RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 CARMIL1Q5VZK9 1371 aa34.29■■■■□ 3.08
SHCBP1-203ENST00000564272 JPH4Q96JJ6 628 aa34.27■■■■□ 3.08
SHCBP1-203ENST00000564272 KIAA0586Q9BVV6 1533 aa34.22■■■■□ 3.07
SHCBP1-203ENST00000564272 TRHP20396 242 aaPredicted RBP34.22■■■■□ 3.07
SHCBP1-203ENST00000564272 RAPGEF2Q9Y4G8 1499 aa34.04■■■■□ 3.04
SHCBP1-203ENST00000564272 IQGAP2Q13576 1575 aa34.01■■■■□ 3.03
SHCBP1-203ENST00000564272 ADCY10Q96PN6 1610 aa33.88■■■■□ 3.01
SHCBP1-203ENST00000564272 CARMIL2Q6F5E8 1435 aa33.85■■■■□ 3.01
SHCBP1-203ENST00000564272 PRXQ9BXM0 1461 aa33.82■■■■□ 3.01
SHCBP1-203ENST00000564272 PTPRGP23470 1445 aa33.8■■■■□ 3
SHCBP1-203ENST00000564272 DISP1Q96F81 1524 aa33.8■■■■□ 3
SHCBP1-203ENST00000564272 TNIKQ9UKE5 1360 aa33.79■■■■□ 3
SHCBP1-203ENST00000564272 UGGT2Q9NYU1 1516 aa33.79■■■■□ 3
SHCBP1-203ENST00000564272 TTBK1Q5TCY1 1321 aaPredicted RBP33.79■■■■□ 3
SHCBP1-203ENST00000564272 CTTNBP2Q8WZ74 1663 aa33.78■■■■□ 3
SHCBP1-203ENST00000564272 MAPKBP1O60336 1514 aa33.71■■■□□ 2.99
SHCBP1-203ENST00000564272 NPM1P06748 294 aaKnown RBP eCLIP33.71■■■□□ 2.99
SHCBP1-203ENST00000564272 KIF13AQ9H1H9 1805 aa33.71■■■□□ 2.99
SHCBP1-203ENST00000564272 KIAA0556O60303 1618 aa33.71■■■□□ 2.99
SHCBP1-203ENST00000564272 CSRNP3Q8WYN3 585 aa33.63■■■□□ 2.97
SHCBP1-203ENST00000564272 ABCC10Q5T3U5 1492 aa33.61■■■□□ 2.97
SHCBP1-203ENST00000564272 EEA1Q15075 1411 aa33.6■■■□□ 2.97
SHCBP1-203ENST00000564272 ABCC2Q92887 1545 aa33.58■■■□□ 2.97
SHCBP1-203ENST00000564272 UACAQ9BZF9 1416 aa33.58■■■□□ 2.97
SHCBP1-203ENST00000564272 DIP2BQ9P265 1576 aa33.58■■■□□ 2.97
SHCBP1-203ENST00000564272 UHRF1BP1LA0JNW5 1464 aa33.56■■■□□ 2.96
SHCBP1-203ENST00000564272 FAM69CQ0P6D2 419 aa33.54■■■□□ 2.96
SHCBP1-203ENST00000564272 GOLGA3Q08378 1498 aa33.53■■■□□ 2.96
SHCBP1-203ENST00000564272 FAM9AQ8IZU1 332 aaPredicted RBP33.5■■■□□ 2.95
SHCBP1-203ENST00000564272 CHIC1Q5VXU3 224 aa33.48■■■□□ 2.95
SHCBP1-203ENST00000564272 ASXL2Q76L83 1435 aa33.43■■■□□ 2.94
SHCBP1-203ENST00000564272 KDM5BQ9UGL1 1544 aa33.42■■■□□ 2.94
SHCBP1-203ENST00000564272 PLB1Q6P1J6 1458 aa33.41■■■□□ 2.94
SHCBP1-203ENST00000564272 ZCCHC11Q5TAX3 1644 aaKnown RBP33.39■■■□□ 2.94
SHCBP1-203ENST00000564272 KIF21BO75037 1637 aa33.35■■■□□ 2.93
SHCBP1-203ENST00000564272 ABCA8O94911 1581 aa33.34■■■□□ 2.93
SHCBP1-203ENST00000564272 SAMD9Q5K651 1589 aa33.33■■■□□ 2.93
SHCBP1-203ENST00000564272 TSPOAP1O95153 1857 aa33.33■■■□□ 2.93
SHCBP1-203ENST00000564272 P3H3Q8IVL6 736 aa33.31■■■□□ 2.92
SHCBP1-203ENST00000564272 GLI2P10070 1586 aa33.26■■■□□ 2.92
SHCBP1-203ENST00000564272 EPRSP07814 1512 aaKnown RBP33.23■■■□□ 2.91
SHCBP1-203ENST00000564272 RANGAP1P46060 587 aaPredicted RBP33.22■■■□□ 2.91
SHCBP1-203ENST00000564272 WDR7Q9Y4E6 1490 aa33.18■■■□□ 2.9
SHCBP1-203ENST00000564272 PPRC1Q5VV67 1664 aaKnown RBP33.17■■■□□ 2.9
SHCBP1-203ENST00000564272 EHMT2Q96KQ7 1210 aa33.15■■■□□ 2.9
SHCBP1-203ENST00000564272 KDM6BO15054 1643 aa33.14■■■□□ 2.9
SHCBP1-203ENST00000564272 MAP3K4Q9Y6R4 1608 aa33.13■■■□□ 2.89
SHCBP1-203ENST00000564272 FHOD3Q2V2M9 1422 aa33.12■■■□□ 2.89
SHCBP1-203ENST00000564272 ARID3CA6NKF2 412 aa33.1■■■□□ 2.89
SHCBP1-203ENST00000564272 RAPGEF6Q8TEU7 1601 aa33.09■■■□□ 2.89
SHCBP1-203ENST00000564272 EFCAB5A4FU69 1503 aa33.07■■■□□ 2.88
SHCBP1-203ENST00000564272 ATP10BO94823 1461 aa33.05■■■□□ 2.88
SHCBP1-203ENST00000564272 UBTFP17480 764 aaKnown RBP33.03■■■□□ 2.88
SHCBP1-203ENST00000564272 KCNH8Q96L42 1107 aa32.99■■■□□ 2.87
SHCBP1-203ENST00000564272 NUP153P49790 1475 aaKnown RBP32.97■■■□□ 2.87
SHCBP1-203ENST00000564272 TEX14Q8IWB6 1497 aa32.96■■■□□ 2.87
SHCBP1-203ENST00000564272 CFAP43Q8NDM7 1665 aa32.94■■■□□ 2.86
SHCBP1-203ENST00000564272 CD109Q6YHK3 1445 aa32.9■■■□□ 2.86
SHCBP1-203ENST00000564272 COL17A1Q9UMD9 1497 aaPredicted RBP32.88■■■□□ 2.85
SHCBP1-203ENST00000564272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.86■■■□□ 2.85
SHCBP1-203ENST00000564272 HNRNPUL2Q1KMD3 747 aaKnown RBP32.86■■■□□ 2.85
SHCBP1-203ENST00000564272 MAGI3Q5TCQ9 1506 aa32.86■■■□□ 2.85
SHCBP1-203ENST00000564272 ARHGAP35Q9NRY4 1499 aa32.86■■■□□ 2.85
SHCBP1-203ENST00000564272 AEBP2Q6ZN18 517 aaPredicted RBP32.8■■■□□ 2.84
SHCBP1-203ENST00000564272 ABCA9Q8IUA7 1624 aa32.8■■■□□ 2.84
SHCBP1-203ENST00000564272 FMN1Q68DA7 1419 aa32.73■■■□□ 2.83
SHCBP1-203ENST00000564272 CDK13Q14004 1512 aaKnown RBP32.72■■■□□ 2.83
SHCBP1-203ENST00000564272 HECW1Q76N89 1606 aa32.69■■■□□ 2.82
SHCBP1-203ENST00000564272 PLEKHD1A6NEE1 506 aa32.66■■■□□ 2.82
SHCBP1-203ENST00000564272 ATP1B4Q9UN42 357 aaPredicted RBP32.62■■■□□ 2.81
SHCBP1-203ENST00000564272 ARAP3Q8WWN8 1544 aa32.58■■■□□ 2.81
SHCBP1-203ENST00000564272 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.57■■■□□ 2.8
SHCBP1-203ENST00000564272 TTC37Q6PGP7 1564 aa32.57■■■□□ 2.8
SHCBP1-203ENST00000564272 KDM4FA0A1W2PPD8 638 aa32.56■■■□□ 2.8
SHCBP1-203ENST00000564272 NEO1Q92859 1461 aa32.54■■■□□ 2.8
SHCBP1-203ENST00000564272 LRRIQ1Q96JM4 1722 aa32.53■■■□□ 2.8
SHCBP1-203ENST00000564272 PCF11O94913 1555 aaKnown RBP32.53■■■□□ 2.8
SHCBP1-203ENST00000564272 PHLDB1Q86UU1 1377 aa32.52■■■□□ 2.8
SHCBP1-203ENST00000564272 CLIP1P30622 1438 aa32.5■■■□□ 2.79
SHCBP1-203ENST00000564272 ADGRL1O94910 1474 aa32.47■■■□□ 2.79
SHCBP1-203ENST00000564272 CASKIN1Q8WXD9 1431 aa32.45■■■□□ 2.79
SHCBP1-203ENST00000564272 FRMPD1Q5SYB0 1578 aa32.43■■■□□ 2.78
SHCBP1-203ENST00000564272 FANCAO15360 1455 aa32.42■■■□□ 2.78
SHCBP1-203ENST00000564272 CFAP74Q9C0B2 1584 aa32.41■■■□□ 2.78
SHCBP1-203ENST00000564272 KIF14Q15058 1648 aa32.41■■■□□ 2.78
SHCBP1-203ENST00000564272 RAPGEF3O95398 923 aa32.41■■■□□ 2.78
SHCBP1-203ENST00000564272 CDK11AQ9UQ88 783 aaPredicted RBP32.41■■■□□ 2.78
SHCBP1-203ENST00000564272 TROQ12816 1431 aaPredicted RBP32.4■■■□□ 2.78
SHCBP1-203ENST00000564272 AKNAQ7Z591 1439 aa32.38■■■□□ 2.77
SHCBP1-203ENST00000564272 CCDC18Q5T9S5 1454 aa32.36■■■□□ 2.77
SHCBP1-203ENST00000564272 FYCO1Q9BQS8 1478 aa32.36■■■□□ 2.77
SHCBP1-203ENST00000564272 PLCH2O75038 1416 aa32.34■■■□□ 2.77
SHCBP1-203ENST00000564272 MYO5CQ9NQX4 1742 aa32.33■■■□□ 2.77
SHCBP1-203ENST00000564272 DENND4BO75064 1496 aaPredicted RBP32.32■■■□□ 2.76
SHCBP1-203ENST00000564272 RICTORQ6R327 1708 aa32.31■■■□□ 2.76
SHCBP1-203ENST00000564272 CEP162Q5TB80 1403 aa32.26■■■□□ 2.76
SHCBP1-203ENST00000564272 ARHGEF40Q8TER5 1519 aa32.22■■■□□ 2.75
SHCBP1-203ENST00000564272 ARHGAP5Q13017 1502 aa32.2■■■□□ 2.74
SHCBP1-203ENST00000564272 ZMYM4Q5VZL5 1548 aa32.2■■■□□ 2.74
SHCBP1-203ENST00000564272 SCAPERQ9BY12 1400 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms