RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 RUSC2Q8N2Y8 1516 aa30.12■■■□□ 2.41
TSC2-219ENST00000563346 IGF1RP08069 1367 aa30.09■■■□□ 2.41
TSC2-219ENST00000563346 CUL7Q14999 1698 aa30.07■■■□□ 2.41
TSC2-219ENST00000563346 KIAA0586Q9BVV6 1533 aa29.98■■■□□ 2.39
TSC2-219ENST00000563346 CARMIL1Q5VZK9 1371 aa29.92■■■□□ 2.38
TSC2-219ENST00000563346 NPM1P06748 294 aaKnown RBP eCLIP29.87■■■□□ 2.37
TSC2-219ENST00000563346 KIF13AQ9H1H9 1805 aa29.8■■■□□ 2.36
TSC2-219ENST00000563346 ADCY10Q96PN6 1610 aa29.78■■■□□ 2.36
TSC2-219ENST00000563346 MAPKBP1O60336 1514 aa29.73■■■□□ 2.35
TSC2-219ENST00000563346 IQGAP2Q13576 1575 aa29.73■■■□□ 2.35
TSC2-219ENST00000563346 CARMIL2Q6F5E8 1435 aa29.72■■■□□ 2.35
TSC2-219ENST00000563346 PTPRGP23470 1445 aa29.71■■■□□ 2.35
TSC2-219ENST00000563346 TTBK1Q5TCY1 1321 aaPredicted RBP29.71■■■□□ 2.35
TSC2-219ENST00000563346 FAM69CQ0P6D2 419 aa29.7■■■□□ 2.35
TSC2-219ENST00000563346 ABCC10Q5T3U5 1492 aa29.69■■■□□ 2.34
TSC2-219ENST00000563346 RAPGEF2Q9Y4G8 1499 aa29.67■■■□□ 2.34
TSC2-219ENST00000563346 TNIKQ9UKE5 1360 aa29.65■■■□□ 2.34
TSC2-219ENST00000563346 DIP2BQ9P265 1576 aa29.63■■■□□ 2.33
TSC2-219ENST00000563346 DISP1Q96F81 1524 aa29.54■■■□□ 2.32
TSC2-219ENST00000563346 ABCC2Q92887 1545 aa29.52■■■□□ 2.32
TSC2-219ENST00000563346 UGGT2Q9NYU1 1516 aa29.51■■■□□ 2.32
TSC2-219ENST00000563346 UACAQ9BZF9 1416 aa29.47■■■□□ 2.31
TSC2-219ENST00000563346 UHRF1BP1LA0JNW5 1464 aa29.47■■■□□ 2.31
TSC2-219ENST00000563346 TSPOAP1O95153 1857 aa29.46■■■□□ 2.31
TSC2-219ENST00000563346 KIAA0556O60303 1618 aa29.45■■■□□ 2.3
TSC2-219ENST00000563346 CTTNBP2Q8WZ74 1663 aa29.44■■■□□ 2.3
TSC2-219ENST00000563346 ASXL2Q76L83 1435 aa29.42■■■□□ 2.3
TSC2-219ENST00000563346 PLB1Q6P1J6 1458 aa29.41■■■□□ 2.3
TSC2-219ENST00000563346 KDM6BO15054 1643 aa29.38■■■□□ 2.29
TSC2-219ENST00000563346 PRXQ9BXM0 1461 aa29.35■■■□□ 2.29
TSC2-219ENST00000563346 KDM4FA0A1W2PPD8 638 aa29.33■■■□□ 2.29
TSC2-219ENST00000563346 KDM5BQ9UGL1 1544 aa29.33■■■□□ 2.29
TSC2-219ENST00000563346 GOLGA3Q08378 1498 aa29.32■■■□□ 2.28
TSC2-219ENST00000563346 GLI2P10070 1586 aa29.31■■■□□ 2.28
TSC2-219ENST00000563346 ZCCHC11Q5TAX3 1644 aaKnown RBP29.3■■■□□ 2.28
TSC2-219ENST00000563346 EPRSP07814 1512 aaKnown RBP29.23■■■□□ 2.27
TSC2-219ENST00000563346 PPRC1Q5VV67 1664 aaKnown RBP29.21■■■□□ 2.27
TSC2-219ENST00000563346 CSRNP3Q8WYN3 585 aa29.18■■■□□ 2.26
TSC2-219ENST00000563346 MAP3K4Q9Y6R4 1608 aa29.16■■■□□ 2.26
TSC2-219ENST00000563346 ABCA8O94911 1581 aa29.15■■■□□ 2.26
TSC2-219ENST00000563346 FAM9AQ8IZU1 332 aaPredicted RBP29.15■■■□□ 2.26
TSC2-219ENST00000563346 WDR7Q9Y4E6 1490 aa29.15■■■□□ 2.26
TSC2-219ENST00000563346 TEX14Q8IWB6 1497 aa29.11■■■□□ 2.25
TSC2-219ENST00000563346 P3H3Q8IVL6 736 aa29.09■■■□□ 2.25
TSC2-219ENST00000563346 EEA1Q15075 1411 aa29.08■■■□□ 2.25
TSC2-219ENST00000563346 KCNH8Q96L42 1107 aa29.04■■■□□ 2.24
TSC2-219ENST00000563346 ILDR1Q86SU0 546 aaPredicted RBP29.01■■■□□ 2.23
TSC2-219ENST00000563346 COL17A1Q9UMD9 1497 aaPredicted RBP28.99■■■□□ 2.23
TSC2-219ENST00000563346 ADGRL1O94910 1474 aa28.98■■■□□ 2.23
TSC2-219ENST00000563346 SAMD9Q5K651 1589 aa28.98■■■□□ 2.23
TSC2-219ENST00000563346 ARID3CA6NKF2 412 aa28.98■■■□□ 2.23
TSC2-219ENST00000563346 CFAP43Q8NDM7 1665 aa28.98■■■□□ 2.23
TSC2-219ENST00000563346 CD109Q6YHK3 1445 aa28.97■■■□□ 2.23
TSC2-219ENST00000563346 RANGAP1P46060 587 aaPredicted RBP28.93■■■□□ 2.22
TSC2-219ENST00000563346 MAGI3Q5TCQ9 1506 aa28.92■■■□□ 2.22
TSC2-219ENST00000563346 ATP10BO94823 1461 aa28.91■■■□□ 2.22
TSC2-219ENST00000563346 RAPGEF6Q8TEU7 1601 aa28.89■■■□□ 2.22
TSC2-219ENST00000563346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.85■■■□□ 2.21
TSC2-219ENST00000563346 HNRNPUL2Q1KMD3 747 aaKnown RBP28.85■■■□□ 2.21
TSC2-219ENST00000563346 KIF21BO75037 1637 aa28.83■■■□□ 2.21
TSC2-219ENST00000563346 FHOD3Q2V2M9 1422 aa28.81■■■□□ 2.2
TSC2-219ENST00000563346 HECW2Q9P2P5 1572 aa28.76■■■□□ 2.19
TSC2-219ENST00000563346 ABCA9Q8IUA7 1624 aa28.76■■■□□ 2.19
TSC2-219ENST00000563346 NUP153P49790 1475 aaKnown RBP28.75■■■□□ 2.19
TSC2-219ENST00000563346 EFCAB5A4FU69 1503 aa28.74■■■□□ 2.19
TSC2-219ENST00000563346 ARAP3Q8WWN8 1544 aa28.69■■■□□ 2.18
TSC2-219ENST00000563346 CHIC1Q5VXU3 224 aa28.69■■■□□ 2.18
TSC2-219ENST00000563346 EHMT2Q96KQ7 1210 aa28.69■■■□□ 2.18
TSC2-219ENST00000563346 UBTFP17480 764 aaKnown RBP28.67■■■□□ 2.18
TSC2-219ENST00000563346 PHLDB1Q86UU1 1377 aa28.66■■■□□ 2.18
TSC2-219ENST00000563346 PLEKHD1A6NEE1 506 aa28.65■■■□□ 2.18
TSC2-219ENST00000563346 NEO1Q92859 1461 aa28.61■■■□□ 2.17
TSC2-219ENST00000563346 RAPGEF3O95398 923 aa28.55■■■□□ 2.16
TSC2-219ENST00000563346 ATP1B4Q9UN42 357 aaPredicted RBP28.51■■■□□ 2.15
TSC2-219ENST00000563346 FMN1Q68DA7 1419 aa28.5■■■□□ 2.15
TSC2-219ENST00000563346 CDK13Q14004 1512 aaKnown RBP28.49■■■□□ 2.15
TSC2-219ENST00000563346 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.48■■■□□ 2.15
TSC2-219ENST00000563346 ARHGAP35Q9NRY4 1499 aa28.47■■■□□ 2.15
TSC2-219ENST00000563346 CFAP74Q9C0B2 1584 aa28.46■■■□□ 2.15
TSC2-219ENST00000563346 HECW1Q76N89 1606 aa28.45■■■□□ 2.14
TSC2-219ENST00000563346 FANCAO15360 1455 aa28.45■■■□□ 2.14
TSC2-219ENST00000563346 FRMPD1Q5SYB0 1578 aa28.45■■■□□ 2.14
TSC2-219ENST00000563346 TTC37Q6PGP7 1564 aa28.45■■■□□ 2.14
TSC2-219ENST00000563346 AKNAQ7Z591 1439 aa28.43■■■□□ 2.14
TSC2-219ENST00000563346 DENND4BO75064 1496 aaPredicted RBP28.42■■■□□ 2.14
TSC2-219ENST00000563346 CDK11AQ9UQ88 783 aaPredicted RBP28.37■■■□□ 2.13
TSC2-219ENST00000563346 RICTORQ6R327 1708 aa28.37■■■□□ 2.13
TSC2-219ENST00000563346 ARID4BQ4LE39 1312 aaPredicted RBP28.37■■■□□ 2.13
TSC2-219ENST00000563346 ADAMTSL3P82987 1691 aa28.32■■■□□ 2.12
TSC2-219ENST00000563346 ARHGEF40Q8TER5 1519 aa28.32■■■□□ 2.12
TSC2-219ENST00000563346 PLCH2O75038 1416 aa28.31■■■□□ 2.12
TSC2-219ENST00000563346 BCORL1Q5H9F3 1711 aa28.29■■■□□ 2.12
TSC2-219ENST00000563346 MYO5CQ9NQX4 1742 aa28.27■■■□□ 2.12
TSC2-219ENST00000563346 PTPRMP28827 1452 aa28.27■■■□□ 2.12
TSC2-219ENST00000563346 KIF14Q15058 1648 aa28.26■■■□□ 2.11
TSC2-219ENST00000563346 ZMYM4Q5VZL5 1548 aa28.26■■■□□ 2.11
TSC2-219ENST00000563346 CLIP1P30622 1438 aa28.25■■■□□ 2.11
TSC2-219ENST00000563346 TROQ12816 1431 aaPredicted RBP28.25■■■□□ 2.11
TSC2-219ENST00000563346 SCAPERQ9BY12 1400 aa28.25■■■□□ 2.11
TSC2-219ENST00000563346 ZFYVE16Q7Z3T8 1539 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms