RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 ADAMTS12P58397 1594 aa14.33□□□□□ -0.12
NSMCE1-207ENST00000564342 CLASP1Q7Z460 1538 aa14.32□□□□□ -0.12
NSMCE1-207ENST00000564342 POTEHQ6S545 545 aa14.31□□□□□ -0.12
NSMCE1-207ENST00000564342 CHMP7Q8WUX9 453 aaPredicted RBP14.31□□□□□ -0.12
NSMCE1-207ENST00000564342 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
NSMCE1-207ENST00000564342 GRIN2AQ12879 1464 aa14.27□□□□□ -0.12
NSMCE1-207ENST00000564342 TRIM41Q8WV44 630 aa14.26□□□□□ -0.13
NSMCE1-207ENST00000564342 FHAD1B1AJZ9 1412 aa14.25□□□□□ -0.13
NSMCE1-207ENST00000564342 CEP170Q5SW79 1584 aa14.22□□□□□ -0.13
NSMCE1-207ENST00000564342 NUP160Q12769 1436 aa14.21□□□□□ -0.13
NSMCE1-207ENST00000564342 ARAP1Q96P48 1450 aa14.2□□□□□ -0.14
NSMCE1-207ENST00000564342 KIF27Q86VH2 1401 aa14.2□□□□□ -0.14
NSMCE1-207ENST00000564342 CUL7Q14999 1698 aa14.18□□□□□ -0.14
NSMCE1-207ENST00000564342 IGF1RP08069 1367 aa14.16□□□□□ -0.14
NSMCE1-207ENST00000564342 SHROOM2Q13796 1616 aa14.15□□□□□ -0.14
NSMCE1-207ENST00000564342 HOXD11P31277 338 aaPredicted RBP14.14□□□□□ -0.15
NSMCE1-207ENST00000564342 CYB5RLQ6IPT4 315 aa14.14□□□□□ -0.15
NSMCE1-207ENST00000564342 RUSC2Q8N2Y8 1516 aa14.13□□□□□ -0.15
NSMCE1-207ENST00000564342 ERCC6L2Q5T890 1561 aa14.12□□□□□ -0.15
NSMCE1-207ENST00000564342 CARMIL1Q5VZK9 1371 aa14.07□□□□□ -0.16
NSMCE1-207ENST00000564342 KIAA0586Q9BVV6 1533 aa14.04□□□□□ -0.16
NSMCE1-207ENST00000564342 PRG4Q92954 1404 aaPredicted RBP14.02□□□□□ -0.16
NSMCE1-207ENST00000564342 JPH4Q96JJ6 628 aa14.01□□□□□ -0.17
NSMCE1-207ENST00000564342 RAPGEF2Q9Y4G8 1499 aa13.99□□□□□ -0.17
NSMCE1-207ENST00000564342 IQGAP2Q13576 1575 aa13.96□□□□□ -0.17
NSMCE1-207ENST00000564342 CTTNBP2Q8WZ74 1663 aa13.94□□□□□ -0.18
NSMCE1-207ENST00000564342 PRXQ9BXM0 1461 aa13.93□□□□□ -0.18
NSMCE1-207ENST00000564342 UGGT2Q9NYU1 1516 aa13.89□□□□□ -0.19
NSMCE1-207ENST00000564342 ADCY10Q96PN6 1610 aa13.87□□□□□ -0.19
NSMCE1-207ENST00000564342 DISP1Q96F81 1524 aa13.87□□□□□ -0.19
NSMCE1-207ENST00000564342 TRHP20396 242 aaPredicted RBP13.87□□□□□ -0.19
NSMCE1-207ENST00000564342 EEA1Q15075 1411 aa13.87□□□□□ -0.19
NSMCE1-207ENST00000564342 CARMIL2Q6F5E8 1435 aa13.87□□□□□ -0.19
NSMCE1-207ENST00000564342 KIAA0556O60303 1618 aa13.85□□□□□ -0.19
NSMCE1-207ENST00000564342 CSRNP3Q8WYN3 585 aa13.84□□□□□ -0.19
NSMCE1-207ENST00000564342 TNIKQ9UKE5 1360 aa13.83□□□□□ -0.19
NSMCE1-207ENST00000564342 PTPRGP23470 1445 aa13.82□□□□□ -0.2
NSMCE1-207ENST00000564342 KIF13AQ9H1H9 1805 aa13.8□□□□□ -0.2
NSMCE1-207ENST00000564342 RNF216Q9NWF9 866 aaPredicted RBP13.8□□□□□ -0.2
NSMCE1-207ENST00000564342 MAPKBP1O60336 1514 aa13.8□□□□□ -0.2
NSMCE1-207ENST00000564342 KIF21BO75037 1637 aa13.78□□□□□ -0.2
NSMCE1-207ENST00000564342 GOLGA3Q08378 1498 aa13.77□□□□□ -0.21
NSMCE1-207ENST00000564342 UHRF1BP1LA0JNW5 1464 aa13.76□□□□□ -0.21
NSMCE1-207ENST00000564342 TTBK1Q5TCY1 1321 aaPredicted RBP13.76□□□□□ -0.21
NSMCE1-207ENST00000564342 FAM9AQ8IZU1 332 aaPredicted RBP13.76□□□□□ -0.21
NSMCE1-207ENST00000564342 ABCC2Q92887 1545 aa13.75□□□□□ -0.21
NSMCE1-207ENST00000564342 NPM1P06748 294 aaKnown RBP eCLIP13.75□□□□□ -0.21
NSMCE1-207ENST00000564342 UACAQ9BZF9 1416 aa13.74□□□□□ -0.21
NSMCE1-207ENST00000564342 DIP2BQ9P265 1576 aa13.74□□□□□ -0.21
NSMCE1-207ENST00000564342 SAMD9Q5K651 1589 aa13.73□□□□□ -0.21
NSMCE1-207ENST00000564342 ABCC10Q5T3U5 1492 aa13.73□□□□□ -0.21
NSMCE1-207ENST00000564342 KDM5BQ9UGL1 1544 aa13.7□□□□□ -0.22
NSMCE1-207ENST00000564342 ZCCHC11Q5TAX3 1644 aaKnown RBP13.7□□□□□ -0.22
NSMCE1-207ENST00000564342 ABCA8O94911 1581 aa13.7□□□□□ -0.22
NSMCE1-207ENST00000564342 PLB1Q6P1J6 1458 aa13.69□□□□□ -0.22
NSMCE1-207ENST00000564342 PPP4R3CPQ6ZMV5 832 aa13.68□□□□□ -0.22
NSMCE1-207ENST00000564342 CNKSR2Q8WXI2 1034 aa13.68□□□□□ -0.22
NSMCE1-207ENST00000564342 ASXL2Q76L83 1435 aa13.65□□□□□ -0.22
NSMCE1-207ENST00000564342 FAM69CQ0P6D2 419 aa13.65□□□□□ -0.22
NSMCE1-207ENST00000564342 P3H3Q8IVL6 736 aa13.64□□□□□ -0.23
NSMCE1-207ENST00000564342 GLI2P10070 1586 aa13.63□□□□□ -0.23
NSMCE1-207ENST00000564342 EFCAB5A4FU69 1503 aa13.63□□□□□ -0.23
NSMCE1-207ENST00000564342 TSPOAP1O95153 1857 aa13.63□□□□□ -0.23
NSMCE1-207ENST00000564342 RAPGEF6Q8TEU7 1601 aa13.61□□□□□ -0.23
NSMCE1-207ENST00000564342 PPRC1Q5VV67 1664 aaKnown RBP13.59□□□□□ -0.23
NSMCE1-207ENST00000564342 EPRSP07814 1512 aaKnown RBP13.59□□□□□ -0.23
NSMCE1-207ENST00000564342 FHOD3Q2V2M9 1422 aa13.59□□□□□ -0.23
NSMCE1-207ENST00000564342 RANGAP1P46060 587 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-207ENST00000564342 MAP3K4Q9Y6R4 1608 aa13.58□□□□□ -0.24
NSMCE1-207ENST00000564342 EHMT2Q96KQ7 1210 aa13.58□□□□□ -0.24
NSMCE1-207ENST00000564342 WDR7Q9Y4E6 1490 aa13.58□□□□□ -0.24
NSMCE1-207ENST00000564342 UBTFP17480 764 aaKnown RBP13.57□□□□□ -0.24
NSMCE1-207ENST00000564342 ATP10BO94823 1461 aa13.55□□□□□ -0.24
NSMCE1-207ENST00000564342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.54□□□□□ -0.24
NSMCE1-207ENST00000564342 NUP153P49790 1475 aaKnown RBP13.54□□□□□ -0.24
NSMCE1-207ENST00000564342 ARHGAP35Q9NRY4 1499 aa13.54□□□□□ -0.24
NSMCE1-207ENST00000564342 KDM6BO15054 1643 aa13.53□□□□□ -0.24
NSMCE1-207ENST00000564342 CFAP43Q8NDM7 1665 aa13.53□□□□□ -0.24
NSMCE1-207ENST00000564342 ARID3CA6NKF2 412 aa13.51□□□□□ -0.25
NSMCE1-207ENST00000564342 TEX14Q8IWB6 1497 aa13.48□□□□□ -0.25
NSMCE1-207ENST00000564342 ABCA9Q8IUA7 1624 aa13.47□□□□□ -0.25
NSMCE1-207ENST00000564342 FMN1Q68DA7 1419 aa13.47□□□□□ -0.25
NSMCE1-207ENST00000564342 MAGI3Q5TCQ9 1506 aa13.46□□□□□ -0.25
NSMCE1-207ENST00000564342 KCNH8Q96L42 1107 aa13.46□□□□□ -0.25
NSMCE1-207ENST00000564342 HECW1Q76N89 1606 aa13.46□□□□□ -0.26
NSMCE1-207ENST00000564342 CD109Q6YHK3 1445 aa13.45□□□□□ -0.26
NSMCE1-207ENST00000564342 LRRIQ1Q96JM4 1722 aa13.44□□□□□ -0.26
NSMCE1-207ENST00000564342 CDK13Q14004 1512 aaKnown RBP13.44□□□□□ -0.26
NSMCE1-207ENST00000564342 COL17A1Q9UMD9 1497 aaPredicted RBP13.43□□□□□ -0.26
NSMCE1-207ENST00000564342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.43□□□□□ -0.26
NSMCE1-207ENST00000564342 HNRNPUL2Q1KMD3 747 aaKnown RBP13.43□□□□□ -0.26
NSMCE1-207ENST00000564342 PCF11O94913 1555 aaKnown RBP13.4□□□□□ -0.26
NSMCE1-207ENST00000564342 CLIP1P30622 1438 aa13.39□□□□□ -0.27
NSMCE1-207ENST00000564342 PLEKHD1A6NEE1 506 aa13.38□□□□□ -0.27
NSMCE1-207ENST00000564342 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.38□□□□□ -0.27
NSMCE1-207ENST00000564342 TTC37Q6PGP7 1564 aa13.37□□□□□ -0.27
NSMCE1-207ENST00000564342 DSG3P32926 999 aa13.36□□□□□ -0.27
NSMCE1-207ENST00000564342 CASKIN1Q8WXD9 1431 aa13.36□□□□□ -0.27
NSMCE1-207ENST00000564342 ATP1B4Q9UN42 357 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-207ENST00000564342 ARAP3Q8WWN8 1544 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms