RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 PBRM1Q86U86 1689 aa18.6■□□□□ 0.57
AC010542.3-202ENST00000561728 SPATA31D1Q6ZQQ2 1576 aa18.6■□□□□ 0.57
AC010542.3-202ENST00000561728 FGD5Q6ZNL6 1462 aa18.59■□□□□ 0.57
AC010542.3-202ENST00000561728 SHROOM2Q13796 1616 aa18.59■□□□□ 0.57
AC010542.3-202ENST00000561728 TOP2BQ02880 1626 aa18.58■□□□□ 0.56
AC010542.3-202ENST00000561728 CCDC88BA6NC98 1476 aa18.57■□□□□ 0.56
AC010542.3-202ENST00000561728 GRIN2AQ12879 1464 aa18.57■□□□□ 0.56
AC010542.3-202ENST00000561728 NUP160Q12769 1436 aa18.55■□□□□ 0.56
AC010542.3-202ENST00000561728 PRG4Q92954 1404 aaPredicted RBP18.52■□□□□ 0.56
AC010542.3-202ENST00000561728 CERKQ8TCT0 537 aa18.48■□□□□ 0.55
AC010542.3-202ENST00000561728 ADCY10Q96PN6 1610 aa18.46■□□□□ 0.55
AC010542.3-202ENST00000561728 SENP3Q9H4L4 574 aaPredicted RBP18.45■□□□□ 0.54
AC010542.3-202ENST00000561728 COL17A1Q9UMD9 1497 aaPredicted RBP18.41■□□□□ 0.54
AC010542.3-202ENST00000561728 PPRC1Q5VV67 1664 aaKnown RBP18.41■□□□□ 0.54
AC010542.3-202ENST00000561728 JPH4Q96JJ6 628 aa18.38■□□□□ 0.53
AC010542.3-202ENST00000561728 ABCA5Q8WWZ7 1642 aa18.36■□□□□ 0.53
AC010542.3-202ENST00000561728 ADAMTS12P58397 1594 aa18.35■□□□□ 0.53
AC010542.3-202ENST00000561728 PCF11O94913 1555 aaKnown RBP18.31■□□□□ 0.52
AC010542.3-202ENST00000561728 CUX1P39880 1505 aa18.31■□□□□ 0.52
AC010542.3-202ENST00000561728 GLI2P10070 1586 aa18.3■□□□□ 0.52
AC010542.3-202ENST00000561728 ABCA10Q8WWZ4 1543 aa18.28■□□□□ 0.52
AC010542.3-202ENST00000561728 TEX14Q8IWB6 1497 aa18.27■□□□□ 0.52
AC010542.3-202ENST00000561728 FHAD1B1AJZ9 1412 aa18.27■□□□□ 0.52
AC010542.3-202ENST00000561728 PTPRMP28827 1452 aa18.26■□□□□ 0.51
AC010542.3-202ENST00000561728 PLB1Q6P1J6 1458 aa18.24■□□□□ 0.51
AC010542.3-202ENST00000561728 ASXL2Q76L83 1435 aa18.22■□□□□ 0.51
AC010542.3-202ENST00000561728 KIF21BO75037 1637 aa18.18■□□□□ 0.5
AC010542.3-202ENST00000561728 HSPA2P54652 639 aa18.15■□□□□ 0.5
AC010542.3-202ENST00000561728 MAP3K4Q9Y6R4 1608 aa18.15■□□□□ 0.5
AC010542.3-202ENST00000561728 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
AC010542.3-202ENST00000561728 ABCC2Q92887 1545 aa18.13■□□□□ 0.49
AC010542.3-202ENST00000561728 ADAMTSL3P82987 1691 aa18.09■□□□□ 0.49
AC010542.3-202ENST00000561728 EPRSP07814 1512 aaKnown RBP18.08■□□□□ 0.49
AC010542.3-202ENST00000561728 KIAA0586Q9BVV6 1533 aa18.07■□□□□ 0.48
AC010542.3-202ENST00000561728 TTBK1Q5TCY1 1321 aaPredicted RBP18.06■□□□□ 0.48
AC010542.3-202ENST00000561728 PTPRGP23470 1445 aa18.05■□□□□ 0.48
AC010542.3-202ENST00000561728 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
AC010542.3-202ENST00000561728 CUL7Q14999 1698 aa18.02■□□□□ 0.47
AC010542.3-202ENST00000561728 MADDQ8WXG6 1647 aa17.97■□□□□ 0.47
AC010542.3-202ENST00000561728 WRNQ14191 1432 aaPredicted RBP eCLIP17.96■□□□□ 0.47
AC010542.3-202ENST00000561728 ARID4BQ4LE39 1312 aaPredicted RBP17.93■□□□□ 0.46
AC010542.3-202ENST00000561728 PLPPR3Q6T4P5 718 aa17.92■□□□□ 0.46
AC010542.3-202ENST00000561728 BCORL1Q5H9F3 1711 aa17.92■□□□□ 0.46
AC010542.3-202ENST00000561728 UHRF1BP1LA0JNW5 1464 aa17.9■□□□□ 0.46
AC010542.3-202ENST00000561728 DMRT2Q9Y5R5 561 aa17.9■□□□□ 0.46
AC010542.3-202ENST00000561728 TNIKQ9UKE5 1360 aa17.89■□□□□ 0.45
AC010542.3-202ENST00000561728 MAGI3Q5TCQ9 1506 aa17.88■□□□□ 0.45
AC010542.3-202ENST00000561728 RIMS1Q86UR5 1692 aaKnown RBP17.87■□□□□ 0.45
AC010542.3-202ENST00000561728 CD109Q6YHK3 1445 aa17.87■□□□□ 0.45
AC010542.3-202ENST00000561728 UACAQ9BZF9 1416 aa17.85■□□□□ 0.45
AC010542.3-202ENST00000561728 KDM5BQ9UGL1 1544 aa17.83■□□□□ 0.45
AC010542.3-202ENST00000561728 CARMIL2Q6F5E8 1435 aa17.82■□□□□ 0.44
AC010542.3-202ENST00000561728 YEATS2Q9ULM3 1422 aa17.81■□□□□ 0.44
AC010542.3-202ENST00000561728 WDR7Q9Y4E6 1490 aa17.81■□□□□ 0.44
AC010542.3-202ENST00000561728 IQSEC2Q5JU85 1478 aa17.8■□□□□ 0.44
AC010542.3-202ENST00000561728 ZCCHC11Q5TAX3 1644 aaKnown RBP17.8■□□□□ 0.44
AC010542.3-202ENST00000561728 MED1Q15648 1581 aaPredicted RBP17.79■□□□□ 0.44
AC010542.3-202ENST00000561728 CFAP43Q8NDM7 1665 aa17.79■□□□□ 0.44
AC010542.3-202ENST00000561728 ARAP3Q8WWN8 1544 aa17.78■□□□□ 0.44
AC010542.3-202ENST00000561728 UBAP1LF5GYI3 381 aa17.71■□□□□ 0.43
AC010542.3-202ENST00000561728 KCNH8Q96L42 1107 aa17.71■□□□□ 0.43
AC010542.3-202ENST00000561728 STRCQ7RTU9 1775 aa17.69■□□□□ 0.42
AC010542.3-202ENST00000561728 LTBP4Q8N2S1 1624 aa17.68■□□□□ 0.42
AC010542.3-202ENST00000561728 PTPRTO14522 1441 aa17.66■□□□□ 0.42
AC010542.3-202ENST00000561728 RAPGEF3O95398 923 aa17.66■□□□□ 0.42
AC010542.3-202ENST00000561728 PREX1Q8TCU6 1659 aa17.64■□□□□ 0.42
AC010542.3-202ENST00000561728 POGZQ7Z3K3 1410 aa17.64■□□□□ 0.42
AC010542.3-202ENST00000561728 PHLDB1Q86UU1 1377 aa17.63■□□□□ 0.41
AC010542.3-202ENST00000561728 BIVM-ERCC5R4GMW8 1640 aa17.62■□□□□ 0.41
AC010542.3-202ENST00000561728 FANCAO15360 1455 aa17.57■□□□□ 0.4
AC010542.3-202ENST00000561728 HSPA1LP34931 641 aa17.57■□□□□ 0.4
AC010542.3-202ENST00000561728 ARHGEF40Q8TER5 1519 aa17.56■□□□□ 0.4
AC010542.3-202ENST00000561728 TTC37Q6PGP7 1564 aa17.55■□□□□ 0.4
AC010542.3-202ENST00000561728 UHRF1BP1Q6BDS2 1440 aa17.55■□□□□ 0.4
AC010542.3-202ENST00000561728 SCAF1Q9H7N4 1312 aaKnown RBP17.54■□□□□ 0.4
AC010542.3-202ENST00000561728 FER1L4A9Z1Z3 1794 aa17.53■□□□□ 0.4
AC010542.3-202ENST00000561728 MLECQ14165 292 aa17.53■□□□□ 0.4
AC010542.3-202ENST00000561728 IQGAP2Q13576 1575 aa17.52■□□□□ 0.39
AC010542.3-202ENST00000561728 DISP1Q96F81 1524 aa17.52■□□□□ 0.39
AC010542.3-202ENST00000561728 FRMPD1Q5SYB0 1578 aa17.51■□□□□ 0.39
AC010542.3-202ENST00000561728 NEO1Q92859 1461 aa17.47■□□□□ 0.39
AC010542.3-202ENST00000561728 AKNAQ7Z591 1439 aa17.47■□□□□ 0.39
AC010542.3-202ENST00000561728 CEBPAP49715 358 aaPredicted RBP17.45■□□□□ 0.38
AC010542.3-202ENST00000561728 PIP4K2BP78356 416 aa17.45■□□□□ 0.38
AC010542.3-202ENST00000561728 IGF1RP08069 1367 aa17.44■□□□□ 0.38
AC010542.3-202ENST00000561728 ZNF335Q9H4Z2 1342 aaPredicted RBP17.41■□□□□ 0.38
AC010542.3-202ENST00000561728 SETD1BQ9UPS6 1966 aaKnown RBP17.4■□□□□ 0.38
AC010542.3-202ENST00000561728 KIAA0556O60303 1618 aa17.37■□□□□ 0.37
AC010542.3-202ENST00000561728 DENND4BO75064 1496 aaPredicted RBP17.37■□□□□ 0.37
AC010542.3-202ENST00000561728 ABCA9Q8IUA7 1624 aa17.36■□□□□ 0.37
AC010542.3-202ENST00000561728 SIGLEC1Q9BZZ2 1709 aa17.36■□□□□ 0.37
AC010542.3-202ENST00000561728 TOM1O60784 492 aa17.36■□□□□ 0.37
AC010542.3-202ENST00000561728 NCOA1Q15788 1441 aa17.36■□□□□ 0.37
AC010542.3-202ENST00000561728 ZFYVE16Q7Z3T8 1539 aa17.35■□□□□ 0.37
AC010542.3-202ENST00000561728 ARHGEF12Q9NZN5 1544 aa17.35■□□□□ 0.37
AC010542.3-202ENST00000561728 EFCAB5A4FU69 1503 aa17.33■□□□□ 0.37
AC010542.3-202ENST00000561728 UGGT2Q9NYU1 1516 aa17.33■□□□□ 0.37
AC010542.3-202ENST00000561728 CARMIL1Q5VZK9 1371 aa17.33■□□□□ 0.36
AC010542.3-202ENST00000561728 RICTORQ6R327 1708 aa17.31■□□□□ 0.36
AC010542.3-202ENST00000561728 RGS17Q9UGC6 210 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms