RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 KIF21BO75037 1637 aa25.06■■□□□ 1.6
PDXDC1-209ENST00000563667 CARMIL1Q5VZK9 1371 aa25.05■■□□□ 1.6
PDXDC1-209ENST00000563667 PRXQ9BXM0 1461 aa25.05■■□□□ 1.6
PDXDC1-209ENST00000563667 NUP160Q12769 1436 aa25.04■■□□□ 1.6
PDXDC1-209ENST00000563667 GOLGA3Q08378 1498 aa25.04■■□□□ 1.6
PDXDC1-209ENST00000563667 CEP170Q5SW79 1584 aa25.04■■□□□ 1.6
PDXDC1-209ENST00000563667 UBTFP17480 764 aaKnown RBP25.02■■□□□ 1.6
PDXDC1-209ENST00000563667 RAPGEF2Q9Y4G8 1499 aa25■■□□□ 1.59
PDXDC1-209ENST00000563667 CUL7Q14999 1698 aa24.99■■□□□ 1.59
PDXDC1-209ENST00000563667 TNIKQ9UKE5 1360 aa24.88■■□□□ 1.57
PDXDC1-209ENST00000563667 ERCC6L2Q5T890 1561 aa24.85■■□□□ 1.57
PDXDC1-209ENST00000563667 JPH4Q96JJ6 628 aa24.85■■□□□ 1.57
PDXDC1-209ENST00000563667 SHROOM2Q13796 1616 aa24.83■■□□□ 1.57
PDXDC1-209ENST00000563667 PRG4Q92954 1404 aaPredicted RBP24.83■■□□□ 1.57
PDXDC1-209ENST00000563667 TRHP20396 242 aaPredicted RBP24.79■■□□□ 1.56
PDXDC1-209ENST00000563667 KIAA0586Q9BVV6 1533 aa24.77■■□□□ 1.56
PDXDC1-209ENST00000563667 RANGAP1P46060 587 aaPredicted RBP24.75■■□□□ 1.55
PDXDC1-209ENST00000563667 CEP162Q5TB80 1403 aa24.71■■□□□ 1.55
PDXDC1-209ENST00000563667 CTTNBP2Q8WZ74 1663 aa24.64■■□□□ 1.53
PDXDC1-209ENST00000563667 CLIP1P30622 1438 aa24.63■■□□□ 1.53
PDXDC1-209ENST00000563667 IQGAP2Q13576 1575 aa24.6■■□□□ 1.53
PDXDC1-209ENST00000563667 TTBK1Q5TCY1 1321 aaPredicted RBP24.58■■□□□ 1.52
PDXDC1-209ENST00000563667 CARMIL2Q6F5E8 1435 aa24.57■■□□□ 1.52
PDXDC1-209ENST00000563667 NPM1P06748 294 aaKnown RBP eCLIP24.52■■□□□ 1.52
PDXDC1-209ENST00000563667 PTPRGP23470 1445 aa24.51■■□□□ 1.51
PDXDC1-209ENST00000563667 P3H3Q8IVL6 736 aa24.47■■□□□ 1.51
PDXDC1-209ENST00000563667 ARHGAP35Q9NRY4 1499 aa24.46■■□□□ 1.51
PDXDC1-209ENST00000563667 DISP1Q96F81 1524 aa24.43■■□□□ 1.5
PDXDC1-209ENST00000563667 UGGT2Q9NYU1 1516 aa24.43■■□□□ 1.5
PDXDC1-209ENST00000563667 EFCAB5A4FU69 1503 aa24.42■■□□□ 1.5
PDXDC1-209ENST00000563667 ADCY10Q96PN6 1610 aa24.42■■□□□ 1.5
PDXDC1-209ENST00000563667 FHOD3Q2V2M9 1422 aa24.36■■□□□ 1.49
PDXDC1-209ENST00000563667 KIAA0556O60303 1618 aa24.36■■□□□ 1.49
PDXDC1-209ENST00000563667 SAMD9Q5K651 1589 aa24.36■■□□□ 1.49
PDXDC1-209ENST00000563667 VPS8Q8N3P4 1428 aa24.34■■□□□ 1.49
PDXDC1-209ENST00000563667 UACAQ9BZF9 1416 aa24.31■■□□□ 1.48
PDXDC1-209ENST00000563667 MAPKBP1O60336 1514 aa24.3■■□□□ 1.48
PDXDC1-209ENST00000563667 FAM69CQ0P6D2 419 aa24.29■■□□□ 1.48
PDXDC1-209ENST00000563667 ABCC2Q92887 1545 aa24.28■■□□□ 1.48
PDXDC1-209ENST00000563667 AEBP2Q6ZN18 517 aaPredicted RBP24.27■■□□□ 1.48
PDXDC1-209ENST00000563667 UHRF1BP1LA0JNW5 1464 aa24.26■■□□□ 1.47
PDXDC1-209ENST00000563667 ABCC10Q5T3U5 1492 aa24.26■■□□□ 1.47
PDXDC1-209ENST00000563667 FMN1Q68DA7 1419 aa24.23■■□□□ 1.47
PDXDC1-209ENST00000563667 ATP1B4Q9UN42 357 aaPredicted RBP24.21■■□□□ 1.47
PDXDC1-209ENST00000563667 APLP2Q06481 763 aa24.2■■□□□ 1.46
PDXDC1-209ENST00000563667 KIF13AQ9H1H9 1805 aa24.19■■□□□ 1.46
PDXDC1-209ENST00000563667 DIP2BQ9P265 1576 aa24.18■■□□□ 1.46
PDXDC1-209ENST00000563667 PLB1Q6P1J6 1458 aa24.18■■□□□ 1.46
PDXDC1-209ENST00000563667 ASXL2Q76L83 1435 aa24.17■■□□□ 1.46
PDXDC1-209ENST00000563667 KDM5BQ9UGL1 1544 aa24.14■■□□□ 1.45
PDXDC1-209ENST00000563667 PCF11O94913 1555 aaKnown RBP24.13■■□□□ 1.45
PDXDC1-209ENST00000563667 CASKIN1Q8WXD9 1431 aa24.12■■□□□ 1.45
PDXDC1-209ENST00000563667 PPARGC1BQ86YN6 1023 aaKnown RBP24.12■■□□□ 1.45
PDXDC1-209ENST00000563667 ZCCHC11Q5TAX3 1644 aaKnown RBP24.1■■□□□ 1.45
PDXDC1-209ENST00000563667 ABCA8O94911 1581 aa24.09■■□□□ 1.45
PDXDC1-209ENST00000563667 FYCO1Q9BQS8 1478 aa24.09■■□□□ 1.45
PDXDC1-209ENST00000563667 ARID3CA6NKF2 412 aa24.05■■□□□ 1.44
PDXDC1-209ENST00000563667 EPRSP07814 1512 aaKnown RBP24.01■■□□□ 1.43
PDXDC1-209ENST00000563667 HECW1Q76N89 1606 aa24.01■■□□□ 1.43
PDXDC1-209ENST00000563667 RAPGEF6Q8TEU7 1601 aa24.01■■□□□ 1.43
PDXDC1-209ENST00000563667 WDR7Q9Y4E6 1490 aa24■■□□□ 1.43
PDXDC1-209ENST00000563667 GLI2P10070 1586 aa23.99■■□□□ 1.43
PDXDC1-209ENST00000563667 TSPOAP1O95153 1857 aa23.98■■□□□ 1.43
PDXDC1-209ENST00000563667 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.97■■□□□ 1.43
PDXDC1-209ENST00000563667 HNRNPUL2Q1KMD3 747 aaKnown RBP23.97■■□□□ 1.43
PDXDC1-209ENST00000563667 KCNH8Q96L42 1107 aa23.97■■□□□ 1.43
PDXDC1-209ENST00000563667 TIAM1Q13009 1591 aa23.95■■□□□ 1.43
PDXDC1-209ENST00000563667 MAP3K1Q13233 1512 aa23.94■■□□□ 1.42
PDXDC1-209ENST00000563667 KANK4Q5T7N3 995 aaPredicted RBP23.94■■□□□ 1.42
PDXDC1-209ENST00000563667 NUP153P49790 1475 aaKnown RBP23.93■■□□□ 1.42
PDXDC1-209ENST00000563667 CCDC18Q5T9S5 1454 aa23.93■■□□□ 1.42
PDXDC1-209ENST00000563667 ATP10BO94823 1461 aa23.92■■□□□ 1.42
PDXDC1-209ENST00000563667 CFAP43Q8NDM7 1665 aa23.92■■□□□ 1.42
PDXDC1-209ENST00000563667 KDM6BO15054 1643 aa23.9■■□□□ 1.42
PDXDC1-209ENST00000563667 LRRIQ1Q96JM4 1722 aa23.9■■□□□ 1.42
PDXDC1-209ENST00000563667 CDK13Q14004 1512 aaKnown RBP23.89■■□□□ 1.41
PDXDC1-209ENST00000563667 MAP3K4Q9Y6R4 1608 aa23.87■■□□□ 1.41
PDXDC1-209ENST00000563667 LRRC9Q6ZRR7 1453 aa23.86■■□□□ 1.41
PDXDC1-209ENST00000563667 TEX14Q8IWB6 1497 aa23.85■■□□□ 1.41
PDXDC1-209ENST00000563667 MTUS2Q5JR59 1369 aa23.84■■□□□ 1.41
PDXDC1-209ENST00000563667 PPRC1Q5VV67 1664 aaKnown RBP23.83■■□□□ 1.41
PDXDC1-209ENST00000563667 CD109Q6YHK3 1445 aa23.83■■□□□ 1.4
PDXDC1-209ENST00000563667 CDK11AQ9UQ88 783 aaPredicted RBP23.82■■□□□ 1.4
PDXDC1-209ENST00000563667 PLEKHD1A6NEE1 506 aa23.78■■□□□ 1.4
PDXDC1-209ENST00000563667 TRIM26Q12899 539 aaPredicted RBP23.76■■□□□ 1.39
PDXDC1-209ENST00000563667 EHBP1L1Q8N3D4 1523 aa23.75■■□□□ 1.39
PDXDC1-209ENST00000563667 MAGI3Q5TCQ9 1506 aa23.74■■□□□ 1.39
PDXDC1-209ENST00000563667 COL17A1Q9UMD9 1497 aaPredicted RBP23.68■■□□□ 1.38
PDXDC1-209ENST00000563667 TROQ12816 1431 aaPredicted RBP23.68■■□□□ 1.38
PDXDC1-209ENST00000563667 ABCA9Q8IUA7 1624 aa23.67■■□□□ 1.38
PDXDC1-209ENST00000563667 SUPT6HQ7KZ85 1726 aaKnown RBP23.67■■□□□ 1.38
PDXDC1-209ENST00000563667 PCGF6Q9BYE7 350 aa23.66■■□□□ 1.38
PDXDC1-209ENST00000563667 NCOA2Q15596 1464 aa23.65■■□□□ 1.38
PDXDC1-209ENST00000563667 PHLDB1Q86UU1 1377 aa23.62■■□□□ 1.37
PDXDC1-209ENST00000563667 KIF14Q15058 1648 aa23.56■■□□□ 1.36
PDXDC1-209ENST00000563667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.55■■□□□ 1.362e-7■■■■■ 47.7
PDXDC1-209ENST00000563667 NEO1Q92859 1461 aa23.55■■□□□ 1.36
PDXDC1-209ENST00000563667 CCNB3Q8WWL7 1395 aa23.54■■□□□ 1.36
PDXDC1-209ENST00000563667 ARAP3Q8WWN8 1544 aa23.54■■□□□ 1.36
PDXDC1-209ENST00000563667 MYOM3Q5VTT5 1437 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms