RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 ARHGEF11O15085 1522 aa26.81■■□□□ 1.88
USB1-204ENST00000561568 KIF21BO75037 1637 aa26.79■■□□□ 1.88
USB1-204ENST00000561568 PRG4Q92954 1404 aaPredicted RBP26.77■■□□□ 1.88
USB1-204ENST00000561568 SHROOM2Q13796 1616 aa26.76■■□□□ 1.87
USB1-204ENST00000561568 UBTFP17480 764 aaKnown RBP26.76■■□□□ 1.87
USB1-204ENST00000561568 RIMBP3CA6NJZ7 1639 aa26.75■■□□□ 1.87
USB1-204ENST00000561568 RIMBP3BA6NNM3 1639 aa26.75■■□□□ 1.87
USB1-204ENST00000561568 RIMBP3Q9UFD9 1639 aa26.75■■□□□ 1.87
USB1-204ENST00000561568 IQGAP2Q13576 1575 aa26.75■■□□□ 1.87
USB1-204ENST00000561568 EHMT2Q96KQ7 1210 aa26.73■■□□□ 1.87
USB1-204ENST00000561568 GOLGA3Q08378 1498 aa26.72■■□□□ 1.87
USB1-204ENST00000561568 CYB5RLQ6IPT4 315 aa26.71■■□□□ 1.87
USB1-204ENST00000561568 CARMIL2Q6F5E8 1435 aa26.68■■□□□ 1.86
USB1-204ENST00000561568 CTTNBP2Q8WZ74 1663 aa26.66■■□□□ 1.86
USB1-204ENST00000561568 UGGT2Q9NYU1 1516 aa26.64■■□□□ 1.85
USB1-204ENST00000561568 ERCC6L2Q5T890 1561 aa26.63■■□□□ 1.85
USB1-204ENST00000561568 ARAP1Q96P48 1450 aa26.61■■□□□ 1.85
USB1-204ENST00000561568 TNIKQ9UKE5 1360 aa26.56■■□□□ 1.84
USB1-204ENST00000561568 DISP1Q96F81 1524 aa26.55■■□□□ 1.84
USB1-204ENST00000561568 RANGAP1P46060 587 aaPredicted RBP26.54■■□□□ 1.84
USB1-204ENST00000561568 PTPRGP23470 1445 aa26.54■■□□□ 1.84
USB1-204ENST00000561568 TTBK1Q5TCY1 1321 aaPredicted RBP26.48■■□□□ 1.83
USB1-204ENST00000561568 LOC105371045A0A1W2PR82 267 aa26.48■■□□□ 1.83
USB1-204ENST00000561568 P3H3Q8IVL6 736 aa26.48■■□□□ 1.83
USB1-204ENST00000561568 KIAA0556O60303 1618 aa26.46■■□□□ 1.83
USB1-204ENST00000561568 SAMD9Q5K651 1589 aa26.37■■□□□ 1.81
USB1-204ENST00000561568 NPM1P06748 294 aaKnown RBP eCLIP26.37■■□□□ 1.81
USB1-204ENST00000561568 EFCAB5A4FU69 1503 aa26.37■■□□□ 1.81
USB1-204ENST00000561568 UACAQ9BZF9 1416 aa26.33■■□□□ 1.81
USB1-204ENST00000561568 FHOD3Q2V2M9 1422 aa26.29■■□□□ 1.8
USB1-204ENST00000561568 ARHGAP35Q9NRY4 1499 aa26.29■■□□□ 1.8
USB1-204ENST00000561568 CLIP1P30622 1438 aa26.27■■□□□ 1.8
USB1-204ENST00000561568 UHRF1BP1LA0JNW5 1464 aa26.27■■□□□ 1.8
USB1-204ENST00000561568 PLB1Q6P1J6 1458 aa26.23■■□□□ 1.79
USB1-204ENST00000561568 FMN1Q68DA7 1419 aa26.21■■□□□ 1.79
USB1-204ENST00000561568 ADCY10Q96PN6 1610 aa26.21■■□□□ 1.79
USB1-204ENST00000561568 ABCC2Q92887 1545 aa26.2■■□□□ 1.79
USB1-204ENST00000561568 CEP162Q5TB80 1403 aa26.19■■□□□ 1.78
USB1-204ENST00000561568 ABCA8O94911 1581 aa26.18■■□□□ 1.78
USB1-204ENST00000561568 KDM5BQ9UGL1 1544 aa26.13■■□□□ 1.77
USB1-204ENST00000561568 ATP1B4Q9UN42 357 aaPredicted RBP26.1■■□□□ 1.77
USB1-204ENST00000561568 RAPGEF6Q8TEU7 1601 aa26.09■■□□□ 1.77
USB1-204ENST00000561568 TRHP20396 242 aaPredicted RBP26.08■■□□□ 1.77
USB1-204ENST00000561568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.06■■□□□ 1.76
USB1-204ENST00000561568 HNRNPUL2Q1KMD3 747 aaKnown RBP26.06■■□□□ 1.76
USB1-204ENST00000561568 ARID3CA6NKF2 412 aa26.05■■□□□ 1.76
USB1-204ENST00000561568 ATP10BO94823 1461 aa26.04■■□□□ 1.76
USB1-204ENST00000561568 MAPKBP1O60336 1514 aa26.04■■□□□ 1.76
USB1-204ENST00000561568 NUP153P49790 1475 aaKnown RBP26.02■■□□□ 1.76
USB1-204ENST00000561568 ASXL2Q76L83 1435 aa26■■□□□ 1.75
USB1-204ENST00000561568 CASKIN1Q8WXD9 1431 aa26■■□□□ 1.75
USB1-204ENST00000561568 ZCCHC11Q5TAX3 1644 aaKnown RBP25.99■■□□□ 1.75
USB1-204ENST00000561568 PLEKHD1A6NEE1 506 aa25.98■■□□□ 1.75
USB1-204ENST00000561568 CDK11AQ9UQ88 783 aaPredicted RBP25.96■■□□□ 1.75
USB1-204ENST00000561568 FAM69CQ0P6D2 419 aa25.95■■□□□ 1.74
USB1-204ENST00000561568 HECW1Q76N89 1606 aa25.93■■□□□ 1.74
USB1-204ENST00000561568 ABCC10Q5T3U5 1492 aa25.92■■□□□ 1.74
USB1-204ENST00000561568 EPRSP07814 1512 aaKnown RBP25.92■■□□□ 1.74
USB1-204ENST00000561568 KCNH8Q96L42 1107 aa25.91■■□□□ 1.74
USB1-204ENST00000561568 FYCO1Q9BQS8 1478 aa25.91■■□□□ 1.74
USB1-204ENST00000561568 WDR7Q9Y4E6 1490 aa25.9■■□□□ 1.74
USB1-204ENST00000561568 VPS8Q8N3P4 1428 aa25.88■■□□□ 1.73
USB1-204ENST00000561568 PCF11O94913 1555 aaKnown RBP25.86■■□□□ 1.73
USB1-204ENST00000561568 CCDC18Q5T9S5 1454 aa25.85■■□□□ 1.73
USB1-204ENST00000561568 CDK13Q14004 1512 aaKnown RBP25.83■■□□□ 1.73
USB1-204ENST00000561568 DIP2BQ9P265 1576 aa25.8■■□□□ 1.72
USB1-204ENST00000561568 GLI2P10070 1586 aa25.78■■□□□ 1.72
USB1-204ENST00000561568 KIF13AQ9H1H9 1805 aa25.75■■□□□ 1.71
USB1-204ENST00000561568 APLP2Q06481 763 aa25.75■■□□□ 1.71
USB1-204ENST00000561568 LRRIQ1Q96JM4 1722 aa25.72■■□□□ 1.71
USB1-204ENST00000561568 TROQ12816 1431 aaPredicted RBP25.71■■□□□ 1.71
USB1-204ENST00000561568 CD109Q6YHK3 1445 aa25.7■■□□□ 1.7
USB1-204ENST00000561568 MTUS2Q5JR59 1369 aa25.67■■□□□ 1.7
USB1-204ENST00000561568 MAP3K1Q13233 1512 aa25.64■■□□□ 1.7
USB1-204ENST00000561568 ABCA9Q8IUA7 1624 aa25.62■■□□□ 1.69
USB1-204ENST00000561568 MAP3K4Q9Y6R4 1608 aa25.62■■□□□ 1.69
USB1-204ENST00000561568 CFAP43Q8NDM7 1665 aa25.61■■□□□ 1.69
USB1-204ENST00000561568 MAGI3Q5TCQ9 1506 aa25.59■■□□□ 1.69
USB1-204ENST00000561568 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.59■■□□□ 1.69
USB1-204ENST00000561568 TEX14Q8IWB6 1497 aa25.59■■□□□ 1.69
USB1-204ENST00000561568 TIAM1Q13009 1591 aa25.58■■□□□ 1.69
USB1-204ENST00000561568 TSPOAP1O95153 1857 aa25.57■■□□□ 1.68
USB1-204ENST00000561568 KIF14Q15058 1648 aa25.56■■□□□ 1.68
USB1-204ENST00000561568 KANK4Q5T7N3 995 aaPredicted RBP25.56■■□□□ 1.68
USB1-204ENST00000561568 PLCH2O75038 1416 aa25.54■■□□□ 1.68
USB1-204ENST00000561568 PHLDB1Q86UU1 1377 aa25.53■■□□□ 1.68
USB1-204ENST00000561568 LRRC9Q6ZRR7 1453 aa25.53■■□□□ 1.68
USB1-204ENST00000561568 EHBP1L1Q8N3D4 1523 aa25.52■■□□□ 1.68
USB1-204ENST00000561568 EFCAB2Q5VUJ9 269 aa25.51■■□□□ 1.67
USB1-204ENST00000561568 TTC37Q6PGP7 1564 aa25.48■■□□□ 1.67
USB1-204ENST00000561568 PPRC1Q5VV67 1664 aaKnown RBP25.48■■□□□ 1.67
USB1-204ENST00000561568 CCNB3Q8WWL7 1395 aa25.47■■□□□ 1.67
USB1-204ENST00000561568 NEO1Q92859 1461 aa25.45■■□□□ 1.66
USB1-204ENST00000561568 ARAP3Q8WWN8 1544 aa25.43■■□□□ 1.66
USB1-204ENST00000561568 FANCAO15360 1455 aa25.43■■□□□ 1.66
USB1-204ENST00000561568 CFDP1Q9UEE9 299 aaPredicted RBP25.43■■□□□ 1.66
USB1-204ENST00000561568 GPATCH8Q9UKJ3 1502 aaKnown RBP25.42■■□□□ 1.66
USB1-204ENST00000561568 NCOA2Q15596 1464 aa25.4■■□□□ 1.66
USB1-204ENST00000561568 SUPT6HQ7KZ85 1726 aaKnown RBP25.4■■□□□ 1.66
USB1-204ENST00000561568 MYO5CQ9NQX4 1742 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms