RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 IGF1RP08069 1367 aa27.33■■□□□ 1.97
SF3B3-203ENST00000562874 KIF13AQ9H1H9 1805 aa27.23■■□□□ 1.95
SF3B3-203ENST00000562874 JPH4Q96JJ6 628 aa27.22■■□□□ 1.95
SF3B3-203ENST00000562874 KIAA0586Q9BVV6 1533 aa27.21■■□□□ 1.95
SF3B3-203ENST00000562874 CARMIL1Q5VZK9 1371 aa27.19■■□□□ 1.94
SF3B3-203ENST00000562874 ADCY10Q96PN6 1610 aa27.16■■□□□ 1.94
SF3B3-203ENST00000562874 IQGAP2Q13576 1575 aa27.14■■□□□ 1.94
SF3B3-203ENST00000562874 CTTNBP2Q8WZ74 1663 aa27.11■■□□□ 1.93
SF3B3-203ENST00000562874 RAPGEF2Q9Y4G8 1499 aa27.03■■□□□ 1.92
SF3B3-203ENST00000562874 MAPKBP1O60336 1514 aa26.97■■□□□ 1.91
SF3B3-203ENST00000562874 DIP2BQ9P265 1576 aa26.96■■□□□ 1.91
SF3B3-203ENST00000562874 TSPOAP1O95153 1857 aa26.93■■□□□ 1.9
SF3B3-203ENST00000562874 TTBK1Q5TCY1 1321 aaPredicted RBP26.93■■□□□ 1.9
SF3B3-203ENST00000562874 KIAA0556O60303 1618 aa26.93■■□□□ 1.9
SF3B3-203ENST00000562874 DISP1Q96F81 1524 aa26.92■■□□□ 1.9
SF3B3-203ENST00000562874 CARMIL2Q6F5E8 1435 aa26.91■■□□□ 1.9
SF3B3-203ENST00000562874 UGGT2Q9NYU1 1516 aa26.9■■□□□ 1.9
SF3B3-203ENST00000562874 PTPRGP23470 1445 aa26.88■■□□□ 1.89
SF3B3-203ENST00000562874 TNIKQ9UKE5 1360 aa26.86■■□□□ 1.89
SF3B3-203ENST00000562874 ABCC10Q5T3U5 1492 aa26.86■■□□□ 1.89
SF3B3-203ENST00000562874 NPM1P06748 294 aaKnown RBP eCLIP26.83■■□□□ 1.89
SF3B3-203ENST00000562874 PRXQ9BXM0 1461 aa26.81■■□□□ 1.88
SF3B3-203ENST00000562874 ABCC2Q92887 1545 aa26.79■■□□□ 1.88
SF3B3-203ENST00000562874 ZCCHC11Q5TAX3 1644 aaKnown RBP26.77■■□□□ 1.88
SF3B3-203ENST00000562874 FAM69CQ0P6D2 419 aa26.75■■□□□ 1.87
SF3B3-203ENST00000562874 UHRF1BP1LA0JNW5 1464 aa26.73■■□□□ 1.87
SF3B3-203ENST00000562874 UACAQ9BZF9 1416 aa26.72■■□□□ 1.87
SF3B3-203ENST00000562874 PPRC1Q5VV67 1664 aaKnown RBP26.7■■□□□ 1.86
SF3B3-203ENST00000562874 ASXL2Q76L83 1435 aa26.66■■□□□ 1.86
SF3B3-203ENST00000562874 KDM6BO15054 1643 aa26.66■■□□□ 1.86
SF3B3-203ENST00000562874 GOLGA3Q08378 1498 aa26.65■■□□□ 1.86
SF3B3-203ENST00000562874 KDM5BQ9UGL1 1544 aa26.64■■□□□ 1.85
SF3B3-203ENST00000562874 PLB1Q6P1J6 1458 aa26.62■■□□□ 1.85
SF3B3-203ENST00000562874 ABCA8O94911 1581 aa26.61■■□□□ 1.85
SF3B3-203ENST00000562874 GLI2P10070 1586 aa26.6■■□□□ 1.85
SF3B3-203ENST00000562874 MAP3K4Q9Y6R4 1608 aa26.58■■□□□ 1.85
SF3B3-203ENST00000562874 SAMD9Q5K651 1589 aa26.58■■□□□ 1.85
SF3B3-203ENST00000562874 CSRNP3Q8WYN3 585 aa26.54■■□□□ 1.84
SF3B3-203ENST00000562874 EEA1Q15075 1411 aa26.54■■□□□ 1.84
SF3B3-203ENST00000562874 EPRSP07814 1512 aaKnown RBP26.52■■□□□ 1.84
SF3B3-203ENST00000562874 KIF21BO75037 1637 aa26.51■■□□□ 1.83
SF3B3-203ENST00000562874 FAM9AQ8IZU1 332 aaPredicted RBP26.48■■□□□ 1.83
SF3B3-203ENST00000562874 WDR7Q9Y4E6 1490 aa26.47■■□□□ 1.83
SF3B3-203ENST00000562874 P3H3Q8IVL6 736 aa26.44■■□□□ 1.82
SF3B3-203ENST00000562874 CFAP43Q8NDM7 1665 aa26.44■■□□□ 1.82
SF3B3-203ENST00000562874 RAPGEF6Q8TEU7 1601 aa26.43■■□□□ 1.82
SF3B3-203ENST00000562874 AEBP2Q6ZN18 517 aaPredicted RBP26.38■■□□□ 1.81
SF3B3-203ENST00000562874 RANGAP1P46060 587 aaPredicted RBP26.36■■□□□ 1.81
SF3B3-203ENST00000562874 ARID3CA6NKF2 412 aa26.34■■□□□ 1.81
SF3B3-203ENST00000562874 TEX14Q8IWB6 1497 aa26.33■■□□□ 1.81
SF3B3-203ENST00000562874 FHOD3Q2V2M9 1422 aa26.32■■□□□ 1.8
SF3B3-203ENST00000562874 CHIC1Q5VXU3 224 aa26.31■■□□□ 1.8
SF3B3-203ENST00000562874 ATP10BO94823 1461 aa26.29■■□□□ 1.8
SF3B3-203ENST00000562874 EFCAB5A4FU69 1503 aa26.29■■□□□ 1.8
SF3B3-203ENST00000562874 COL17A1Q9UMD9 1497 aaPredicted RBP26.28■■□□□ 1.8
SF3B3-203ENST00000562874 EHMT2Q96KQ7 1210 aa26.27■■□□□ 1.8
SF3B3-203ENST00000562874 KCNH8Q96L42 1107 aa26.24■■□□□ 1.79
SF3B3-203ENST00000562874 ABCA9Q8IUA7 1624 aa26.24■■□□□ 1.79
SF3B3-203ENST00000562874 NUP153P49790 1475 aaKnown RBP26.23■■□□□ 1.79
SF3B3-203ENST00000562874 CD109Q6YHK3 1445 aa26.22■■□□□ 1.79
SF3B3-203ENST00000562874 MAGI3Q5TCQ9 1506 aa26.21■■□□□ 1.79
SF3B3-203ENST00000562874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.1■■□□□ 1.77
SF3B3-203ENST00000562874 HNRNPUL2Q1KMD3 747 aaKnown RBP26.1■■□□□ 1.77
SF3B3-203ENST00000562874 LRRIQ1Q96JM4 1722 aa26.1■■□□□ 1.77
SF3B3-203ENST00000562874 CDK13Q14004 1512 aaKnown RBP26.09■■□□□ 1.77
SF3B3-203ENST00000562874 UBTFP17480 764 aaKnown RBP26.09■■□□□ 1.77
SF3B3-203ENST00000562874 ADGRL1O94910 1474 aa26.07■■□□□ 1.76
SF3B3-203ENST00000562874 ARHGAP35Q9NRY4 1499 aa26.07■■□□□ 1.76
SF3B3-203ENST00000562874 KDM4FA0A1W2PPD8 638 aa26.07■■□□□ 1.76
SF3B3-203ENST00000562874 HECW1Q76N89 1606 aa26.06■■□□□ 1.76
SF3B3-203ENST00000562874 TTC37Q6PGP7 1564 aa26.05■■□□□ 1.76
SF3B3-203ENST00000562874 FRMPD1Q5SYB0 1578 aa25.99■■□□□ 1.75
SF3B3-203ENST00000562874 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.99■■□□□ 1.75
SF3B3-203ENST00000562874 ARAP3Q8WWN8 1544 aa25.98■■□□□ 1.75
SF3B3-203ENST00000562874 CFAP74Q9C0B2 1584 aa25.96■■□□□ 1.75
SF3B3-203ENST00000562874 RICTORQ6R327 1708 aa25.95■■□□□ 1.74
SF3B3-203ENST00000562874 MYO5CQ9NQX4 1742 aa25.94■■□□□ 1.74
SF3B3-203ENST00000562874 FMN1Q68DA7 1419 aa25.94■■□□□ 1.74
SF3B3-203ENST00000562874 PCF11O94913 1555 aaKnown RBP25.94■■□□□ 1.74
SF3B3-203ENST00000562874 NEO1Q92859 1461 aa25.93■■□□□ 1.74
SF3B3-203ENST00000562874 KIF14Q15058 1648 aa25.92■■□□□ 1.74
SF3B3-203ENST00000562874 PLEKHD1A6NEE1 506 aa25.88■■□□□ 1.73
SF3B3-203ENST00000562874 ATP1B4Q9UN42 357 aaPredicted RBP25.87■■□□□ 1.73
SF3B3-203ENST00000562874 FANCAO15360 1455 aa25.85■■□□□ 1.73
SF3B3-203ENST00000562874 PHLDB1Q86UU1 1377 aa25.82■■□□□ 1.72
SF3B3-203ENST00000562874 ARHGEF40Q8TER5 1519 aa25.82■■□□□ 1.72
SF3B3-203ENST00000562874 RAPGEF3O95398 923 aa25.81■■□□□ 1.72
SF3B3-203ENST00000562874 AKNAQ7Z591 1439 aa25.78■■□□□ 1.72
SF3B3-203ENST00000562874 BCORL1Q5H9F3 1711 aa25.77■■□□□ 1.72
SF3B3-203ENST00000562874 SIGLEC1Q9BZZ2 1709 aa25.76■■□□□ 1.71
SF3B3-203ENST00000562874 CDC42BPBQ9Y5S2 1711 aa25.76■■□□□ 1.71
SF3B3-203ENST00000562874 ADAMTSL3P82987 1691 aa25.75■■□□□ 1.71
SF3B3-203ENST00000562874 DENND4BO75064 1496 aaPredicted RBP25.75■■□□□ 1.71
SF3B3-203ENST00000562874 ZMYM4Q5VZL5 1548 aa25.73■■□□□ 1.71
SF3B3-203ENST00000562874 TROQ12816 1431 aaPredicted RBP25.72■■□□□ 1.71
SF3B3-203ENST00000562874 CDC42BPAQ5VT25 1732 aa25.71■■□□□ 1.71
SF3B3-203ENST00000562874 CASKIN1Q8WXD9 1431 aa25.71■■□□□ 1.71
SF3B3-203ENST00000562874 PREX2Q70Z35 1606 aa25.7■■□□□ 1.71
SF3B3-203ENST00000562874 MADDQ8WXG6 1647 aa25.7■■□□□ 1.71
SF3B3-203ENST00000562874 HECW2Q9P2P5 1572 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms