST00000564844 KIF27Q86VH2 1401 aa28.71■■■□□ 2.19
MAP1LC3B-206ENST00000564844 CUX2O14529 1486 aa28.69■■■□□ 2.18
MAP1LC3B-206ENST00000564844 ERICH3Q5RHP9 1530 aa28.67■■■□□ 2.18
MAP1LC3B-206ENST00000564844 CNGB1Q14028 1251 aaPredicted RBP28.67■■■□□ 2.18
MAP1LC3B-206ENST00000564844 PEG3Q9GZU2 1588 aa28.64■■■□□ 2.18
MAP1LC3B-206ENST00000564844 CCER2I3L3R5 266 aa28.63■■■□□ 2.17
MAP1LC3B-206ENST00000564844 CDK11AQ9UQ88 783 aaPredicted RBP28.63■■■□□ 2.17
MAP1LC3B-206ENST00000564844 CUX1P39880 1505 aa28.59■■■□□ 2.17
MAP1LC3B-206ENST00000564844 TONSLQ96HA7 1378 aa28.58■■■□□ 2.17
MAP1LC3B-206ENST00000564844 SENP3-EIF4A1A0A087X0R7 540 aa28.57■■■□□ 2.16
MAP1LC3B-206ENST00000564844 CCDC184Q52MB2 194 aa28.5■■■□□ 2.15
MAP1LC3B-206ENST00000564844 B4GALNT3Q6L9W6 998 aa28.5■■■□□ 2.15
MAP1LC3B-206ENST00000564844 FAM9BQ8IZU0 186 aa28.49■■■□□ 2.15
MAP1LC3B-206ENST00000564844 ARID3CA6NKF2 412 aa28.49■■■□□ 2.15
MAP1LC3B-206ENST00000564844 LRRC9Q6ZRR7 1453 aa28.48■■■□□ 2.15
MAP1LC3B-206ENST00000564844 BIVM-ERCC5R4GMW8 1640 aa28.46■■■□□ 2.15
MAP1LC3B-206ENST00000564844 IGF1RP08069 1367 aa28.45■■■□□ 2.15
MAP1LC3B-206ENST00000564844 TIAM1Q13009 1591 aa28.44■■■□□ 2.14
MAP1LC3B-206ENST00000564844 CARMIL1Q5VZK9 1371 aa28.41■■■□□ 2.14
MAP1LC3B-206ENST00000564844 NBR1Q14596 966 aa28.4■■■□□ 2.14
MAP1LC3B-206ENST00000564844 CHIC2Q9UKJ5 165 aa28.39■■■□□ 2.14
MAP1LC3B-206ENST00000564844 FHOD3Q2V2M9 1422 aa28.36■■■□□ 2.13
MAP1LC3B-206ENST00000564844 TIMELESSQ9UNS1 1208 aa28.35■■■□□ 2.13
MAP1LC3B-206ENST00000564844 HSPA5P11021 654 aaKnown RBP28.33■■■□□ 2.13
MAP1LC3B-206ENST00000564844 RRP7BPQ9NSQ0 103 aa28.33■■■□□ 2.13
MAP1LC3B-206ENST00000564844 FANCIQ9NVI1 1328 aa28.32■■■□□ 2.12
MAP1LC3B-206ENST00000564844 WASHC2AQ641Q2 1341 aa28.3■■■□□ 2.12
MAP1LC3B-206ENST00000564844 FOXD1Q16676 465 aa28.28■■■□□ 2.12
MAP1LC3B-206ENST00000564844 DEKP35659 375 aaKnown RBP28.26■■■□□ 2.11
MAP1LC3B-206ENST00000564844 POLR3GLQ9BT43 218 aa28.25■■■□□ 2.11
MAP1LC3B-206ENST00000564844 PPP4R2Q9NY27 417 aa28.25■■■□□ 2.11
MAP1LC3B-206ENST00000564844 MRS2Q9HD23 443 aa28.24■■■□□ 2.11
MAP1LC3B-206ENST00000564844 C11orf95C9JLR9 678 aaPredicted RBP28.2■■■□□ 2.1
MAP1LC3B-206ENST00000564844 PTPRKQ15262 1439 aa28.18■■■□□ 2.1
MAP1LC3B-206ENST00000564844 PAK3O75914 559 aaPredicted RBP28.18■■■□□ 2.1
MAP1LC3B-206ENST00000564844 CCDC18Q5T9S5 1454 aa28.18■■■□□ 2.1
MAP1LC3B-206ENST00000564844 PCF11O94913 1555 aaKnown RBP28.17■■■□□ 2.1
MAP1LC3B-206ENST00000564844 FHAD1B1AJZ9 1412 aa28.17■■■□□ 2.1
MAP1LC3B-206ENST00000564844 NCAPD3P42695 1498 aa28.16■■■□□ 2.1
MAP1LC3B-206ENST00000564844 MTUS2Q5JR59 1369 aa28.15■■■□□ 2.1
MAP1LC3B-206ENST00000564844 AQRO60306 1485 aaKnown RBP eCLIP28.15■■■□□ 2.14e-6■■■■■ 31
MAP1LC3B-206ENST00000564844 EIF4G2P78344 907 aaKnown RBP eCLIP28.12■■■□□ 2.09
MAP1LC3B-206ENST00000564844 DNAJC5BQ9UF47 199 aa28.11■■■□□ 2.09
MAP1LC3B-206ENST00000564844 CFTRP13569 1480 aa28.08■■■□□ 2.09
MAP1LC3B-206ENST00000564844 FGD6Q6ZV73 1430 aa28.07■■■□□ 2.08
MAP1LC3B-206ENST00000564844 PRKRIP1Q9H875 184 aaPredicted RBP28.06■■■□□ 2.08
MAP1LC3B-206ENST00000564844 FGD5Q6ZNL6 1462 aa28.06■■■□□ 2.08
MAP1LC3B-206ENST00000564844 MAP3K1Q13233 1512 aa28.05■■■□□ 2.08
MAP1LC3B-206ENST00000564844 L3MBTL2Q969R5 705 aa28.05■■■□□ 2.08
MAP1LC3B-206ENST00000564844 NOP58Q9Y2X3 529 aaKnown RBP28.04■■■□□ 2.08
MAP1LC3B-206ENST00000564844 UACAQ9BZF9 1416 aa28.02■■■□□ 2.08
MAP1LC3B-206ENST00000564844 RAD54L2Q9Y4B4 1467 aa28.01■■■□□ 2.08
MAP1LC3B-206ENST00000564844 ZNF326Q5BKZ1 582 aaKnown RBP27.98■■■□□ 2.07
MAP1LC3B-206ENST00000564844 HMGXB3Q12766 1538 aa27.97■■■□□ 2.07
MAP1LC3B-206ENST00000564844 NAIPQ13075 1403 aa27.96■■■□□ 2.07
MAP1LC3B-206ENST00000564844 CC2D2AQ9P2K1 1620 aa27.95■■■□□ 2.07
MAP1LC3B-206ENST00000564844 NPM2Q86SE8 214 aaKnown RBP27.95■■■□□ 2.06
MAP1LC3B-206ENST00000564844 CCDC136Q96JN2 1154 aa27.95■■■□□ 2.06
MAP1LC3B-206ENST00000564844 AKNAQ7Z591 1439 aa27.94■■■□□ 2.06
MAP1LC3B-206ENST00000564844 HFM1A2PYH4 1435 aa27.92■■■□□ 2.06
MAP1LC3B-206ENST00000564844 NBPF8Q3BBV2 869 aa27.9■■■□□ 2.06
MAP1LC3B-206ENST00000564844 SALL2Q9Y467 1007 aaPredicted RBP27.9■■■□□ 2.06
MAP1LC3B-206ENST00000564844 MPHOSPH9Q99550 1183 aa27.89■■■□□ 2.06
MAP1LC3B-206ENST00000564844 CASKIN1Q8WXD9 1431 aa27.88■■■□□ 2.05
MAP1LC3B-206ENST00000564844 ZBED9Q6R2W3 1325 aa27.88■■■□□ 2.05
MAP1LC3B-206ENST00000564844 CADPSQ9ULU8 1353 aa27.87■■■□□ 2.05
MAP1LC3B-206ENST00000564844 CFAP43Q8NDM7 1665 aa27.87■■■□□ 2.05
MAP1LC3B-206ENST00000564844 CNTLNQ9NXG0 1405 aa27.87■■■□□ 2.05
MAP1LC3B-206ENST00000564844 RTN4Q9NQC3 1192 aaKnown RBP27.87■■■□□ 2.05
MAP1LC3B-206ENST00000564844 TDRD9Q8NDG6 1382 aaKnown RBP27.86■■■□□ 2.05
MAP1LC3B-206ENST00000564844 PTPN23Q9H3S7 1636 aa27.86■■■□□ 2.05
MAP1LC3B-206ENST00000564844 ERICH6BQ5W0A0 696 aa27.86■■■□□ 2.05
MAP1LC3B-206ENST00000564844 CCDC7Q96M83 1385 aa27.85■■■□□ 2.05
MAP1LC3B-206ENST00000564844 FMN1Q68DA7 1419 aa27.85■■■□□ 2.05
MAP1LC3B-206ENST00000564844 NESP48681 1621 aa27.84■■■□□ 2.05
MAP1LC3B-206ENST00000564844 FYCO1Q9BQS8 1478 aa27.83■■■□□ 2.05
MAP1LC3B-206ENST00000564844 KDM5BQ9UGL1 1544 aa27.83■■■□□ 2.05
MAP1LC3B-206ENST00000564844 ANP32AP39687 249 aaKnown RBP27.82■■■□□ 2.04
MAP1LC3B-206ENST00000564844 KIF7Q2M1P5 1343 aa27.81■■■□□ 2.04
MAP1LC3B-206ENST00000564844 NCOA2Q15596 1464 aa27.8■■■□□ 2.04
MAP1LC3B-206ENST00000564844 RTL5Q5HYW3 569 aaPredicted RBP27.79■■■□□ 2.04
MAP1LC3B-206ENST00000564844 ZBTB47Q9UFB7 747 aaPredicted RBP27.79■■■□□ 2.04
MAP1LC3B-206ENST00000564844 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.78■■■□□ 2.042e-9■■■□□ 16.5
MAP1LC3B-206ENST00000564844 ANO8Q9HCE9 1232 aaPredicted RBP27.77■■■□□ 2.04
MAP1LC3B-206ENST00000564844 MYOM3Q5VTT5 1437 aa27.75■■■□□ 2.03
MAP1LC3B-206ENST00000564844 LAS1LQ9Y4W2 734 aaKnown RBP27.74■■■□□ 2.03
MAP1LC3B-206ENST00000564844 IPO9Q96P70 1041 aaKnown RBP27.72■■■□□ 2.03
MAP1LC3B-206ENST00000564844 MYT1LQ9UL68 1186 aa27.71■■■□□ 2.03
MAP1LC3B-206ENST00000564844 SLC4A1APQ9BWU0 796 aaKnown RBP27.7■■■□□ 2.03
MAP1LC3B-206ENST00000564844 IL27Q8NEV9 243 aa27.69■■■□□ 2.02
MAP1LC3B-206ENST00000564844 DENND4BO75064 1496 aaPredicted RBP27.68■■■□□ 2.02
MAP1LC3B-206ENST00000564844 NUDCQ9Y266 331 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms