RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 DMRT2Q9Y5R5 561 aa18.46■□□□□ 0.55
PCAT1-202ENST00000561978 FHAD1B1AJZ9 1412 aa18.45■□□□□ 0.54
PCAT1-202ENST00000561978 PCGF6Q9BYE7 350 aa18.43■□□□□ 0.54
PCAT1-202ENST00000561978 PPP4R3CPQ6ZMV5 832 aa18.42■□□□□ 0.54
PCAT1-202ENST00000561978 GRIN2AQ12879 1464 aa18.42■□□□□ 0.54
PCAT1-202ENST00000561978 CUL7Q14999 1698 aa18.39■□□□□ 0.53
PCAT1-202ENST00000561978 EEA1Q15075 1411 aa18.39■□□□□ 0.53
PCAT1-202ENST00000561978 CARMIL1Q5VZK9 1371 aa18.38■□□□□ 0.53
PCAT1-202ENST00000561978 TRIM26Q12899 539 aaPredicted RBP18.35■□□□□ 0.53
PCAT1-202ENST00000561978 CEP170Q5SW79 1584 aa18.33■□□□□ 0.53
PCAT1-202ENST00000561978 CSRNP3Q8WYN3 585 aa18.31■□□□□ 0.52
PCAT1-202ENST00000561978 NUP160Q12769 1436 aa18.3■□□□□ 0.52
PCAT1-202ENST00000561978 CLASP1Q7Z460 1538 aa18.3■□□□□ 0.52
PCAT1-202ENST00000561978 RAPGEF2Q9Y4G8 1499 aa18.28■□□□□ 0.52
PCAT1-202ENST00000561978 EHMT2Q96KQ7 1210 aa18.28■□□□□ 0.52
PCAT1-202ENST00000561978 HRCP23327 699 aa18.27■□□□□ 0.52
PCAT1-202ENST00000561978 PRXQ9BXM0 1461 aa18.25■□□□□ 0.51
PCAT1-202ENST00000561978 ARHGEF11O15085 1522 aa18.22■□□□□ 0.51
PCAT1-202ENST00000561978 RIMBP3CA6NJZ7 1639 aa18.19■□□□□ 0.5
PCAT1-202ENST00000561978 RIMBP3BA6NNM3 1639 aa18.19■□□□□ 0.5
PCAT1-202ENST00000561978 RIMBP3Q9UFD9 1639 aa18.19■□□□□ 0.5
PCAT1-202ENST00000561978 KIAA0586Q9BVV6 1533 aa18.17■□□□□ 0.5
PCAT1-202ENST00000561978 TNIKQ9UKE5 1360 aa18.17■□□□□ 0.5
PCAT1-202ENST00000561978 JPH4Q96JJ6 628 aa18.17■□□□□ 0.5
PCAT1-202ENST00000561978 ERCC6L2Q5T890 1561 aa18.14■□□□□ 0.49
PCAT1-202ENST00000561978 SHROOM2Q13796 1616 aa18.14■□□□□ 0.49
PCAT1-202ENST00000561978 PRG4Q92954 1404 aaPredicted RBP18.11■□□□□ 0.49
PCAT1-202ENST00000561978 GOLGA3Q08378 1498 aa18.11■□□□□ 0.49
PCAT1-202ENST00000561978 IQGAP2Q13576 1575 aa18.11■□□□□ 0.49
PCAT1-202ENST00000561978 KIF21BO75037 1637 aa18.11■□□□□ 0.49
PCAT1-202ENST00000561978 CTTNBP2Q8WZ74 1663 aa18.1■□□□□ 0.49
PCAT1-202ENST00000561978 CYB5RLQ6IPT4 315 aa18.1■□□□□ 0.49
PCAT1-202ENST00000561978 ARAP1Q96P48 1450 aa18.08■□□□□ 0.48
PCAT1-202ENST00000561978 UBTFP17480 764 aaKnown RBP18.08■□□□□ 0.48
PCAT1-202ENST00000561978 CEP162Q5TB80 1403 aa18.07■□□□□ 0.48
PCAT1-202ENST00000561978 MYT1Q01538 1121 aa18.05■□□□□ 0.48
PCAT1-202ENST00000561978 RANGAP1P46060 587 aaPredicted RBP18.04■□□□□ 0.48
PCAT1-202ENST00000561978 TTBK1Q5TCY1 1321 aaPredicted RBP18.02■□□□□ 0.48
PCAT1-202ENST00000561978 PELP1Q8IZL8 1130 aaKnown RBP18.01■□□□□ 0.47
PCAT1-202ENST00000561978 DISP1Q96F81 1524 aa17.99■□□□□ 0.47
PCAT1-202ENST00000561978 UGGT2Q9NYU1 1516 aa17.99■□□□□ 0.47
PCAT1-202ENST00000561978 CARMIL2Q6F5E8 1435 aa17.98■□□□□ 0.47
PCAT1-202ENST00000561978 CNKSR2Q8WXI2 1034 aa17.97■□□□□ 0.47
PCAT1-202ENST00000561978 KIAA0556O60303 1618 aa17.95■□□□□ 0.46
PCAT1-202ENST00000561978 P3H3Q8IVL6 736 aa17.94■□□□□ 0.46
PCAT1-202ENST00000561978 ZEB1P37275 1124 aaPredicted RBP17.91■□□□□ 0.46
PCAT1-202ENST00000561978 PTPRGP23470 1445 aa17.91■□□□□ 0.46
PCAT1-202ENST00000561978 HOXD11P31277 338 aaPredicted RBP17.87■□□□□ 0.45
PCAT1-202ENST00000561978 SAMD9Q5K651 1589 aa17.87■□□□□ 0.45
PCAT1-202ENST00000561978 CLIP1P30622 1438 aa17.85■□□□□ 0.45
PCAT1-202ENST00000561978 PPARGC1BQ86YN6 1023 aaKnown RBP17.84■□□□□ 0.45
PCAT1-202ENST00000561978 FHOD3Q2V2M9 1422 aa17.83■□□□□ 0.45
PCAT1-202ENST00000561978 ADCY10Q96PN6 1610 aa17.81■□□□□ 0.44
PCAT1-202ENST00000561978 PLB1Q6P1J6 1458 aa17.8■□□□□ 0.44
PCAT1-202ENST00000561978 EFCAB5A4FU69 1503 aa17.8■□□□□ 0.44
PCAT1-202ENST00000561978 ARHGAP35Q9NRY4 1499 aa17.79■□□□□ 0.44
PCAT1-202ENST00000561978 UACAQ9BZF9 1416 aa17.78■□□□□ 0.44
PCAT1-202ENST00000561978 RNF216Q9NWF9 866 aaPredicted RBP17.77■□□□□ 0.43
PCAT1-202ENST00000561978 VPS8Q8N3P4 1428 aa17.75■□□□□ 0.43
PCAT1-202ENST00000561978 ABCC2Q92887 1545 aa17.74■□□□□ 0.43
PCAT1-202ENST00000561978 ARID3CA6NKF2 412 aa17.73■□□□□ 0.43
PCAT1-202ENST00000561978 NPM1P06748 294 aaKnown RBP eCLIP17.73■□□□□ 0.43
PCAT1-202ENST00000561978 ABCA8O94911 1581 aa17.72■□□□□ 0.43
PCAT1-202ENST00000561978 UHRF1BP1LA0JNW5 1464 aa17.71■□□□□ 0.43
PCAT1-202ENST00000561978 APLP2Q06481 763 aa17.7■□□□□ 0.42
PCAT1-202ENST00000561978 DCAF8L1A6NGE4 600 aa17.68■□□□□ 0.42
PCAT1-202ENST00000561978 TRHP20396 242 aaPredicted RBP17.68■□□□□ 0.42
PCAT1-202ENST00000561978 RAPGEF6Q8TEU7 1601 aa17.67■□□□□ 0.42
PCAT1-202ENST00000561978 NCBP3Q53F19 620 aaKnown RBP17.66■□□□□ 0.42
PCAT1-202ENST00000561978 KDM5BQ9UGL1 1544 aa17.65■□□□□ 0.42
PCAT1-202ENST00000561978 ZCCHC11Q5TAX3 1644 aaKnown RBP17.65■□□□□ 0.42
PCAT1-202ENST00000561978 FMN1Q68DA7 1419 aa17.65■□□□□ 0.42
PCAT1-202ENST00000561978 SLC24A1O60721 1099 aa17.65■□□□□ 0.42
PCAT1-202ENST00000561978 ATP1B4Q9UN42 357 aaPredicted RBP17.65■□□□□ 0.42
PCAT1-202ENST00000561978 NUP153P49790 1475 aaKnown RBP17.63■□□□□ 0.41
PCAT1-202ENST00000561978 MAPKBP1O60336 1514 aa17.62■□□□□ 0.41
PCAT1-202ENST00000561978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.62■□□□□ 0.41
PCAT1-202ENST00000561978 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
PCAT1-202ENST00000561978 ASXL2Q76L83 1435 aa17.61■□□□□ 0.41
PCAT1-202ENST00000561978 ATP10BO94823 1461 aa17.6■□□□□ 0.41
PCAT1-202ENST00000561978 PCF11O94913 1555 aaKnown RBP17.57■□□□□ 0.4
PCAT1-202ENST00000561978 FAM69CQ0P6D2 419 aa17.55■□□□□ 0.4
PCAT1-202ENST00000561978 CDK13Q14004 1512 aaKnown RBP17.55■□□□□ 0.4
PCAT1-202ENST00000561978 HECW1Q76N89 1606 aa17.55■□□□□ 0.4
PCAT1-202ENST00000561978 KIF13AQ9H1H9 1805 aa17.55■□□□□ 0.4
PCAT1-202ENST00000561978 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
PCAT1-202ENST00000561978 CCER1Q8TC90 406 aaPredicted RBP17.55■□□□□ 0.4
PCAT1-202ENST00000561978 ABCC10Q5T3U5 1492 aa17.54■□□□□ 0.4
PCAT1-202ENST00000561978 KCNH8Q96L42 1107 aa17.53■□□□□ 0.4
PCAT1-202ENST00000561978 LRRIQ1Q96JM4 1722 aa17.53■□□□□ 0.4
PCAT1-202ENST00000561978 CASKIN1Q8WXD9 1431 aa17.53■□□□□ 0.4
PCAT1-202ENST00000561978 DIP2BQ9P265 1576 aa17.53■□□□□ 0.4
PCAT1-202ENST00000561978 WDR7Q9Y4E6 1490 aa17.53■□□□□ 0.4
PCAT1-202ENST00000561978 EPRSP07814 1512 aaKnown RBP17.53■□□□□ 0.4
PCAT1-202ENST00000561978 FYCO1Q9BQS8 1478 aa17.49■□□□□ 0.39
PCAT1-202ENST00000561978 PLEKHD1A6NEE1 506 aa17.48■□□□□ 0.39
PCAT1-202ENST00000561978 TSPOAP1O95153 1857 aa17.46■□□□□ 0.39
PCAT1-202ENST00000561978 KCNA4P22459 653 aa17.44■□□□□ 0.38
PCAT1-202ENST00000561978 CCDC18Q5T9S5 1454 aa17.43■□□□□ 0.38
PCAT1-202ENST00000561978 CDK11AQ9UQ88 783 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms