RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 RUSC2Q8N2Y8 1516 aa26.01■■□□□ 1.75
SPG7-210ENST00000564409 PRG4Q92954 1404 aaPredicted RBP26.01■■□□□ 1.75
SPG7-210ENST00000564409 KIAA0586Q9BVV6 1533 aa25.94■■□□□ 1.74
SPG7-210ENST00000564409 CARMIL1Q5VZK9 1371 aa25.89■■□□□ 1.74
SPG7-210ENST00000564409 NPM1P06748 294 aaKnown RBP eCLIP25.75■■□□□ 1.71
SPG7-210ENST00000564409 CARMIL2Q6F5E8 1435 aa25.71■■□□□ 1.71
SPG7-210ENST00000564409 IQGAP2Q13576 1575 aa25.7■■□□□ 1.71
SPG7-210ENST00000564409 KIF13AQ9H1H9 1805 aa25.69■■□□□ 1.7
SPG7-210ENST00000564409 MAPKBP1O60336 1514 aa25.68■■□□□ 1.7
SPG7-210ENST00000564409 RAPGEF2Q9Y4G8 1499 aa25.68■■□□□ 1.7
SPG7-210ENST00000564409 ADCY10Q96PN6 1610 aa25.68■■□□□ 1.7
SPG7-210ENST00000564409 PTPRGP23470 1445 aa25.65■■□□□ 1.7
SPG7-210ENST00000564409 TNIKQ9UKE5 1360 aa25.63■■□□□ 1.69
SPG7-210ENST00000564409 ABCC10Q5T3U5 1492 aa25.61■■□□□ 1.69
SPG7-210ENST00000564409 UGGT2Q9NYU1 1516 aa25.56■■□□□ 1.68
SPG7-210ENST00000564409 FAM69CQ0P6D2 419 aa25.55■■□□□ 1.68
SPG7-210ENST00000564409 DIP2BQ9P265 1576 aa25.53■■□□□ 1.68
SPG7-210ENST00000564409 DISP1Q96F81 1524 aa25.53■■□□□ 1.68
SPG7-210ENST00000564409 UHRF1BP1LA0JNW5 1464 aa25.51■■□□□ 1.67
SPG7-210ENST00000564409 ABCC2Q92887 1545 aa25.51■■□□□ 1.67
SPG7-210ENST00000564409 CTTNBP2Q8WZ74 1663 aa25.48■■□□□ 1.67
SPG7-210ENST00000564409 UACAQ9BZF9 1416 aa25.46■■□□□ 1.67
SPG7-210ENST00000564409 PRXQ9BXM0 1461 aa25.46■■□□□ 1.67
SPG7-210ENST00000564409 KIAA0556O60303 1618 aa25.45■■□□□ 1.66
SPG7-210ENST00000564409 TTBK1Q5TCY1 1321 aaPredicted RBP25.44■■□□□ 1.66
SPG7-210ENST00000564409 GOLGA3Q08378 1498 aa25.41■■□□□ 1.66
SPG7-210ENST00000564409 PLB1Q6P1J6 1458 aa25.41■■□□□ 1.66
SPG7-210ENST00000564409 KDM5BQ9UGL1 1544 aa25.37■■□□□ 1.65
SPG7-210ENST00000564409 ASXL2Q76L83 1435 aa25.37■■□□□ 1.65
SPG7-210ENST00000564409 GLI2P10070 1586 aa25.34■■□□□ 1.65
SPG7-210ENST00000564409 TSPOAP1O95153 1857 aa25.34■■□□□ 1.65
SPG7-210ENST00000564409 AEBP2Q6ZN18 517 aaPredicted RBP25.32■■□□□ 1.64
SPG7-210ENST00000564409 EEA1Q15075 1411 aa25.3■■□□□ 1.64
SPG7-210ENST00000564409 CSRNP3Q8WYN3 585 aa25.3■■□□□ 1.64
SPG7-210ENST00000564409 KDM6BO15054 1643 aa25.28■■□□□ 1.64
SPG7-210ENST00000564409 ZCCHC11Q5TAX3 1644 aaKnown RBP25.28■■□□□ 1.64
SPG7-210ENST00000564409 FAM9AQ8IZU1 332 aaPredicted RBP25.26■■□□□ 1.63
SPG7-210ENST00000564409 EPRSP07814 1512 aaKnown RBP25.22■■□□□ 1.63
SPG7-210ENST00000564409 ABCA8O94911 1581 aa25.21■■□□□ 1.63
SPG7-210ENST00000564409 PPRC1Q5VV67 1664 aaKnown RBP25.19■■□□□ 1.62
SPG7-210ENST00000564409 MAP3K4Q9Y6R4 1608 aa25.18■■□□□ 1.62
SPG7-210ENST00000564409 WDR7Q9Y4E6 1490 aa25.17■■□□□ 1.62
SPG7-210ENST00000564409 TEX14Q8IWB6 1497 aa25.15■■□□□ 1.62
SPG7-210ENST00000564409 SAMD9Q5K651 1589 aa25.11■■□□□ 1.61
SPG7-210ENST00000564409 CFAP43Q8NDM7 1665 aa25.05■■□□□ 1.6
SPG7-210ENST00000564409 KIF21BO75037 1637 aa25.04■■□□□ 1.6
SPG7-210ENST00000564409 P3H3Q8IVL6 736 aa25.03■■□□□ 1.6
SPG7-210ENST00000564409 MAGI3Q5TCQ9 1506 aa25.01■■□□□ 1.59
SPG7-210ENST00000564409 ATP10BO94823 1461 aa24.99■■□□□ 1.59
SPG7-210ENST00000564409 CD109Q6YHK3 1445 aa24.99■■□□□ 1.59
SPG7-210ENST00000564409 RAPGEF6Q8TEU7 1601 aa24.98■■□□□ 1.59
SPG7-210ENST00000564409 KCNH8Q96L42 1107 aa24.98■■□□□ 1.59
SPG7-210ENST00000564409 COL17A1Q9UMD9 1497 aaPredicted RBP24.96■■□□□ 1.59
SPG7-210ENST00000564409 EFCAB5A4FU69 1503 aa24.93■■□□□ 1.58
SPG7-210ENST00000564409 CHIC1Q5VXU3 224 aa24.92■■□□□ 1.58
SPG7-210ENST00000564409 KDM4FA0A1W2PPD8 638 aa24.9■■□□□ 1.58
SPG7-210ENST00000564409 FHOD3Q2V2M9 1422 aa24.86■■□□□ 1.57
SPG7-210ENST00000564409 ABCA9Q8IUA7 1624 aa24.86■■□□□ 1.57
SPG7-210ENST00000564409 NUP153P49790 1475 aaKnown RBP24.86■■□□□ 1.57
SPG7-210ENST00000564409 ARID3CA6NKF2 412 aa24.86■■□□□ 1.57
SPG7-210ENST00000564409 PHLDB1Q86UU1 1377 aa24.85■■□□□ 1.57
SPG7-210ENST00000564409 RANGAP1P46060 587 aaPredicted RBP24.85■■□□□ 1.57
SPG7-210ENST00000564409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.82■■□□□ 1.56
SPG7-210ENST00000564409 HNRNPUL2Q1KMD3 747 aaKnown RBP24.82■■□□□ 1.56
SPG7-210ENST00000564409 ARAP3Q8WWN8 1544 aa24.81■■□□□ 1.56
SPG7-210ENST00000564409 UBTFP17480 764 aaKnown RBP24.8■■□□□ 1.56
SPG7-210ENST00000564409 PLEKHD1A6NEE1 506 aa24.77■■□□□ 1.56
SPG7-210ENST00000564409 ADGRL1O94910 1474 aa24.77■■□□□ 1.56
SPG7-210ENST00000564409 NEO1Q92859 1461 aa24.75■■□□□ 1.55
SPG7-210ENST00000564409 FMN1Q68DA7 1419 aa24.72■■□□□ 1.55
SPG7-210ENST00000564409 ARHGAP35Q9NRY4 1499 aa24.65■■□□□ 1.54
SPG7-210ENST00000564409 HECW1Q76N89 1606 aa24.63■■□□□ 1.53
SPG7-210ENST00000564409 CFAP74Q9C0B2 1584 aa24.63■■□□□ 1.53
SPG7-210ENST00000564409 EHMT2Q96KQ7 1210 aa24.62■■□□□ 1.53
SPG7-210ENST00000564409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.61■■□□□ 1.53
SPG7-210ENST00000564409 CDK11AQ9UQ88 783 aaPredicted RBP24.59■■□□□ 1.53
SPG7-210ENST00000564409 CDK13Q14004 1512 aaKnown RBP24.59■■□□□ 1.53
SPG7-210ENST00000564409 RAPGEF3O95398 923 aa24.57■■□□□ 1.52
SPG7-210ENST00000564409 FANCAO15360 1455 aa24.57■■□□□ 1.52
SPG7-210ENST00000564409 AKNAQ7Z591 1439 aa24.55■■□□□ 1.52
SPG7-210ENST00000564409 TTC37Q6PGP7 1564 aa24.54■■□□□ 1.52
SPG7-210ENST00000564409 FRMPD1Q5SYB0 1578 aa24.54■■□□□ 1.52
SPG7-210ENST00000564409 DENND4BO75064 1496 aaPredicted RBP24.53■■□□□ 1.52
SPG7-210ENST00000564409 ATP1B4Q9UN42 357 aaPredicted RBP24.53■■□□□ 1.52
SPG7-210ENST00000564409 RICTORQ6R327 1708 aa24.51■■□□□ 1.51
SPG7-210ENST00000564409 PLCH2O75038 1416 aa24.49■■□□□ 1.51
SPG7-210ENST00000564409 MYO5CQ9NQX4 1742 aa24.46■■□□□ 1.51
SPG7-210ENST00000564409 CLIP1P30622 1438 aa24.45■■□□□ 1.51
SPG7-210ENST00000564409 TROQ12816 1431 aaPredicted RBP24.45■■□□□ 1.51
SPG7-210ENST00000564409 ZMYM4Q5VZL5 1548 aa24.45■■□□□ 1.5
SPG7-210ENST00000564409 KIF14Q15058 1648 aa24.44■■□□□ 1.5
SPG7-210ENST00000564409 ARHGEF40Q8TER5 1519 aa24.44■■□□□ 1.5
SPG7-210ENST00000564409 CASKIN1Q8WXD9 1431 aa24.44■■□□□ 1.5
SPG7-210ENST00000564409 CCDC18Q5T9S5 1454 aa24.43■■□□□ 1.5
SPG7-210ENST00000564409 MAGI2Q86UL8 1455 aa24.43■■□□□ 1.5
SPG7-210ENST00000564409 ADAMTSL3P82987 1691 aa24.43■■□□□ 1.5
SPG7-210ENST00000564409 EFCAB2Q5VUJ9 269 aa24.42■■□□□ 1.5
SPG7-210ENST00000564409 LRRIQ1Q96JM4 1722 aa24.41■■□□□ 1.5
SPG7-210ENST00000564409 HECW2Q9P2P5 1572 aa24.4■■□□□ 1.5
SPG7-210ENST00000564409 BCORL1Q5H9F3 1711 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 252.3 ms