RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 IGF1RP08069 1367 aa41.77■■■■■ 4.28
NME3-206ENST00000564252 CUL7Q14999 1698 aa41.71■■■■■ 4.27
NME3-206ENST00000564252 KIAA0586Q9BVV6 1533 aa41.6■■■■■ 4.25
NME3-206ENST00000564252 CARMIL1Q5VZK9 1371 aa41.48■■■■■ 4.23
NME3-206ENST00000564252 KIF13AQ9H1H9 1805 aa41.4■■■■■ 4.22
NME3-206ENST00000564252 ADCY10Q96PN6 1610 aa41.36■■■■■ 4.21
NME3-206ENST00000564252 MAPKBP1O60336 1514 aa41.28■■■■■ 4.2
NME3-206ENST00000564252 NPM1P06748 294 aaKnown RBP eCLIP41.27■■■■■ 4.2
NME3-206ENST00000564252 ABCC10Q5T3U5 1492 aa41.23■■■■■ 4.19
NME3-206ENST00000564252 IQGAP2Q13576 1575 aa41.22■■■■■ 4.19
NME3-206ENST00000564252 PTPRGP23470 1445 aa41.17■■■■■ 4.18
NME3-206ENST00000564252 CARMIL2Q6F5E8 1435 aa41.16■■■■■ 4.18
NME3-206ENST00000564252 FAM69CQ0P6D2 419 aa41.14■■■■■ 4.18
NME3-206ENST00000564252 DIP2BQ9P265 1576 aa41.14■■■■■ 4.18
NME3-206ENST00000564252 RAPGEF2Q9Y4G8 1499 aa41.13■■■■■ 4.17
NME3-206ENST00000564252 TNIKQ9UKE5 1360 aa41.12■■■■■ 4.17
NME3-206ENST00000564252 DISP1Q96F81 1524 aa41.03■■■■■ 4.16
NME3-206ENST00000564252 TTBK1Q5TCY1 1321 aaPredicted RBP41.03■■■■■ 4.16
NME3-206ENST00000564252 UGGT2Q9NYU1 1516 aa40.98■■■■■ 4.15
NME3-206ENST00000564252 ABCC2Q92887 1545 aa40.97■■■■■ 4.15
NME3-206ENST00000564252 AEBP2Q6ZN18 517 aaPredicted RBP40.92■■■■■ 4.14
NME3-206ENST00000564252 UHRF1BP1LA0JNW5 1464 aa40.91■■■■■ 4.14
NME3-206ENST00000564252 UACAQ9BZF9 1416 aa40.87■■■■■ 4.13
NME3-206ENST00000564252 KIAA0556O60303 1618 aa40.85■■■■■ 4.13
NME3-206ENST00000564252 CTTNBP2Q8WZ74 1663 aa40.81■■■■■ 4.12
NME3-206ENST00000564252 TSPOAP1O95153 1857 aa40.81■■■■■ 4.12
NME3-206ENST00000564252 ASXL2Q76L83 1435 aa40.8■■■■■ 4.12
NME3-206ENST00000564252 PLB1Q6P1J6 1458 aa40.78■■■■■ 4.12
NME3-206ENST00000564252 PRXQ9BXM0 1461 aa40.76■■■■■ 4.12
NME3-206ENST00000564252 KDM5BQ9UGL1 1544 aa40.73■■■■■ 4.11
NME3-206ENST00000564252 KDM6BO15054 1643 aa40.73■■■■■ 4.11
NME3-206ENST00000564252 GLI2P10070 1586 aa40.7■■■■■ 4.11
NME3-206ENST00000564252 ZCCHC11Q5TAX3 1644 aaKnown RBP40.64■■■■■ 4.1
NME3-206ENST00000564252 GOLGA3Q08378 1498 aa40.62■■■■■ 4.09
NME3-206ENST00000564252 PPRC1Q5VV67 1664 aaKnown RBP40.61■■■■■ 4.09
NME3-206ENST00000564252 EPRSP07814 1512 aaKnown RBP40.57■■■■■ 4.09
NME3-206ENST00000564252 MAP3K4Q9Y6R4 1608 aa40.49■■■■■ 4.07
NME3-206ENST00000564252 ABCA8O94911 1581 aa40.48■■■■■ 4.07
NME3-206ENST00000564252 WDR7Q9Y4E6 1490 aa40.44■■■■■ 4.06
NME3-206ENST00000564252 CSRNP3Q8WYN3 585 aa40.41■■■■■ 4.06
NME3-206ENST00000564252 TEX14Q8IWB6 1497 aa40.33■■■■■ 4.05
NME3-206ENST00000564252 COL17A1Q9UMD9 1497 aaPredicted RBP40.31■■■■■ 4.04
NME3-206ENST00000564252 EEA1Q15075 1411 aa40.28■■■■■ 4.04
NME3-206ENST00000564252 KDM4FA0A1W2PPD8 638 aa40.28■■■■■ 4.04
NME3-206ENST00000564252 SAMD9Q5K651 1589 aa40.25■■■■■ 4.03
NME3-206ENST00000564252 P3H3Q8IVL6 736 aa40.24■■■■■ 4.03
NME3-206ENST00000564252 CFAP43Q8NDM7 1665 aa40.2■■■■■ 4.03
NME3-206ENST00000564252 KCNH8Q96L42 1107 aa40.17■■■■■ 4.02
NME3-206ENST00000564252 CD109Q6YHK3 1445 aa40.16■■■■■ 4.02
NME3-206ENST00000564252 FAM9AQ8IZU1 332 aaPredicted RBP40.15■■■■■ 4.02
NME3-206ENST00000564252 MAGI3Q5TCQ9 1506 aa40.15■■■■■ 4.02
NME3-206ENST00000564252 ATP10BO94823 1461 aa40.13■■■■■ 4.02
NME3-206ENST00000564252 ARID3CA6NKF2 412 aa40.09■■■■■ 4.01
NME3-206ENST00000564252 RAPGEF6Q8TEU7 1601 aa40.05■■■■■ 4
NME3-206ENST00000564252 KIF21BO75037 1637 aa39.99■■■■□ 3.99
NME3-206ENST00000564252 ADGRL1O94910 1474 aa39.99■■■■□ 3.99
NME3-206ENST00000564252 FHOD3Q2V2M9 1422 aa39.95■■■■□ 3.99
NME3-206ENST00000564252 RANGAP1P46060 587 aaPredicted RBP39.94■■■■□ 3.98
NME3-206ENST00000564252 ABCA9Q8IUA7 1624 aa39.92■■■■□ 3.98
NME3-206ENST00000564252 NUP153P49790 1475 aaKnown RBP39.92■■■■□ 3.98
NME3-206ENST00000564252 EFCAB5A4FU69 1503 aa39.85■■■■□ 3.97
NME3-206ENST00000564252 ARAP3Q8WWN8 1544 aa39.83■■■■□ 3.97
NME3-206ENST00000564252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.81■■■■□ 3.96
NME3-206ENST00000564252 HNRNPUL2Q1KMD3 747 aaKnown RBP39.81■■■■□ 3.96
NME3-206ENST00000564252 CHIC1Q5VXU3 224 aa39.76■■■■□ 3.96
NME3-206ENST00000564252 PHLDB1Q86UU1 1377 aa39.73■■■■□ 3.95
NME3-206ENST00000564252 NEO1Q92859 1461 aa39.68■■■■□ 3.94
NME3-206ENST00000564252 PLEKHD1A6NEE1 506 aa39.63■■■■□ 3.93
NME3-206ENST00000564252 EHMT2Q96KQ7 1210 aa39.62■■■■□ 3.93
NME3-206ENST00000564252 UBTFP17480 764 aaKnown RBP39.61■■■■□ 3.93
NME3-206ENST00000564252 RAPGEF3O95398 923 aa39.56■■■■□ 3.92
NME3-206ENST00000564252 FRMPD1Q5SYB0 1578 aa39.55■■■■□ 3.92
NME3-206ENST00000564252 CDK13Q14004 1512 aaKnown RBP39.54■■■■□ 3.92
NME3-206ENST00000564252 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.54■■■■□ 3.923e-22■□□□□ 10.7
NME3-206ENST00000564252 ARHGAP35Q9NRY4 1499 aa39.51■■■■□ 3.92
NME3-206ENST00000564252 TTC37Q6PGP7 1564 aa39.48■■■■□ 3.91
NME3-206ENST00000564252 FMN1Q68DA7 1419 aa39.47■■■■□ 3.91
NME3-206ENST00000564252 FANCAO15360 1455 aa39.43■■■■□ 3.9
NME3-206ENST00000564252 CFAP74Q9C0B2 1584 aa39.43■■■■□ 3.9
NME3-206ENST00000564252 HECW1Q76N89 1606 aa39.43■■■■□ 3.9
NME3-206ENST00000564252 HECW2Q9P2P5 1572 aa39.42■■■■□ 3.9
NME3-206ENST00000564252 AKNAQ7Z591 1439 aa39.41■■■■□ 3.9
NME3-206ENST00000564252 RICTORQ6R327 1708 aa39.39■■■■□ 3.9
NME3-206ENST00000564252 DENND4BO75064 1496 aaPredicted RBP39.38■■■■□ 3.9
NME3-206ENST00000564252 ADAMTSL3P82987 1691 aa39.34■■■■□ 3.89
NME3-206ENST00000564252 ATP1B4Q9UN42 357 aaPredicted RBP39.33■■■■□ 3.89
NME3-206ENST00000564252 ARHGEF40Q8TER5 1519 aa39.31■■■■□ 3.88
NME3-206ENST00000564252 PLCH2O75038 1416 aa39.27■■■■□ 3.88
NME3-206ENST00000564252 BCORL1Q5H9F3 1711 aa39.26■■■■□ 3.88
NME3-206ENST00000564252 ZMYM4Q5VZL5 1548 aa39.24■■■■□ 3.87
NME3-206ENST00000564252 CDK11AQ9UQ88 783 aaPredicted RBP39.22■■■■□ 3.87
NME3-206ENST00000564252 PTPRMP28827 1452 aa39.22■■■■□ 3.87
NME3-206ENST00000564252 LRRIQ1Q96JM4 1722 aa39.21■■■■□ 3.87
NME3-206ENST00000564252 ARID4BQ4LE39 1312 aaPredicted RBP39.19■■■■□ 3.86
NME3-206ENST00000564252 KIF14Q15058 1648 aa39.19■■■■□ 3.86
NME3-206ENST00000564252 MYO5CQ9NQX4 1742 aa39.18■■■■□ 3.86
NME3-206ENST00000564252 MADDQ8WXG6 1647 aa39.17■■■■□ 3.86
NME3-206ENST00000564252 TROQ12816 1431 aaPredicted RBP39.16■■■■□ 3.86
NME3-206ENST00000564252 SCAPERQ9BY12 1400 aa39.14■■■■□ 3.86
NME3-206ENST00000564252 ZFYVE16Q7Z3T8 1539 aa39.14■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 186.3 ms