RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 CUL7Q14999 1698 aa29.07■■■□□ 2.24
TNRC6A-209ENST00000562829 JPH4Q96JJ6 628 aa29.06■■■□□ 2.24
TNRC6A-209ENST00000562829 KIAA0586Q9BVV6 1533 aa28.93■■■□□ 2.22
TNRC6A-209ENST00000562829 CARMIL1Q5VZK9 1371 aa28.92■■■□□ 2.22
TNRC6A-209ENST00000562829 NPM1P06748 294 aaKnown RBP eCLIP28.74■■■□□ 2.19
TNRC6A-209ENST00000562829 IQGAP2Q13576 1575 aa28.72■■■□□ 2.19
TNRC6A-209ENST00000562829 ADCY10Q96PN6 1610 aa28.71■■■□□ 2.19
TNRC6A-209ENST00000562829 RAPGEF2Q9Y4G8 1499 aa28.7■■■□□ 2.18
TNRC6A-209ENST00000562829 TTBK1Q5TCY1 1321 aaPredicted RBP28.69■■■□□ 2.18
TNRC6A-209ENST00000562829 CARMIL2Q6F5E8 1435 aa28.69■■■□□ 2.18
TNRC6A-209ENST00000562829 KIF13AQ9H1H9 1805 aa28.68■■■□□ 2.18
TNRC6A-209ENST00000562829 PTPRGP23470 1445 aa28.65■■■□□ 2.18
TNRC6A-209ENST00000562829 MAPKBP1O60336 1514 aa28.63■■■□□ 2.17
TNRC6A-209ENST00000562829 TNIKQ9UKE5 1360 aa28.62■■■□□ 2.17
TNRC6A-209ENST00000562829 ABCC10Q5T3U5 1492 aa28.58■■■□□ 2.17
TNRC6A-209ENST00000562829 FAM69CQ0P6D2 419 aa28.57■■■□□ 2.16
TNRC6A-209ENST00000562829 DIP2BQ9P265 1576 aa28.53■■■□□ 2.16
TNRC6A-209ENST00000562829 DISP1Q96F81 1524 aa28.53■■■□□ 2.16
TNRC6A-209ENST00000562829 UGGT2Q9NYU1 1516 aa28.51■■■□□ 2.15
TNRC6A-209ENST00000562829 CTTNBP2Q8WZ74 1663 aa28.48■■■□□ 2.15
TNRC6A-209ENST00000562829 ABCC2Q92887 1545 aa28.47■■■□□ 2.15
TNRC6A-209ENST00000562829 KIAA0556O60303 1618 aa28.46■■■□□ 2.15
TNRC6A-209ENST00000562829 UACAQ9BZF9 1416 aa28.43■■■□□ 2.14
TNRC6A-209ENST00000562829 PRXQ9BXM0 1461 aa28.41■■■□□ 2.14
TNRC6A-209ENST00000562829 UHRF1BP1LA0JNW5 1464 aa28.4■■■□□ 2.14
TNRC6A-209ENST00000562829 TSPOAP1O95153 1857 aa28.38■■■□□ 2.13
TNRC6A-209ENST00000562829 ASXL2Q76L83 1435 aa28.35■■■□□ 2.13
TNRC6A-209ENST00000562829 GOLGA3Q08378 1498 aa28.34■■■□□ 2.13
TNRC6A-209ENST00000562829 PLB1Q6P1J6 1458 aa28.34■■■□□ 2.13
TNRC6A-209ENST00000562829 AEBP2Q6ZN18 517 aaPredicted RBP28.33■■■□□ 2.13
TNRC6A-209ENST00000562829 KDM5BQ9UGL1 1544 aa28.28■■■□□ 2.12
TNRC6A-209ENST00000562829 CSRNP3Q8WYN3 585 aa28.27■■■□□ 2.12
TNRC6A-209ENST00000562829 ZCCHC11Q5TAX3 1644 aaKnown RBP28.27■■■□□ 2.12
TNRC6A-209ENST00000562829 KDM6BO15054 1643 aa28.26■■■□□ 2.11
TNRC6A-209ENST00000562829 GLI2P10070 1586 aa28.22■■■□□ 2.11
TNRC6A-209ENST00000562829 EEA1Q15075 1411 aa28.19■■■□□ 2.1
TNRC6A-209ENST00000562829 EPRSP07814 1512 aaKnown RBP28.18■■■□□ 2.1
TNRC6A-209ENST00000562829 ABCA8O94911 1581 aa28.16■■■□□ 2.1
TNRC6A-209ENST00000562829 PPRC1Q5VV67 1664 aaKnown RBP28.13■■■□□ 2.09
TNRC6A-209ENST00000562829 P3H3Q8IVL6 736 aa28.13■■■□□ 2.09
TNRC6A-209ENST00000562829 FAM9AQ8IZU1 332 aaPredicted RBP28.13■■■□□ 2.09
TNRC6A-209ENST00000562829 WDR7Q9Y4E6 1490 aa28.12■■■□□ 2.09
TNRC6A-209ENST00000562829 MAP3K4Q9Y6R4 1608 aa28.09■■■□□ 2.09
TNRC6A-209ENST00000562829 SAMD9Q5K651 1589 aa28.04■■■□□ 2.08
TNRC6A-209ENST00000562829 TEX14Q8IWB6 1497 aa28.03■■■□□ 2.08
TNRC6A-209ENST00000562829 RANGAP1P46060 587 aaPredicted RBP28.03■■■□□ 2.08
TNRC6A-209ENST00000562829 ARID3CA6NKF2 412 aa28.01■■■□□ 2.07
TNRC6A-209ENST00000562829 KCNH8Q96L42 1107 aa28■■■□□ 2.07
TNRC6A-209ENST00000562829 KIF21BO75037 1637 aa27.96■■■□□ 2.07
TNRC6A-209ENST00000562829 CFAP43Q8NDM7 1665 aa27.94■■■□□ 2.06
TNRC6A-209ENST00000562829 RAPGEF6Q8TEU7 1601 aa27.93■■■□□ 2.06
TNRC6A-209ENST00000562829 CD109Q6YHK3 1445 aa27.92■■■□□ 2.06
TNRC6A-209ENST00000562829 ATP10BO94823 1461 aa27.92■■■□□ 2.06
TNRC6A-209ENST00000562829 CHIC1Q5VXU3 224 aa27.92■■■□□ 2.06
TNRC6A-209ENST00000562829 COL17A1Q9UMD9 1497 aaPredicted RBP27.91■■■□□ 2.06
TNRC6A-209ENST00000562829 FHOD3Q2V2M9 1422 aa27.9■■■□□ 2.06
TNRC6A-209ENST00000562829 EHMT2Q96KQ7 1210 aa27.87■■■□□ 2.05
TNRC6A-209ENST00000562829 MAGI3Q5TCQ9 1506 aa27.87■■■□□ 2.05
TNRC6A-209ENST00000562829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.86■■■□□ 2.05
TNRC6A-209ENST00000562829 HNRNPUL2Q1KMD3 747 aaKnown RBP27.86■■■□□ 2.05
TNRC6A-209ENST00000562829 KDM4FA0A1W2PPD8 638 aa27.83■■■□□ 2.05
TNRC6A-209ENST00000562829 EFCAB5A4FU69 1503 aa27.82■■■□□ 2.04
TNRC6A-209ENST00000562829 NUP153P49790 1475 aaKnown RBP27.79■■■□□ 2.04
TNRC6A-209ENST00000562829 UBTFP17480 764 aaKnown RBP27.79■■■□□ 2.04
TNRC6A-209ENST00000562829 ABCA9Q8IUA7 1624 aa27.75■■■□□ 2.03
TNRC6A-209ENST00000562829 ADGRL1O94910 1474 aa27.7■■■□□ 2.03
TNRC6A-209ENST00000562829 PLEKHD1A6NEE1 506 aa27.65■■■□□ 2.02
TNRC6A-209ENST00000562829 ARAP3Q8WWN8 1544 aa27.63■■■□□ 2.01
TNRC6A-209ENST00000562829 PHLDB1Q86UU1 1377 aa27.6■■■□□ 2.01
TNRC6A-209ENST00000562829 ARHGAP35Q9NRY4 1499 aa27.59■■■□□ 2.01
TNRC6A-209ENST00000562829 ATP1B4Q9UN42 357 aaPredicted RBP27.59■■■□□ 2.01
TNRC6A-209ENST00000562829 NEO1Q92859 1461 aa27.58■■■□□ 2.01
TNRC6A-209ENST00000562829 CDK13Q14004 1512 aaKnown RBP27.58■■■□□ 2.01
TNRC6A-209ENST00000562829 FMN1Q68DA7 1419 aa27.58■■■□□ 2
TNRC6A-209ENST00000562829 HECW1Q76N89 1606 aa27.54■■■□□ 2
TNRC6A-209ENST00000562829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.51■■■□□ 2
TNRC6A-209ENST00000562829 RAPGEF3O95398 923 aa27.51■■□□□ 1.99
TNRC6A-209ENST00000562829 TTC37Q6PGP7 1564 aa27.49■■□□□ 1.99
TNRC6A-209ENST00000562829 CFAP74Q9C0B2 1584 aa27.46■■□□□ 1.99
TNRC6A-209ENST00000562829 FANCAO15360 1455 aa27.45■■□□□ 1.99
TNRC6A-209ENST00000562829 FRMPD1Q5SYB0 1578 aa27.44■■□□□ 1.98
TNRC6A-209ENST00000562829 AKNAQ7Z591 1439 aa27.42■■□□□ 1.98
TNRC6A-209ENST00000562829 DENND4BO75064 1496 aaPredicted RBP27.41■■□□□ 1.98
TNRC6A-209ENST00000562829 CDK11AQ9UQ88 783 aaPredicted RBP27.41■■□□□ 1.98
TNRC6A-209ENST00000562829 RICTORQ6R327 1708 aa27.36■■□□□ 1.97
TNRC6A-209ENST00000562829 KIF14Q15058 1648 aa27.34■■□□□ 1.97
TNRC6A-209ENST00000562829 LRRIQ1Q96JM4 1722 aa27.33■■□□□ 1.97
TNRC6A-209ENST00000562829 MYO5CQ9NQX4 1742 aa27.33■■□□□ 1.96
TNRC6A-209ENST00000562829 PLCH2O75038 1416 aa27.33■■□□□ 1.96
TNRC6A-209ENST00000562829 PCF11O94913 1555 aaKnown RBP27.32■■□□□ 1.96
TNRC6A-209ENST00000562829 ARID4BQ4LE39 1312 aaPredicted RBP27.32■■□□□ 1.96
TNRC6A-209ENST00000562829 CLIP1P30622 1438 aa27.32■■□□□ 1.96
TNRC6A-209ENST00000562829 TROQ12816 1431 aaPredicted RBP27.32■■□□□ 1.96
TNRC6A-209ENST00000562829 ARHGEF40Q8TER5 1519 aa27.31■■□□□ 1.96
TNRC6A-209ENST00000562829 CASKIN1Q8WXD9 1431 aa27.28■■□□□ 1.96
TNRC6A-209ENST00000562829 HECW2Q9P2P5 1572 aa27.26■■□□□ 1.96
TNRC6A-209ENST00000562829 CCDC18Q5T9S5 1454 aa27.26■■□□□ 1.95
TNRC6A-209ENST00000562829 SCAPERQ9BY12 1400 aa27.26■■□□□ 1.95
TNRC6A-209ENST00000562829 ZMYM4Q5VZL5 1548 aa27.26■■□□□ 1.95
TNRC6A-209ENST00000562829 ADAMTSL3P82987 1691 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms