RNA–Protein interactions for RNA: ENST00000562261.1

KLHDC4-208, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-208ENST00000562261 CUL7Q14999 1698 aa26.38■■□□□ 1.81
KLHDC4-208ENST00000562261 PRG4Q92954 1404 aaPredicted RBP26.34■■□□□ 1.81
KLHDC4-208ENST00000562261 JPH4Q96JJ6 628 aa26.34■■□□□ 1.81
KLHDC4-208ENST00000562261 KIAA0586Q9BVV6 1533 aa26.25■■□□□ 1.79
KLHDC4-208ENST00000562261 CARMIL1Q5VZK9 1371 aa26.23■■□□□ 1.79
KLHDC4-208ENST00000562261 IQGAP2Q13576 1575 aa26.04■■□□□ 1.76
KLHDC4-208ENST00000562261 ADCY10Q96PN6 1610 aa26.04■■□□□ 1.76
KLHDC4-208ENST00000562261 RAPGEF2Q9Y4G8 1499 aa26.02■■□□□ 1.76
KLHDC4-208ENST00000562261 KIF13AQ9H1H9 1805 aa26.01■■□□□ 1.75
KLHDC4-208ENST00000562261 NPM1P06748 294 aaKnown RBP eCLIP25.99■■□□□ 1.75
KLHDC4-208ENST00000562261 MAPKBP1O60336 1514 aa25.98■■□□□ 1.75
KLHDC4-208ENST00000562261 CARMIL2Q6F5E8 1435 aa25.97■■□□□ 1.75
KLHDC4-208ENST00000562261 PTPRGP23470 1445 aa25.96■■□□□ 1.75
KLHDC4-208ENST00000562261 TNIKQ9UKE5 1360 aa25.94■■□□□ 1.74
KLHDC4-208ENST00000562261 ABCC10Q5T3U5 1492 aa25.91■■□□□ 1.74
KLHDC4-208ENST00000562261 DISP1Q96F81 1524 aa25.89■■□□□ 1.74
KLHDC4-208ENST00000562261 UGGT2Q9NYU1 1516 aa25.88■■□□□ 1.73
KLHDC4-208ENST00000562261 FAM69CQ0P6D2 419 aa25.88■■□□□ 1.73
KLHDC4-208ENST00000562261 TTBK1Q5TCY1 1321 aaPredicted RBP25.88■■□□□ 1.73
KLHDC4-208ENST00000562261 DIP2BQ9P265 1576 aa25.87■■□□□ 1.73
KLHDC4-208ENST00000562261 ILDR1Q86SU0 546 aaPredicted RBP25.84■■□□□ 1.73
KLHDC4-208ENST00000562261 CTTNBP2Q8WZ74 1663 aa25.83■■□□□ 1.73
KLHDC4-208ENST00000562261 KDM4FA0A1W2PPD8 638 aa25.82■■□□□ 1.72
KLHDC4-208ENST00000562261 ABCC2Q92887 1545 aa25.81■■□□□ 1.72
KLHDC4-208ENST00000562261 KIAA0556O60303 1618 aa25.81■■□□□ 1.72
KLHDC4-208ENST00000562261 PRXQ9BXM0 1461 aa25.8■■□□□ 1.72
KLHDC4-208ENST00000562261 UHRF1BP1LA0JNW5 1464 aa25.79■■□□□ 1.72
KLHDC4-208ENST00000562261 UACAQ9BZF9 1416 aa25.78■■□□□ 1.72
KLHDC4-208ENST00000562261 ASXL2Q76L83 1435 aa25.7■■□□□ 1.7
KLHDC4-208ENST00000562261 GOLGA3Q08378 1498 aa25.68■■□□□ 1.7
KLHDC4-208ENST00000562261 PLB1Q6P1J6 1458 aa25.68■■□□□ 1.7
KLHDC4-208ENST00000562261 KDM6BO15054 1643 aa25.68■■□□□ 1.7
KLHDC4-208ENST00000562261 KDM5BQ9UGL1 1544 aa25.68■■□□□ 1.7
KLHDC4-208ENST00000562261 TSPOAP1O95153 1857 aa25.67■■□□□ 1.7
KLHDC4-208ENST00000562261 ZCCHC11Q5TAX3 1644 aaKnown RBP25.63■■□□□ 1.69
KLHDC4-208ENST00000562261 GLI2P10070 1586 aa25.62■■□□□ 1.69
KLHDC4-208ENST00000562261 CSRNP3Q8WYN3 585 aa25.62■■□□□ 1.69
KLHDC4-208ENST00000562261 EEA1Q15075 1411 aa25.58■■□□□ 1.69
KLHDC4-208ENST00000562261 ABCA8O94911 1581 aa25.56■■□□□ 1.68
KLHDC4-208ENST00000562261 EPRSP07814 1512 aaKnown RBP25.55■■□□□ 1.68
KLHDC4-208ENST00000562261 PPRC1Q5VV67 1664 aaKnown RBP25.54■■□□□ 1.68
KLHDC4-208ENST00000562261 MAP3K4Q9Y6R4 1608 aa25.5■■□□□ 1.67
KLHDC4-208ENST00000562261 WDR7Q9Y4E6 1490 aa25.49■■□□□ 1.67
KLHDC4-208ENST00000562261 SAMD9Q5K651 1589 aa25.46■■□□□ 1.67
KLHDC4-208ENST00000562261 P3H3Q8IVL6 736 aa25.44■■□□□ 1.66
KLHDC4-208ENST00000562261 FAM9AQ8IZU1 332 aaPredicted RBP25.42■■□□□ 1.66
KLHDC4-208ENST00000562261 ADGRL1O94910 1474 aa25.4■■□□□ 1.66
KLHDC4-208ENST00000562261 TEX14Q8IWB6 1497 aa25.4■■□□□ 1.66
KLHDC4-208ENST00000562261 KIF21BO75037 1637 aa25.38■■□□□ 1.65
KLHDC4-208ENST00000562261 CFAP43Q8NDM7 1665 aa25.34■■□□□ 1.65
KLHDC4-208ENST00000562261 ATP10BO94823 1461 aa25.33■■□□□ 1.65
KLHDC4-208ENST00000562261 CHIC1Q5VXU3 224 aa25.32■■□□□ 1.64
KLHDC4-208ENST00000562261 KCNH8Q96L42 1107 aa25.32■■□□□ 1.64
KLHDC4-208ENST00000562261 RAPGEF6Q8TEU7 1601 aa25.32■■□□□ 1.64
KLHDC4-208ENST00000562261 COL17A1Q9UMD9 1497 aaPredicted RBP25.32■■□□□ 1.64
KLHDC4-208ENST00000562261 ARID3CA6NKF2 412 aa25.31■■□□□ 1.64
KLHDC4-208ENST00000562261 CD109Q6YHK3 1445 aa25.3■■□□□ 1.64
KLHDC4-208ENST00000562261 RANGAP1P46060 587 aaPredicted RBP25.3■■□□□ 1.64
KLHDC4-208ENST00000562261 MAGI3Q5TCQ9 1506 aa25.28■■□□□ 1.64
KLHDC4-208ENST00000562261 HECW2Q9P2P5 1572 aa25.28■■□□□ 1.64
KLHDC4-208ENST00000562261 FHOD3Q2V2M9 1422 aa25.28■■□□□ 1.64
KLHDC4-208ENST00000562261 EFCAB5A4FU69 1503 aa25.25■■□□□ 1.63
KLHDC4-208ENST00000562261 NUP153P49790 1475 aaKnown RBP25.21■■□□□ 1.63
KLHDC4-208ENST00000562261 ABCA9Q8IUA7 1624 aa25.18■■□□□ 1.62
KLHDC4-208ENST00000562261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.16■■□□□ 1.62
KLHDC4-208ENST00000562261 HNRNPUL2Q1KMD3 747 aaKnown RBP25.16■■□□□ 1.62
KLHDC4-208ENST00000562261 UBTFP17480 764 aaKnown RBP25.14■■□□□ 1.62
KLHDC4-208ENST00000562261 EHMT2Q96KQ7 1210 aa25.14■■□□□ 1.62
KLHDC4-208ENST00000562261 ARAP3Q8WWN8 1544 aa25.08■■□□□ 1.61
KLHDC4-208ENST00000562261 PHLDB1Q86UU1 1377 aa25.05■■□□□ 1.6
KLHDC4-208ENST00000562261 PLEKHD1A6NEE1 506 aa25.04■■□□□ 1.6
KLHDC4-208ENST00000562261 ARHGAP35Q9NRY4 1499 aa25.03■■□□□ 1.6
KLHDC4-208ENST00000562261 FBXO41Q8TF61 875 aa25.02■■□□□ 1.6
KLHDC4-208ENST00000562261 NEO1Q92859 1461 aa25.02■■□□□ 1.6
KLHDC4-208ENST00000562261 FMN1Q68DA7 1419 aa25.01■■□□□ 1.59
KLHDC4-208ENST00000562261 CDK13Q14004 1512 aaKnown RBP24.99■■□□□ 1.59
KLHDC4-208ENST00000562261 HECW1Q76N89 1606 aa24.96■■□□□ 1.59
KLHDC4-208ENST00000562261 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.96■■□□□ 1.594e-6■■■■□ 21.7
KLHDC4-208ENST00000562261 TTC37Q6PGP7 1564 aa24.93■■□□□ 1.58
KLHDC4-208ENST00000562261 RAPGEF3O95398 923 aa24.91■■□□□ 1.58
KLHDC4-208ENST00000562261 FRMPD1Q5SYB0 1578 aa24.91■■□□□ 1.58
KLHDC4-208ENST00000562261 ATP1B4Q9UN42 357 aaPredicted RBP24.9■■□□□ 1.58
KLHDC4-208ENST00000562261 CFAP74Q9C0B2 1584 aa24.89■■□□□ 1.58
KLHDC4-208ENST00000562261 FANCAO15360 1455 aa24.88■■□□□ 1.57
KLHDC4-208ENST00000562261 AKNAQ7Z591 1439 aa24.86■■□□□ 1.57
KLHDC4-208ENST00000562261 DENND4BO75064 1496 aaPredicted RBP24.83■■□□□ 1.57
KLHDC4-208ENST00000562261 RICTORQ6R327 1708 aa24.82■■□□□ 1.56
KLHDC4-208ENST00000562261 LRRIQ1Q96JM4 1722 aa24.82■■□□□ 1.56
KLHDC4-208ENST00000562261 CDK11AQ9UQ88 783 aaPredicted RBP24.82■■□□□ 1.56
KLHDC4-208ENST00000562261 PLCH2O75038 1416 aa24.79■■□□□ 1.56
KLHDC4-208ENST00000562261 KIF14Q15058 1648 aa24.78■■□□□ 1.56
KLHDC4-208ENST00000562261 TROQ12816 1431 aaPredicted RBP24.78■■□□□ 1.56
KLHDC4-208ENST00000562261 PCF11O94913 1555 aaKnown RBP24.77■■□□□ 1.56
KLHDC4-208ENST00000562261 ARHGEF40Q8TER5 1519 aa24.76■■□□□ 1.55
KLHDC4-208ENST00000562261 MYO5CQ9NQX4 1742 aa24.76■■□□□ 1.55
KLHDC4-208ENST00000562261 CASKIN1Q8WXD9 1431 aa24.76■■□□□ 1.55
KLHDC4-208ENST00000562261 CLIP1P30622 1438 aa24.74■■□□□ 1.55
KLHDC4-208ENST00000562261 ZMYM4Q5VZL5 1548 aa24.74■■□□□ 1.55
KLHDC4-208ENST00000562261 ADAMTSL3P82987 1691 aa24.72■■□□□ 1.55
KLHDC4-208ENST00000562261 CCDC18Q5T9S5 1454 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms