RNA–Protein interactions for RNA: ENST00000563670.1

HERC2-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene HERC2, Length 618 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-203ENST00000563670 MAPKBP1O60336 1514 aa15.27■□□□□ 0.04
HERC2-203ENST00000563670 CEP170Q5SW79 1584 aa15.26■□□□□ 0.03
HERC2-203ENST00000563670 DISP3Q9P2K9 1392 aa15.23■□□□□ 0.03
HERC2-203ENST00000563670 SHROOM2Q13796 1616 aa15.19■□□□□ 0.02
HERC2-203ENST00000563670 NUP160Q12769 1436 aa15.15■□□□□ 0.02
HERC2-203ENST00000563670 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
HERC2-203ENST00000563670 SUPT5HO00267 1087 aaKnown RBP15.13■□□□□ 0.01
HERC2-203ENST00000563670 NPM1P06748 294 aaKnown RBP eCLIP15.13■□□□□ 0.01
HERC2-203ENST00000563670 POTEDQ86YR6 584 aa15.12■□□□□ 0.01
HERC2-203ENST00000563670 GRIN2AQ12879 1464 aa15.12■□□□□ 0.01
HERC2-203ENST00000563670 FGD5Q6ZNL6 1462 aa15.12■□□□□ 0.01
HERC2-203ENST00000563670 PBRM1Q86U86 1689 aa15.1■□□□□ 0.01
HERC2-203ENST00000563670 TSPOAP1O95153 1857 aa15.08■□□□□ 0.01
HERC2-203ENST00000563670 TOP2BQ02880 1626 aa15.06■□□□□ 0
HERC2-203ENST00000563670 PRG4Q92954 1404 aaPredicted RBP15.03■□□□□ -0
HERC2-203ENST00000563670 ADCY10Q96PN6 1610 aa15.03■□□□□ -0
HERC2-203ENST00000563670 SPATA31D1Q6ZQQ2 1576 aa15.01□□□□□ -0.01
HERC2-203ENST00000563670 COL17A1Q9UMD9 1497 aaPredicted RBP15□□□□□ -0.01
HERC2-203ENST00000563670 ABCA5Q8WWZ7 1642 aa14.99□□□□□ -0.01
HERC2-203ENST00000563670 PPRC1Q5VV67 1664 aaKnown RBP14.98□□□□□ -0.01
HERC2-203ENST00000563670 PIAS4Q8N2W9 510 aaPredicted RBP14.98□□□□□ -0.01
HERC2-203ENST00000563670 ADAMTS12P58397 1594 aa14.95□□□□□ -0.02
HERC2-203ENST00000563670 CUX1P39880 1505 aa14.94□□□□□ -0.02
HERC2-203ENST00000563670 GLI2P10070 1586 aa14.94□□□□□ -0.02
HERC2-203ENST00000563670 ABCA10Q8WWZ4 1543 aa14.93□□□□□ -0.02
HERC2-203ENST00000563670 CERKQ8TCT0 537 aa14.93□□□□□ -0.02
HERC2-203ENST00000563670 JPH4Q96JJ6 628 aa14.93□□□□□ -0.02
HERC2-203ENST00000563670 FHAD1B1AJZ9 1412 aa14.88□□□□□ -0.03
HERC2-203ENST00000563670 PCF11O94913 1555 aaKnown RBP14.85□□□□□ -0.03
HERC2-203ENST00000563670 TEX14Q8IWB6 1497 aa14.84□□□□□ -0.03
HERC2-203ENST00000563670 PTPRMP28827 1452 aa14.82□□□□□ -0.04
HERC2-203ENST00000563670 PLB1Q6P1J6 1458 aa14.82□□□□□ -0.04
HERC2-203ENST00000563670 KCNA4P22459 653 aa14.8□□□□□ -0.04
HERC2-203ENST00000563670 ASXL2Q76L83 1435 aa14.8□□□□□ -0.04
HERC2-203ENST00000563670 MAP3K4Q9Y6R4 1608 aa14.78□□□□□ -0.04
HERC2-203ENST00000563670 RUSC2Q8N2Y8 1516 aa14.78□□□□□ -0.04
HERC2-203ENST00000563670 ABCC2Q92887 1545 aa14.76□□□□□ -0.05
HERC2-203ENST00000563670 ERICH3Q5RHP9 1530 aa14.72□□□□□ -0.05
HERC2-203ENST00000563670 KIAA0586Q9BVV6 1533 aa14.72□□□□□ -0.05
HERC2-203ENST00000563670 ADAMTSL3P82987 1691 aa14.72□□□□□ -0.05
HERC2-203ENST00000563670 EPRSP07814 1512 aaKnown RBP14.71□□□□□ -0.05
HERC2-203ENST00000563670 KIF21BO75037 1637 aa14.7□□□□□ -0.06
HERC2-203ENST00000563670 PPP4R3CPQ6ZMV5 832 aa14.67□□□□□ -0.06
HERC2-203ENST00000563670 PTPRGP23470 1445 aa14.65□□□□□ -0.06
HERC2-203ENST00000563670 UHRF1BP1LA0JNW5 1464 aa14.63□□□□□ -0.07
HERC2-203ENST00000563670 HSPA2P54652 639 aa14.63□□□□□ -0.07
HERC2-203ENST00000563670 WRNQ14191 1432 aaPredicted RBP eCLIP14.63□□□□□ -0.07
HERC2-203ENST00000563670 CUL7Q14999 1698 aa14.59□□□□□ -0.07
HERC2-203ENST00000563670 MAGI3Q5TCQ9 1506 aa14.59□□□□□ -0.07
HERC2-203ENST00000563670 KDM5BQ9UGL1 1544 aa14.56□□□□□ -0.08
HERC2-203ENST00000563670 MADDQ8WXG6 1647 aa14.55□□□□□ -0.08
HERC2-203ENST00000563670 TNIKQ9UKE5 1360 aa14.55□□□□□ -0.08
HERC2-203ENST00000563670 BCORL1Q5H9F3 1711 aa14.55□□□□□ -0.08
HERC2-203ENST00000563670 UACAQ9BZF9 1416 aa14.52□□□□□ -0.08
HERC2-203ENST00000563670 ARAP3Q8WWN8 1544 aa14.51□□□□□ -0.09
HERC2-203ENST00000563670 NCBP3Q53F19 620 aaKnown RBP14.51□□□□□ -0.09
HERC2-203ENST00000563670 IQSEC2Q5JU85 1478 aa14.5□□□□□ -0.09
HERC2-203ENST00000563670 CD109Q6YHK3 1445 aa14.49□□□□□ -0.09
HERC2-203ENST00000563670 DMRT2Q9Y5R5 561 aa14.48□□□□□ -0.09
HERC2-203ENST00000563670 WDR7Q9Y4E6 1490 aa14.48□□□□□ -0.09
HERC2-203ENST00000563670 CARMIL2Q6F5E8 1435 aa14.47□□□□□ -0.09
HERC2-203ENST00000563670 CFAP43Q8NDM7 1665 aa14.46□□□□□ -0.09
HERC2-203ENST00000563670 YEATS2Q9ULM3 1422 aa14.46□□□□□ -0.09
HERC2-203ENST00000563670 ZCCHC11Q5TAX3 1644 aaKnown RBP14.45□□□□□ -0.1
HERC2-203ENST00000563670 RIMS1Q86UR5 1692 aaKnown RBP14.44□□□□□ -0.1
HERC2-203ENST00000563670 TTBK1Q5TCY1 1321 aaPredicted RBP14.43□□□□□ -0.1
HERC2-203ENST00000563670 MSH5O43196 834 aa14.43□□□□□ -0.1
HERC2-203ENST00000563670 BIVM-ERCC5R4GMW8 1640 aa14.43□□□□□ -0.1
HERC2-203ENST00000563670 MED1Q15648 1581 aaPredicted RBP14.4□□□□□ -0.1
HERC2-203ENST00000563670 LTBP4Q8N2S1 1624 aa14.4□□□□□ -0.1
HERC2-203ENST00000563670 ARID4BQ4LE39 1312 aaPredicted RBP14.39□□□□□ -0.11
HERC2-203ENST00000563670 PHLDB1Q86UU1 1377 aa14.38□□□□□ -0.11
HERC2-203ENST00000563670 PTPRTO14522 1441 aa14.37□□□□□ -0.11
HERC2-203ENST00000563670 STRCQ7RTU9 1775 aa14.37□□□□□ -0.11
HERC2-203ENST00000563670 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
HERC2-203ENST00000563670 DISP1Q96F81 1524 aa14.31□□□□□ -0.12
HERC2-203ENST00000563670 PREX1Q8TCU6 1659 aa14.3□□□□□ -0.12
HERC2-203ENST00000563670 RAPGEF3O95398 923 aa14.3□□□□□ -0.12
HERC2-203ENST00000563670 EHMT2Q96KQ7 1210 aa14.3□□□□□ -0.12
HERC2-203ENST00000563670 TTC37Q6PGP7 1564 aa14.3□□□□□ -0.12
HERC2-203ENST00000563670 POGZQ7Z3K3 1410 aa14.29□□□□□ -0.12
HERC2-203ENST00000563670 ARHGEF40Q8TER5 1519 aa14.29□□□□□ -0.12
HERC2-203ENST00000563670 FRMPD1Q5SYB0 1578 aa14.28□□□□□ -0.12
HERC2-203ENST00000563670 KCNH8Q96L42 1107 aa14.27□□□□□ -0.13
HERC2-203ENST00000563670 UBAP1LF5GYI3 381 aa14.25□□□□□ -0.13
HERC2-203ENST00000563670 IQGAP2Q13576 1575 aa14.25□□□□□ -0.13
HERC2-203ENST00000563670 FANCAO15360 1455 aa14.25□□□□□ -0.13
HERC2-203ENST00000563670 IGF1RP08069 1367 aa14.24□□□□□ -0.13
HERC2-203ENST00000563670 SLC4A1APQ9BWU0 796 aaKnown RBP14.24□□□□□ -0.13
HERC2-203ENST00000563670 NEO1Q92859 1461 aa14.24□□□□□ -0.13
HERC2-203ENST00000563670 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
HERC2-203ENST00000563670 UHRF1BP1Q6BDS2 1440 aa14.2□□□□□ -0.14
HERC2-203ENST00000563670 NPM3O75607 178 aaKnown RBP14.19□□□□□ -0.14
HERC2-203ENST00000563670 HSPA1LP34931 641 aa14.19□□□□□ -0.14
HERC2-203ENST00000563670 AKNAQ7Z591 1439 aa14.17□□□□□ -0.14
HERC2-203ENST00000563670 KIF27Q86VH2 1401 aa14.17□□□□□ -0.14
HERC2-203ENST00000563670 FER1L4A9Z1Z3 1794 aa14.17□□□□□ -0.14
HERC2-203ENST00000563670 UGGT2Q9NYU1 1516 aa14.16□□□□□ -0.14
HERC2-203ENST00000563670 ABCA9Q8IUA7 1624 aa14.15□□□□□ -0.14
HERC2-203ENST00000563670 SIGLEC1Q9BZZ2 1709 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms