RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 PRG4Q92954 1404 aaPredicted RBP40.54■■■■■ 4.08
TMEM170A-202ENST00000561878 JPH4Q96JJ6 628 aa40.54■■■■■ 4.08
TMEM170A-202ENST00000561878 KIAA0586Q9BVV6 1533 aa40.42■■■■■ 4.06
TMEM170A-202ENST00000561878 CARMIL1Q5VZK9 1371 aa40.38■■■■■ 4.06
TMEM170A-202ENST00000561878 IQGAP2Q13576 1575 aa40.1■■■■■ 4.01
TMEM170A-202ENST00000561878 RAPGEF2Q9Y4G8 1499 aa40.08■■■■■ 4.01
TMEM170A-202ENST00000561878 NPM1P06748 294 aaKnown RBP eCLIP40.06■■■■■ 4
TMEM170A-202ENST00000561878 CARMIL2Q6F5E8 1435 aa40.05■■■■■ 4
TMEM170A-202ENST00000561878 ADCY10Q96PN6 1610 aa40.04■■■■■ 4
TMEM170A-202ENST00000561878 KIF13AQ9H1H9 1805 aa39.98■■■■□ 3.99
TMEM170A-202ENST00000561878 PTPRGP23470 1445 aa39.97■■■■□ 3.99
TMEM170A-202ENST00000561878 MAPKBP1O60336 1514 aa39.96■■■■□ 3.99
TMEM170A-202ENST00000561878 TNIKQ9UKE5 1360 aa39.94■■■■□ 3.98
TMEM170A-202ENST00000561878 ABCC10Q5T3U5 1492 aa39.86■■■■□ 3.97
TMEM170A-202ENST00000561878 UGGT2Q9NYU1 1516 aa39.85■■■■□ 3.97
TMEM170A-202ENST00000561878 TTBK1Q5TCY1 1321 aaPredicted RBP39.84■■■■□ 3.97
TMEM170A-202ENST00000561878 DISP1Q96F81 1524 aa39.82■■■■□ 3.97
TMEM170A-202ENST00000561878 CTTNBP2Q8WZ74 1663 aa39.8■■■■□ 3.96
TMEM170A-202ENST00000561878 FAM69CQ0P6D2 419 aa39.78■■■■□ 3.96
TMEM170A-202ENST00000561878 DIP2BQ9P265 1576 aa39.78■■■■□ 3.96
TMEM170A-202ENST00000561878 ABCC2Q92887 1545 aa39.73■■■■□ 3.95
TMEM170A-202ENST00000561878 PRXQ9BXM0 1461 aa39.73■■■■□ 3.95
TMEM170A-202ENST00000561878 KIAA0556O60303 1618 aa39.73■■■■□ 3.95
TMEM170A-202ENST00000561878 UHRF1BP1LA0JNW5 1464 aa39.7■■■■□ 3.95
TMEM170A-202ENST00000561878 UACAQ9BZF9 1416 aa39.68■■■■□ 3.94
TMEM170A-202ENST00000561878 GOLGA3Q08378 1498 aa39.6■■■■□ 3.93
TMEM170A-202ENST00000561878 PLB1Q6P1J6 1458 aa39.56■■■■□ 3.92
TMEM170A-202ENST00000561878 ASXL2Q76L83 1435 aa39.53■■■■□ 3.92
TMEM170A-202ENST00000561878 KDM5BQ9UGL1 1544 aa39.5■■■■□ 3.91
TMEM170A-202ENST00000561878 CSRNP3Q8WYN3 585 aa39.5■■■■□ 3.91
TMEM170A-202ENST00000561878 EEA1Q15075 1411 aa39.48■■■■□ 3.91
TMEM170A-202ENST00000561878 TSPOAP1O95153 1857 aa39.48■■■■□ 3.91
TMEM170A-202ENST00000561878 ZCCHC11Q5TAX3 1644 aaKnown RBP39.43■■■■□ 3.9
TMEM170A-202ENST00000561878 GLI2P10070 1586 aa39.42■■■■□ 3.9
TMEM170A-202ENST00000561878 KDM6BO15054 1643 aa39.37■■■■□ 3.89
TMEM170A-202ENST00000561878 AEBP2Q6ZN18 517 aaPredicted RBP39.33■■■■□ 3.89
TMEM170A-202ENST00000561878 ABCA8O94911 1581 aa39.32■■■■□ 3.88
TMEM170A-202ENST00000561878 EPRSP07814 1512 aaKnown RBP39.3■■■■□ 3.88
TMEM170A-202ENST00000561878 FAM9AQ8IZU1 332 aaPredicted RBP39.29■■■■□ 3.88
TMEM170A-202ENST00000561878 WDR7Q9Y4E6 1490 aa39.24■■■■□ 3.87
TMEM170A-202ENST00000561878 PPRC1Q5VV67 1664 aaKnown RBP39.23■■■■□ 3.87
TMEM170A-202ENST00000561878 MAP3K4Q9Y6R4 1608 aa39.22■■■■□ 3.87
TMEM170A-202ENST00000561878 SAMD9Q5K651 1589 aa39.2■■■■□ 3.87
TMEM170A-202ENST00000561878 P3H3Q8IVL6 736 aa39.16■■■■□ 3.86
TMEM170A-202ENST00000561878 TEX14Q8IWB6 1497 aa39.12■■■■□ 3.85
TMEM170A-202ENST00000561878 KIF21BO75037 1637 aa39.12■■■■□ 3.85
TMEM170A-202ENST00000561878 CHIC1Q5VXU3 224 aa39.02■■■■□ 3.84
TMEM170A-202ENST00000561878 CFAP43Q8NDM7 1665 aa39.01■■■■□ 3.84
TMEM170A-202ENST00000561878 RAPGEF6Q8TEU7 1601 aa39■■■■□ 3.83
TMEM170A-202ENST00000561878 KCNH8Q96L42 1107 aa38.98■■■■□ 3.83
TMEM170A-202ENST00000561878 ATP10BO94823 1461 aa38.97■■■■□ 3.83
TMEM170A-202ENST00000561878 RANGAP1P46060 587 aaPredicted RBP38.96■■■■□ 3.83
TMEM170A-202ENST00000561878 CD109Q6YHK3 1445 aa38.94■■■■□ 3.82
TMEM170A-202ENST00000561878 ARID3CA6NKF2 412 aa38.93■■■■□ 3.82
TMEM170A-202ENST00000561878 EFCAB5A4FU69 1503 aa38.92■■■■□ 3.82
TMEM170A-202ENST00000561878 MAGI3Q5TCQ9 1506 aa38.91■■■■□ 3.82
TMEM170A-202ENST00000561878 FHOD3Q2V2M9 1422 aa38.9■■■■□ 3.82
TMEM170A-202ENST00000561878 COL17A1Q9UMD9 1497 aaPredicted RBP38.88■■■■□ 3.81
TMEM170A-202ENST00000561878 NUP153P49790 1475 aaKnown RBP38.8■■■■□ 3.8
TMEM170A-202ENST00000561878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.79■■■■□ 3.8
TMEM170A-202ENST00000561878 HNRNPUL2Q1KMD3 747 aaKnown RBP38.79■■■■□ 3.8
TMEM170A-202ENST00000561878 UBTFP17480 764 aaKnown RBP38.78■■■■□ 3.8
TMEM170A-202ENST00000561878 ABCA9Q8IUA7 1624 aa38.75■■■■□ 3.79
TMEM170A-202ENST00000561878 KDM4FA0A1W2PPD8 638 aa38.72■■■■□ 3.79
TMEM170A-202ENST00000561878 EHMT2Q96KQ7 1210 aa38.71■■■■□ 3.79
TMEM170A-202ENST00000561878 ARAP3Q8WWN8 1544 aa38.6■■■■□ 3.77
TMEM170A-202ENST00000561878 PLEKHD1A6NEE1 506 aa38.6■■■■□ 3.77
TMEM170A-202ENST00000561878 PHLDB1Q86UU1 1377 aa38.59■■■■□ 3.77
TMEM170A-202ENST00000561878 ADGRL1O94910 1474 aa38.57■■■■□ 3.76
TMEM170A-202ENST00000561878 FMN1Q68DA7 1419 aa38.55■■■■□ 3.76
TMEM170A-202ENST00000561878 ARHGAP35Q9NRY4 1499 aa38.54■■■■□ 3.76
TMEM170A-202ENST00000561878 NEO1Q92859 1461 aa38.53■■■■□ 3.76
TMEM170A-202ENST00000561878 HECW1Q76N89 1606 aa38.48■■■■□ 3.75
TMEM170A-202ENST00000561878 CDK13Q14004 1512 aaKnown RBP38.46■■■■□ 3.75
TMEM170A-202ENST00000561878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.4■■■■□ 3.746e-6■■■■□ 21.5
TMEM170A-202ENST00000561878 ATP1B4Q9UN42 357 aaPredicted RBP38.4■■■■□ 3.74
TMEM170A-202ENST00000561878 CFAP74Q9C0B2 1584 aa38.37■■■■□ 3.73
TMEM170A-202ENST00000561878 TTC37Q6PGP7 1564 aa38.35■■■■□ 3.73
TMEM170A-202ENST00000561878 FANCAO15360 1455 aa38.31■■■■□ 3.72
TMEM170A-202ENST00000561878 RAPGEF3O95398 923 aa38.31■■■■□ 3.72
TMEM170A-202ENST00000561878 CDK11AQ9UQ88 783 aaPredicted RBP38.3■■■■□ 3.72
TMEM170A-202ENST00000561878 FRMPD1Q5SYB0 1578 aa38.27■■■■□ 3.72
TMEM170A-202ENST00000561878 AKNAQ7Z591 1439 aa38.27■■■■□ 3.72
TMEM170A-202ENST00000561878 DENND4BO75064 1496 aaPredicted RBP38.23■■■■□ 3.71
TMEM170A-202ENST00000561878 RICTORQ6R327 1708 aa38.19■■■■□ 3.7
TMEM170A-202ENST00000561878 KIF14Q15058 1648 aa38.17■■■■□ 3.7
TMEM170A-202ENST00000561878 PLCH2O75038 1416 aa38.17■■■■□ 3.7
TMEM170A-202ENST00000561878 LRRIQ1Q96JM4 1722 aa38.17■■■■□ 3.7
TMEM170A-202ENST00000561878 MYO5CQ9NQX4 1742 aa38.15■■■■□ 3.7
TMEM170A-202ENST00000561878 CLIP1P30622 1438 aa38.15■■■■□ 3.7
TMEM170A-202ENST00000561878 TROQ12816 1431 aaPredicted RBP38.15■■■■□ 3.7
TMEM170A-202ENST00000561878 PCF11O94913 1555 aaKnown RBP38.14■■■■□ 3.7
TMEM170A-202ENST00000561878 CASKIN1Q8WXD9 1431 aa38.14■■■■□ 3.7
TMEM170A-202ENST00000561878 CCDC18Q5T9S5 1454 aa38.12■■■■□ 3.69
TMEM170A-202ENST00000561878 ARHGEF40Q8TER5 1519 aa38.1■■■■□ 3.69
TMEM170A-202ENST00000561878 ZMYM4Q5VZL5 1548 aa38.07■■■■□ 3.69
TMEM170A-202ENST00000561878 EFCAB2Q5VUJ9 269 aa38.04■■■■□ 3.68
TMEM170A-202ENST00000561878 FYCO1Q9BQS8 1478 aa38.03■■■■□ 3.68
TMEM170A-202ENST00000561878 SCAPERQ9BY12 1400 aa38.02■■■■□ 3.68
TMEM170A-202ENST00000561878 ADAMTSL3P82987 1691 aa38.01■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms