RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 RAPGEF2Q9Y4G8 1499 aa24.76■■□□□ 1.55
SCAMP2-203ENST00000563663 KIAA0586Q9BVV6 1533 aa24.69■■□□□ 1.54
SCAMP2-203ENST00000563663 ERCC6L2Q5T890 1561 aa24.68■■□□□ 1.54
SCAMP2-203ENST00000563663 CSRNP3Q8WYN3 585 aa24.67■■□□□ 1.54
SCAMP2-203ENST00000563663 ARAP1Q96P48 1450 aa24.64■■□□□ 1.54
SCAMP2-203ENST00000563663 IQGAP2Q13576 1575 aa24.6■■□□□ 1.53
SCAMP2-203ENST00000563663 KIF21BO75037 1637 aa24.6■■□□□ 1.53
SCAMP2-203ENST00000563663 CTTNBP2Q8WZ74 1663 aa24.59■■□□□ 1.53
SCAMP2-203ENST00000563663 FAM9AQ8IZU1 332 aaPredicted RBP24.57■■□□□ 1.52
SCAMP2-203ENST00000563663 JPH4Q96JJ6 628 aa24.56■■□□□ 1.52
SCAMP2-203ENST00000563663 PRG4Q92954 1404 aaPredicted RBP24.54■■□□□ 1.52
SCAMP2-203ENST00000563663 UGGT2Q9NYU1 1516 aa24.5■■□□□ 1.51
SCAMP2-203ENST00000563663 DISP1Q96F81 1524 aa24.47■■□□□ 1.51
SCAMP2-203ENST00000563663 CYB5RLQ6IPT4 315 aa24.42■■□□□ 1.5
SCAMP2-203ENST00000563663 KIAA0556O60303 1618 aa24.39■■□□□ 1.5
SCAMP2-203ENST00000563663 GOLGA3Q08378 1498 aa24.38■■□□□ 1.49
SCAMP2-203ENST00000563663 SAMD9Q5K651 1589 aa24.32■■□□□ 1.48
SCAMP2-203ENST00000563663 CARMIL2Q6F5E8 1435 aa24.31■■□□□ 1.48
SCAMP2-203ENST00000563663 TNIKQ9UKE5 1360 aa24.28■■□□□ 1.48
SCAMP2-203ENST00000563663 ADCY10Q96PN6 1610 aa24.26■■□□□ 1.47
SCAMP2-203ENST00000563663 PTPRGP23470 1445 aa24.23■■□□□ 1.47
SCAMP2-203ENST00000563663 EHMT2Q96KQ7 1210 aa24.21■■□□□ 1.47
SCAMP2-203ENST00000563663 EFCAB5A4FU69 1503 aa24.17■■□□□ 1.46
SCAMP2-203ENST00000563663 UBTFP17480 764 aaKnown RBP24.16■■□□□ 1.46
SCAMP2-203ENST00000563663 UHRF1BP1LA0JNW5 1464 aa24.14■■□□□ 1.46
SCAMP2-203ENST00000563663 ABCA8O94911 1581 aa24.13■■□□□ 1.45
SCAMP2-203ENST00000563663 ABCC2Q92887 1545 aa24.12■■□□□ 1.45
SCAMP2-203ENST00000563663 ARHGAP35Q9NRY4 1499 aa24.12■■□□□ 1.45
SCAMP2-203ENST00000563663 UACAQ9BZF9 1416 aa24.11■■□□□ 1.45
SCAMP2-203ENST00000563663 PLB1Q6P1J6 1458 aa24.11■■□□□ 1.45
SCAMP2-203ENST00000563663 FHOD3Q2V2M9 1422 aa24.09■■□□□ 1.45
SCAMP2-203ENST00000563663 P3H3Q8IVL6 736 aa24.07■■□□□ 1.44
SCAMP2-203ENST00000563663 TTBK1Q5TCY1 1321 aaPredicted RBP24.07■■□□□ 1.44
SCAMP2-203ENST00000563663 RANGAP1P46060 587 aaPredicted RBP24.04■■□□□ 1.44
SCAMP2-203ENST00000563663 MAPKBP1O60336 1514 aa24.04■■□□□ 1.44
SCAMP2-203ENST00000563663 KDM5BQ9UGL1 1544 aa24.04■■□□□ 1.44
SCAMP2-203ENST00000563663 ZCCHC11Q5TAX3 1644 aaKnown RBP24■■□□□ 1.43
SCAMP2-203ENST00000563663 RAPGEF6Q8TEU7 1601 aa23.99■■□□□ 1.43
SCAMP2-203ENST00000563663 LOC105371045A0A1W2PR82 267 aa23.96■■□□□ 1.43
SCAMP2-203ENST00000563663 KIF13AQ9H1H9 1805 aa23.94■■□□□ 1.42
SCAMP2-203ENST00000563663 NUP153P49790 1475 aaKnown RBP23.94■■□□□ 1.42
SCAMP2-203ENST00000563663 CLIP1P30622 1438 aa23.93■■□□□ 1.42
SCAMP2-203ENST00000563663 CEP162Q5TB80 1403 aa23.9■■□□□ 1.42
SCAMP2-203ENST00000563663 DIP2BQ9P265 1576 aa23.89■■□□□ 1.42
SCAMP2-203ENST00000563663 ATP10BO94823 1461 aa23.89■■□□□ 1.41
SCAMP2-203ENST00000563663 ASXL2Q76L83 1435 aa23.88■■□□□ 1.41
SCAMP2-203ENST00000563663 FMN1Q68DA7 1419 aa23.88■■□□□ 1.41
SCAMP2-203ENST00000563663 ABCC10Q5T3U5 1492 aa23.87■■□□□ 1.41
SCAMP2-203ENST00000563663 NPM1P06748 294 aaKnown RBP eCLIP23.86■■□□□ 1.41
SCAMP2-203ENST00000563663 LRRIQ1Q96JM4 1722 aa23.84■■□□□ 1.41
SCAMP2-203ENST00000563663 PCF11O94913 1555 aaKnown RBP23.82■■□□□ 1.4
SCAMP2-203ENST00000563663 WDR7Q9Y4E6 1490 aa23.8■■□□□ 1.4
SCAMP2-203ENST00000563663 HECW1Q76N89 1606 aa23.8■■□□□ 1.4
SCAMP2-203ENST00000563663 GLI2P10070 1586 aa23.78■■□□□ 1.4
SCAMP2-203ENST00000563663 EPRSP07814 1512 aaKnown RBP23.77■■□□□ 1.4
SCAMP2-203ENST00000563663 TRHP20396 242 aaPredicted RBP23.77■■□□□ 1.4
SCAMP2-203ENST00000563663 CDK13Q14004 1512 aaKnown RBP23.76■■□□□ 1.39
SCAMP2-203ENST00000563663 CASKIN1Q8WXD9 1431 aa23.76■■□□□ 1.39
SCAMP2-203ENST00000563663 ARID3CA6NKF2 412 aa23.75■■□□□ 1.39
SCAMP2-203ENST00000563663 FYCO1Q9BQS8 1478 aa23.73■■□□□ 1.39
SCAMP2-203ENST00000563663 MAP3K4Q9Y6R4 1608 aa23.7■■□□□ 1.39
SCAMP2-203ENST00000563663 PPRC1Q5VV67 1664 aaKnown RBP23.7■■□□□ 1.38
SCAMP2-203ENST00000563663 FAM69CQ0P6D2 419 aa23.69■■□□□ 1.38
SCAMP2-203ENST00000563663 TSPOAP1O95153 1857 aa23.63■■□□□ 1.37
SCAMP2-203ENST00000563663 ABCA9Q8IUA7 1624 aa23.63■■□□□ 1.37
SCAMP2-203ENST00000563663 CFAP43Q8NDM7 1665 aa23.62■■□□□ 1.37
SCAMP2-203ENST00000563663 CCDC18Q5T9S5 1454 aa23.62■■□□□ 1.37
SCAMP2-203ENST00000563663 MAGI3Q5TCQ9 1506 aa23.61■■□□□ 1.37
SCAMP2-203ENST00000563663 VPS8Q8N3P4 1428 aa23.6■■□□□ 1.37
SCAMP2-203ENST00000563663 KIF14Q15058 1648 aa23.55■■□□□ 1.36
SCAMP2-203ENST00000563663 TTC37Q6PGP7 1564 aa23.55■■□□□ 1.36
SCAMP2-203ENST00000563663 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.55■■□□□ 1.36
SCAMP2-203ENST00000563663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.55■■□□□ 1.36
SCAMP2-203ENST00000563663 HNRNPUL2Q1KMD3 747 aaKnown RBP23.55■■□□□ 1.36
SCAMP2-203ENST00000563663 KCNH8Q96L42 1107 aa23.55■■□□□ 1.36
SCAMP2-203ENST00000563663 ATP1B4Q9UN42 357 aaPredicted RBP23.55■■□□□ 1.36
SCAMP2-203ENST00000563663 TROQ12816 1431 aaPredicted RBP23.54■■□□□ 1.36
SCAMP2-203ENST00000563663 PLEKHD1A6NEE1 506 aa23.52■■□□□ 1.36
SCAMP2-203ENST00000563663 CD109Q6YHK3 1445 aa23.5■■□□□ 1.35
SCAMP2-203ENST00000563663 TIAM1Q13009 1591 aa23.46■■□□□ 1.35
SCAMP2-203ENST00000563663 TEX14Q8IWB6 1497 aa23.43■■□□□ 1.34
SCAMP2-203ENST00000563663 CDK11AQ9UQ88 783 aaPredicted RBP23.43■■□□□ 1.34
SCAMP2-203ENST00000563663 COL17A1Q9UMD9 1497 aaPredicted RBP23.43■■□□□ 1.34
SCAMP2-203ENST00000563663 MAP3K1Q13233 1512 aa23.42■■□□□ 1.34
SCAMP2-203ENST00000563663 MYO5CQ9NQX4 1742 aa23.39■■□□□ 1.34
SCAMP2-203ENST00000563663 EHBP1L1Q8N3D4 1523 aa23.39■■□□□ 1.34
SCAMP2-203ENST00000563663 KDM6BO15054 1643 aa23.39■■□□□ 1.33
SCAMP2-203ENST00000563663 ARAP3Q8WWN8 1544 aa23.38■■□□□ 1.33
SCAMP2-203ENST00000563663 CDC42BPAQ5VT25 1732 aa23.37■■□□□ 1.33
SCAMP2-203ENST00000563663 CDC42BPBQ9Y5S2 1711 aa23.36■■□□□ 1.33
SCAMP2-203ENST00000563663 PLCH2O75038 1416 aa23.36■■□□□ 1.33
SCAMP2-203ENST00000563663 NEO1Q92859 1461 aa23.35■■□□□ 1.33
SCAMP2-203ENST00000563663 PREX2Q70Z35 1606 aa23.34■■□□□ 1.33
SCAMP2-203ENST00000563663 LRRC9Q6ZRR7 1453 aa23.33■■□□□ 1.32
SCAMP2-203ENST00000563663 MTUS2Q5JR59 1369 aa23.32■■□□□ 1.32
SCAMP2-203ENST00000563663 FANCAO15360 1455 aa23.32■■□□□ 1.32
SCAMP2-203ENST00000563663 CFAP74Q9C0B2 1584 aa23.3■■□□□ 1.32
SCAMP2-203ENST00000563663 GPATCH8Q9UKJ3 1502 aaKnown RBP23.28■■□□□ 1.32
SCAMP2-203ENST00000563663 FRMPD1Q5SYB0 1578 aa23.28■■□□□ 1.32
SCAMP2-203ENST00000563663 KANK4Q5T7N3 995 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms