RNA–Protein interactions for RNA: ENST00000564512.1

VAC14-205, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-205ENST00000564512 KIAA0586Q9BVV6 1533 aa30.16■■■□□ 2.42
VAC14-205ENST00000564512 SHROOM2Q13796 1616 aa30.14■■■□□ 2.42
VAC14-205ENST00000564512 TNIKQ9UKE5 1360 aa30.05■■■□□ 2.4
VAC14-205ENST00000564512 UGGT2Q9NYU1 1516 aa30.02■■■□□ 2.4
VAC14-205ENST00000564512 OSCARQ8IYS5 282 aa30.01■■■□□ 2.39
VAC14-205ENST00000564512 SAMD9Q5K651 1589 aa29.98■■■□□ 2.39
VAC14-205ENST00000564512 UBTFP17480 764 aaKnown RBP29.96■■■□□ 2.39
VAC14-205ENST00000564512 LOC105371045A0A1W2PR82 267 aa29.94■■■□□ 2.38
VAC14-205ENST00000564512 EHMT2Q96KQ7 1210 aa29.94■■■□□ 2.38
VAC14-205ENST00000564512 EFCAB5A4FU69 1503 aa29.92■■■□□ 2.38
VAC14-205ENST00000564512 KIAA0556O60303 1618 aa29.9■■■□□ 2.38
VAC14-205ENST00000564512 DISP1Q96F81 1524 aa29.86■■■□□ 2.37
VAC14-205ENST00000564512 CEP162Q5TB80 1403 aa29.82■■■□□ 2.36
VAC14-205ENST00000564512 ERCC6L2Q5T890 1561 aa29.81■■■□□ 2.36
VAC14-205ENST00000564512 JPH4Q96JJ6 628 aa29.81■■■□□ 2.36
VAC14-205ENST00000564512 ARHGAP35Q9NRY4 1499 aa29.79■■■□□ 2.36
VAC14-205ENST00000564512 PRG4Q92954 1404 aaPredicted RBP29.79■■■□□ 2.36
VAC14-205ENST00000564512 CLIP1P30622 1438 aa29.76■■■□□ 2.35
VAC14-205ENST00000564512 CARMIL2Q6F5E8 1435 aa29.74■■■□□ 2.35
VAC14-205ENST00000564512 ARHGEF11O15085 1522 aa29.74■■■□□ 2.35
VAC14-205ENST00000564512 RIMBP3CA6NJZ7 1639 aa29.72■■■□□ 2.35
VAC14-205ENST00000564512 RIMBP3BA6NNM3 1639 aa29.72■■■□□ 2.35
VAC14-205ENST00000564512 RIMBP3Q9UFD9 1639 aa29.72■■■□□ 2.35
VAC14-205ENST00000564512 ARAP1Q96P48 1450 aa29.67■■■□□ 2.34
VAC14-205ENST00000564512 FHOD3Q2V2M9 1422 aa29.62■■■□□ 2.33
VAC14-205ENST00000564512 RANGAP1P46060 587 aaPredicted RBP29.57■■■□□ 2.32
VAC14-205ENST00000564512 FMN1Q68DA7 1419 aa29.52■■■□□ 2.32
VAC14-205ENST00000564512 ABCA8O94911 1581 aa29.52■■■□□ 2.32
VAC14-205ENST00000564512 RAPGEF6Q8TEU7 1601 aa29.5■■■□□ 2.31
VAC14-205ENST00000564512 PCF11O94913 1555 aaKnown RBP29.49■■■□□ 2.31
VAC14-205ENST00000564512 PTPRGP23470 1445 aa29.48■■■□□ 2.31
VAC14-205ENST00000564512 P3H3Q8IVL6 736 aa29.47■■■□□ 2.31
VAC14-205ENST00000564512 VPS8Q8N3P4 1428 aa29.45■■■□□ 2.3
VAC14-205ENST00000564512 DNAJC5Q9H3Z4 198 aa29.44■■■□□ 2.3
VAC14-205ENST00000564512 LRRIQ1Q96JM4 1722 aa29.42■■■□□ 2.3
VAC14-205ENST00000564512 HECW1Q76N89 1606 aa29.42■■■□□ 2.3
VAC14-205ENST00000564512 ADCY10Q96PN6 1610 aa29.42■■■□□ 2.3
VAC14-205ENST00000564512 ABCC2Q92887 1545 aa29.41■■■□□ 2.3
VAC14-205ENST00000564512 UHRF1BP1LA0JNW5 1464 aa29.41■■■□□ 2.3
VAC14-205ENST00000564512 FYCO1Q9BQS8 1478 aa29.41■■■□□ 2.3
VAC14-205ENST00000564512 PLB1Q6P1J6 1458 aa29.4■■■□□ 2.3
VAC14-205ENST00000564512 CASKIN1Q8WXD9 1431 aa29.38■■■□□ 2.29
VAC14-205ENST00000564512 UACAQ9BZF9 1416 aa29.37■■■□□ 2.29
VAC14-205ENST00000564512 NUP153P49790 1475 aaKnown RBP29.32■■■□□ 2.28
VAC14-205ENST00000564512 CFAP43Q8NDM7 1665 aa29.31■■■□□ 2.28
VAC14-205ENST00000564512 ZCCHC11Q5TAX3 1644 aaKnown RBP29.27■■■□□ 2.28
VAC14-205ENST00000564512 KDM5BQ9UGL1 1544 aa29.25■■■□□ 2.27
VAC14-205ENST00000564512 CCDC18Q5T9S5 1454 aa29.23■■■□□ 2.27
VAC14-205ENST00000564512 TTBK1Q5TCY1 1321 aaPredicted RBP29.23■■■□□ 2.27
VAC14-205ENST00000564512 EPRSP07814 1512 aaKnown RBP29.22■■■□□ 2.27
VAC14-205ENST00000564512 MAP3K1Q13233 1512 aa29.2■■■□□ 2.26
VAC14-205ENST00000564512 TIAM1Q13009 1591 aa29.18■■■□□ 2.26
VAC14-205ENST00000564512 CDK13Q14004 1512 aaKnown RBP29.17■■■□□ 2.26
VAC14-205ENST00000564512 CYB5RLQ6IPT4 315 aa29.16■■■□□ 2.26
VAC14-205ENST00000564512 ATP10BO94823 1461 aa29.15■■■□□ 2.26
VAC14-205ENST00000564512 MAPKBP1O60336 1514 aa29.1■■■□□ 2.25
VAC14-205ENST00000564512 MAGI3Q5TCQ9 1506 aa29.04■■■□□ 2.24
VAC14-205ENST00000564512 EHBP1L1Q8N3D4 1523 aa29.02■■■□□ 2.24
VAC14-205ENST00000564512 ATP1B4Q9UN42 357 aaPredicted RBP28.97■■■□□ 2.23
VAC14-205ENST00000564512 LRRC9Q6ZRR7 1453 aa28.96■■■□□ 2.23
VAC14-205ENST00000564512 WDR7Q9Y4E6 1490 aa28.96■■■□□ 2.23
VAC14-205ENST00000564512 TROQ12816 1431 aaPredicted RBP28.94■■■□□ 2.22
VAC14-205ENST00000564512 ASXL2Q76L83 1435 aa28.94■■■□□ 2.22
VAC14-205ENST00000564512 ARID3CA6NKF2 412 aa28.92■■■□□ 2.22
VAC14-205ENST00000564512 SUPT6HQ7KZ85 1726 aaKnown RBP28.91■■■□□ 2.22
VAC14-205ENST00000564512 KIF14Q15058 1648 aa28.91■■■□□ 2.22
VAC14-205ENST00000564512 NPM1P06748 294 aaKnown RBP eCLIP28.9■■■□□ 2.22
VAC14-205ENST00000564512 DIP2BQ9P265 1576 aa28.87■■■□□ 2.21
VAC14-205ENST00000564512 KIF13AQ9H1H9 1805 aa28.86■■■□□ 2.21
VAC14-205ENST00000564512 CDK11AQ9UQ88 783 aaPredicted RBP28.86■■■□□ 2.21
VAC14-205ENST00000564512 ABCA9Q8IUA7 1624 aa28.85■■■□□ 2.21
VAC14-205ENST00000564512 APLP2Q06481 763 aa28.85■■■□□ 2.21
VAC14-205ENST00000564512 MTUS2Q5JR59 1369 aa28.85■■■□□ 2.21
VAC14-205ENST00000564512 GLI2P10070 1586 aa28.84■■■□□ 2.21
VAC14-205ENST00000564512 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.83■■■□□ 2.21
VAC14-205ENST00000564512 HNRNPUL2Q1KMD3 747 aaKnown RBP28.83■■■□□ 2.21
VAC14-205ENST00000564512 TTC37Q6PGP7 1564 aa28.81■■■□□ 2.2
VAC14-205ENST00000564512 PLEKHD1A6NEE1 506 aa28.8■■■□□ 2.2
VAC14-205ENST00000564512 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.79■■■□□ 2.2
VAC14-205ENST00000564512 KANK4Q5T7N3 995 aaPredicted RBP28.79■■■□□ 2.2
VAC14-205ENST00000564512 ABCC10Q5T3U5 1492 aa28.78■■■□□ 2.2
VAC14-205ENST00000564512 CDC42BPAQ5VT25 1732 aa28.78■■■□□ 2.2
VAC14-205ENST00000564512 MYO5CQ9NQX4 1742 aa28.78■■■□□ 2.2
VAC14-205ENST00000564512 ITSN2Q9NZM3 1697 aa28.77■■■□□ 2.2
VAC14-205ENST00000564512 MAP3K4Q9Y6R4 1608 aa28.77■■■□□ 2.2
VAC14-205ENST00000564512 NCOA2Q15596 1464 aa28.75■■■□□ 2.19
VAC14-205ENST00000564512 PREX2Q70Z35 1606 aa28.74■■■□□ 2.19
VAC14-205ENST00000564512 CDC42BPBQ9Y5S2 1711 aa28.69■■■□□ 2.18
VAC14-205ENST00000564512 ARAP3Q8WWN8 1544 aa28.68■■■□□ 2.18
VAC14-205ENST00000564512 PPRC1Q5VV67 1664 aaKnown RBP28.65■■■□□ 2.18
VAC14-205ENST00000564512 GPATCH8Q9UKJ3 1502 aaKnown RBP28.6■■■□□ 2.17
VAC14-205ENST00000564512 CFAP74Q9C0B2 1584 aa28.58■■■□□ 2.17
VAC14-205ENST00000564512 KCNH8Q96L42 1107 aa28.58■■■□□ 2.17
VAC14-205ENST00000564512 PHLDB1Q86UU1 1377 aa28.58■■■□□ 2.17
VAC14-205ENST00000564512 MYOM3Q5VTT5 1437 aa28.58■■■□□ 2.17
VAC14-205ENST00000564512 TSPOAP1O95153 1857 aa28.55■■■□□ 2.16
VAC14-205ENST00000564512 CCNB3Q8WWL7 1395 aa28.55■■■□□ 2.16
VAC14-205ENST00000564512 PLCH2O75038 1416 aa28.54■■■□□ 2.16
VAC14-205ENST00000564512 CD109Q6YHK3 1445 aa28.52■■■□□ 2.16
VAC14-205ENST00000564512 MIA2Q96PC5 1412 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms