RNA–Protein interactions for RNA: ENST00000563275.1

PKM-208, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 699 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-208ENST00000563275 PRG4Q92954 1404 aaPredicted RBP21.72■■□□□ 1.07
PKM-208ENST00000563275 KIAA0586Q9BVV6 1533 aa21.71■■□□□ 1.07
PKM-208ENST00000563275 CARMIL1Q5VZK9 1371 aa21.7■■□□□ 1.06
PKM-208ENST00000563275 TRHP20396 242 aaPredicted RBP21.62■■□□□ 1.05
PKM-208ENST00000563275 RAPGEF2Q9Y4G8 1499 aa21.54■■□□□ 1.04
PKM-208ENST00000563275 IQGAP2Q13576 1575 aa21.51■■□□□ 1.03
PKM-208ENST00000563275 ADCY10Q96PN6 1610 aa21.47■■□□□ 1.03
PKM-208ENST00000563275 PRXQ9BXM0 1461 aa21.45■■□□□ 1.02
PKM-208ENST00000563275 CARMIL2Q6F5E8 1435 aa21.43■■□□□ 1.02
PKM-208ENST00000563275 DISP1Q96F81 1524 aa21.43■■□□□ 1.02
PKM-208ENST00000563275 UGGT2Q9NYU1 1516 aa21.43■■□□□ 1.02
PKM-208ENST00000563275 MAPKBP1O60336 1514 aa21.42■■□□□ 1.02
PKM-208ENST00000563275 PTPRGP23470 1445 aa21.42■■□□□ 1.02
PKM-208ENST00000563275 TNIKQ9UKE5 1360 aa21.41■■□□□ 1.02
PKM-208ENST00000563275 KIF13AQ9H1H9 1805 aa21.34■■□□□ 1.01
PKM-208ENST00000563275 ABCC10Q5T3U5 1492 aa21.34■■□□□ 1.01
PKM-208ENST00000563275 UHRF1BP1LA0JNW5 1464 aa21.33■■□□□ 1.01
PKM-208ENST00000563275 KIAA0556O60303 1618 aa21.32■■□□□ 1
PKM-208ENST00000563275 NPM1P06748 294 aaKnown RBP eCLIP21.31■■□□□ 1
PKM-208ENST00000563275 ABCC2Q92887 1545 aa21.3■■□□□ 1
PKM-208ENST00000563275 CTTNBP2Q8WZ74 1663 aa21.3■■□□□ 1
PKM-208ENST00000563275 DIP2BQ9P265 1576 aa21.29■■□□□ 1
PKM-208ENST00000563275 UACAQ9BZF9 1416 aa21.28■■□□□ 1
PKM-208ENST00000563275 EEA1Q15075 1411 aa21.27■■□□□ 1
PKM-208ENST00000563275 CSRNP3Q8WYN3 585 aa21.26■□□□□ 0.99
PKM-208ENST00000563275 FAM69CQ0P6D2 419 aa21.23■□□□□ 0.99
PKM-208ENST00000563275 GOLGA3Q08378 1498 aa21.22■□□□□ 0.99
PKM-208ENST00000563275 KDM5BQ9UGL1 1544 aa21.22■□□□□ 0.99
PKM-208ENST00000563275 TTBK1Q5TCY1 1321 aaPredicted RBP21.21■□□□□ 0.99
PKM-208ENST00000563275 ASXL2Q76L83 1435 aa21.18■□□□□ 0.98
PKM-208ENST00000563275 PLB1Q6P1J6 1458 aa21.17■□□□□ 0.98
PKM-208ENST00000563275 ABCA8O94911 1581 aa21.14■□□□□ 0.97
PKM-208ENST00000563275 GLI2P10070 1586 aa21.14■□□□□ 0.97
PKM-208ENST00000563275 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
PKM-208ENST00000563275 ZCCHC11Q5TAX3 1644 aaKnown RBP21.11■□□□□ 0.97
PKM-208ENST00000563275 SAMD9Q5K651 1589 aa21.1■□□□□ 0.97
PKM-208ENST00000563275 EPRSP07814 1512 aaKnown RBP21.08■□□□□ 0.96
PKM-208ENST00000563275 KIF21BO75037 1637 aa21.07■□□□□ 0.96
PKM-208ENST00000563275 PPRC1Q5VV67 1664 aaKnown RBP21.03■□□□□ 0.96
PKM-208ENST00000563275 WDR7Q9Y4E6 1490 aa21.03■□□□□ 0.96
PKM-208ENST00000563275 FAM9AQ8IZU1 332 aaPredicted RBP21.02■□□□□ 0.96
PKM-208ENST00000563275 MAP3K4Q9Y6R4 1608 aa21■□□□□ 0.95
PKM-208ENST00000563275 TSPOAP1O95153 1857 aa20.99■□□□□ 0.95
PKM-208ENST00000563275 KDM6BO15054 1643 aa20.97■□□□□ 0.95
PKM-208ENST00000563275 P3H3Q8IVL6 736 aa20.97■□□□□ 0.95
PKM-208ENST00000563275 ATP10BO94823 1461 aa20.94■□□□□ 0.94
PKM-208ENST00000563275 EFCAB5A4FU69 1503 aa20.92■□□□□ 0.94
PKM-208ENST00000563275 FHOD3Q2V2M9 1422 aa20.91■□□□□ 0.94
PKM-208ENST00000563275 RAPGEF6Q8TEU7 1601 aa20.9■□□□□ 0.94
PKM-208ENST00000563275 TEX14Q8IWB6 1497 aa20.89■□□□□ 0.94
PKM-208ENST00000563275 COL17A1Q9UMD9 1497 aaPredicted RBP20.89■□□□□ 0.94
PKM-208ENST00000563275 NUP153P49790 1475 aaKnown RBP20.88■□□□□ 0.93
PKM-208ENST00000563275 MAGI3Q5TCQ9 1506 aa20.88■□□□□ 0.93
PKM-208ENST00000563275 CFAP43Q8NDM7 1665 aa20.85■□□□□ 0.93
PKM-208ENST00000563275 CD109Q6YHK3 1445 aa20.84■□□□□ 0.93
PKM-208ENST00000563275 ARID3CA6NKF2 412 aa20.81■□□□□ 0.92
PKM-208ENST00000563275 RANGAP1P46060 587 aaPredicted RBP20.81■□□□□ 0.92
PKM-208ENST00000563275 KCNH8Q96L42 1107 aa20.81■□□□□ 0.92
PKM-208ENST00000563275 ABCA9Q8IUA7 1624 aa20.78■□□□□ 0.92
PKM-208ENST00000563275 ARHGAP35Q9NRY4 1499 aa20.78■□□□□ 0.92
PKM-208ENST00000563275 UBTFP17480 764 aaKnown RBP20.78■□□□□ 0.92
PKM-208ENST00000563275 AEBP2Q6ZN18 517 aaPredicted RBP20.74■□□□□ 0.91
PKM-208ENST00000563275 FMN1Q68DA7 1419 aa20.71■□□□□ 0.91
PKM-208ENST00000563275 EHMT2Q96KQ7 1210 aa20.71■□□□□ 0.91
PKM-208ENST00000563275 ARAP3Q8WWN8 1544 aa20.71■□□□□ 0.91
PKM-208ENST00000563275 KDM4FA0A1W2PPD8 638 aa20.7■□□□□ 0.9
PKM-208ENST00000563275 PHLDB1Q86UU1 1377 aa20.68■□□□□ 0.9
PKM-208ENST00000563275 PLEKHD1A6NEE1 506 aa20.66■□□□□ 0.9
PKM-208ENST00000563275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.66■□□□□ 0.9
PKM-208ENST00000563275 HNRNPUL2Q1KMD3 747 aaKnown RBP20.66■□□□□ 0.9
PKM-208ENST00000563275 CDK13Q14004 1512 aaKnown RBP20.65■□□□□ 0.9
PKM-208ENST00000563275 NEO1Q92859 1461 aa20.65■□□□□ 0.9
PKM-208ENST00000563275 HECW1Q76N89 1606 aa20.63■□□□□ 0.89
PKM-208ENST00000563275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.62■□□□□ 0.89
PKM-208ENST00000563275 ADGRL1O94910 1474 aa20.58■□□□□ 0.89
PKM-208ENST00000563275 TTC37Q6PGP7 1564 aa20.58■□□□□ 0.88
PKM-208ENST00000563275 FRMPD1Q5SYB0 1578 aa20.55■□□□□ 0.88
PKM-208ENST00000563275 CASKIN1Q8WXD9 1431 aa20.54■□□□□ 0.88
PKM-208ENST00000563275 FANCAO15360 1455 aa20.53■□□□□ 0.88
PKM-208ENST00000563275 LRRIQ1Q96JM4 1722 aa20.52■□□□□ 0.88
PKM-208ENST00000563275 RAPGEF3O95398 923 aa20.51■□□□□ 0.87
PKM-208ENST00000563275 PLCH2O75038 1416 aa20.51■□□□□ 0.87
PKM-208ENST00000563275 CLIP1P30622 1438 aa20.51■□□□□ 0.87
PKM-208ENST00000563275 TROQ12816 1431 aaPredicted RBP20.51■□□□□ 0.87
PKM-208ENST00000563275 AKNAQ7Z591 1439 aa20.51■□□□□ 0.87
PKM-208ENST00000563275 PCF11O94913 1555 aaKnown RBP20.51■□□□□ 0.87
PKM-208ENST00000563275 CDK11AQ9UQ88 783 aaPredicted RBP20.49■□□□□ 0.87
PKM-208ENST00000563275 CFAP74Q9C0B2 1584 aa20.49■□□□□ 0.87
PKM-208ENST00000563275 ATP1B4Q9UN42 357 aaPredicted RBP20.47■□□□□ 0.87
PKM-208ENST00000563275 DENND4BO75064 1496 aaPredicted RBP20.47■□□□□ 0.87
PKM-208ENST00000563275 CCDC18Q5T9S5 1454 aa20.47■□□□□ 0.87
PKM-208ENST00000563275 FYCO1Q9BQS8 1478 aa20.47■□□□□ 0.87
PKM-208ENST00000563275 KIF14Q15058 1648 aa20.46■□□□□ 0.87
PKM-208ENST00000563275 RICTORQ6R327 1708 aa20.46■□□□□ 0.87
PKM-208ENST00000563275 ZMYM4Q5VZL5 1548 aa20.43■□□□□ 0.86
PKM-208ENST00000563275 ARHGEF40Q8TER5 1519 aa20.41■□□□□ 0.86
PKM-208ENST00000563275 MYO5CQ9NQX4 1742 aa20.4■□□□□ 0.86
PKM-208ENST00000563275 POGZQ7Z3K3 1410 aa20.39■□□□□ 0.85
PKM-208ENST00000563275 SCAPERQ9BY12 1400 aa20.37■□□□□ 0.85
PKM-208ENST00000563275 MAGI2Q86UL8 1455 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms