RNA–Protein interactions for RNA: ENST00000561441.5

AP4E1-207, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 2

Gene AP4E1, Length 1,603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-207ENST00000561441 ARHGAP35Q9NRY4 1499 aa42.22■■■■■ 4.35
AP4E1-207ENST00000561441 CHMP7Q8WUX9 453 aaPredicted RBP42.17■■■■■ 4.34
AP4E1-207ENST00000561441 ARAP1Q96P48 1450 aa42.17■■■■■ 4.34
AP4E1-207ENST00000561441 VPS8Q8N3P4 1428 aa42.14■■■■■ 4.34
AP4E1-207ENST00000561441 FBLN2P98095 1184 aa42.07■■■■■ 4.33
AP4E1-207ENST00000561441 EFCAB5A4FU69 1503 aa42.02■■■■■ 4.32
AP4E1-207ENST00000561441 IQGAP2Q13576 1575 aa42■■■■■ 4.31
AP4E1-207ENST00000561441 KIAA0586Q9BVV6 1533 aa41.99■■■■■ 4.31
AP4E1-207ENST00000561441 NUP160Q12769 1436 aa41.95■■■■■ 4.31
AP4E1-207ENST00000561441 CEP170Q5SW79 1584 aa41.94■■■■■ 4.3
AP4E1-207ENST00000561441 P3H3Q8IVL6 736 aa41.91■■■■■ 4.3
AP4E1-207ENST00000561441 SAMD9Q5K651 1589 aa41.9■■■■■ 4.3
AP4E1-207ENST00000561441 FHOD3Q2V2M9 1422 aa41.85■■■■■ 4.29
AP4E1-207ENST00000561441 UGGT2Q9NYU1 1516 aa41.83■■■■■ 4.29
AP4E1-207ENST00000561441 CHD1O14646 1710 aa41.79■■■■■ 4.28
AP4E1-207ENST00000561441 PPARGC1BQ86YN6 1023 aaKnown RBP41.79■■■■■ 4.28
AP4E1-207ENST00000561441 APLP2Q06481 763 aa41.69■■■■■ 4.27
AP4E1-207ENST00000561441 FMN1Q68DA7 1419 aa41.66■■■■■ 4.26
AP4E1-207ENST00000561441 DISP1Q96F81 1524 aa41.64■■■■■ 4.26
AP4E1-207ENST00000561441 JPH4Q96JJ6 628 aa41.62■■■■■ 4.25
AP4E1-207ENST00000561441 TRIM26Q12899 539 aaPredicted RBP41.61■■■■■ 4.25
AP4E1-207ENST00000561441 KIAA0556O60303 1618 aa41.58■■■■■ 4.25
AP4E1-207ENST00000561441 PCF11O94913 1555 aaKnown RBP41.57■■■■■ 4.25
AP4E1-207ENST00000561441 CASKIN1Q8WXD9 1431 aa41.55■■■■■ 4.24
AP4E1-207ENST00000561441 FYCO1Q9BQS8 1478 aa41.52■■■■■ 4.24
AP4E1-207ENST00000561441 PCGF6Q9BYE7 350 aa41.51■■■■■ 4.23
AP4E1-207ENST00000561441 TTBK1Q5TCY1 1321 aaPredicted RBP41.49■■■■■ 4.23
AP4E1-207ENST00000561441 CARMIL2Q6F5E8 1435 aa41.46■■■■■ 4.23
AP4E1-207ENST00000561441 MAP3K1Q13233 1512 aa41.45■■■■■ 4.23
AP4E1-207ENST00000561441 ATP1B4Q9UN42 357 aaPredicted RBP41.41■■■■■ 4.22
AP4E1-207ENST00000561441 KANK4Q5T7N3 995 aaPredicted RBP41.39■■■■■ 4.22
AP4E1-207ENST00000561441 TIAM1Q13009 1591 aa41.38■■■■■ 4.21
AP4E1-207ENST00000561441 CLASP1Q7Z460 1538 aa41.38■■■■■ 4.21
AP4E1-207ENST00000561441 PRG4Q92954 1404 aaPredicted RBP41.36■■■■■ 4.21
AP4E1-207ENST00000561441 SHROOM2Q13796 1616 aa41.36■■■■■ 4.21
AP4E1-207ENST00000561441 CFAP43Q8NDM7 1665 aa41.28■■■■■ 4.2
AP4E1-207ENST00000561441 LRRC9Q6ZRR7 1453 aa41.22■■■■■ 4.19
AP4E1-207ENST00000561441 HECW1Q76N89 1606 aa41.22■■■■■ 4.19
AP4E1-207ENST00000561441 LRRIQ1Q96JM4 1722 aa41.17■■■■■ 4.18
AP4E1-207ENST00000561441 RAPGEF6Q8TEU7 1601 aa41.14■■■■■ 4.18
AP4E1-207ENST00000561441 CCDC18Q5T9S5 1454 aa41.13■■■■■ 4.18
AP4E1-207ENST00000561441 OSCARQ8IYS5 282 aa41.13■■■■■ 4.17
AP4E1-207ENST00000561441 EPRSP07814 1512 aaKnown RBP41.1■■■■■ 4.17
AP4E1-207ENST00000561441 PLB1Q6P1J6 1458 aa41.1■■■■■ 4.17
AP4E1-207ENST00000561441 ERCC6L2Q5T890 1561 aa41.1■■■■■ 4.17
AP4E1-207ENST00000561441 PTPRGP23470 1445 aa41.09■■■■■ 4.17
AP4E1-207ENST00000561441 NUP153P49790 1475 aaKnown RBP41.07■■■■■ 4.17
AP4E1-207ENST00000561441 ABCA8O94911 1581 aa41.02■■■■■ 4.16
AP4E1-207ENST00000561441 CDK13Q14004 1512 aaKnown RBP41■■■■■ 4.15
AP4E1-207ENST00000561441 MTUS2Q5JR59 1369 aa40.98■■■■■ 4.15
AP4E1-207ENST00000561441 ARID3CA6NKF2 412 aa40.96■■■■■ 4.15
AP4E1-207ENST00000561441 MAGI3Q5TCQ9 1506 aa40.91■■■■■ 4.14
AP4E1-207ENST00000561441 EHBP1L1Q8N3D4 1523 aa40.89■■■■■ 4.14
AP4E1-207ENST00000561441 UACAQ9BZF9 1416 aa40.86■■■■■ 4.13
AP4E1-207ENST00000561441 PHLDB1Q86UU1 1377 aa40.84■■■■■ 4.13
AP4E1-207ENST00000561441 RRBP1Q9P2E9 1410 aaKnown RBP40.84■■■■■ 4.13
AP4E1-207ENST00000561441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.8■■■■■ 4.12
AP4E1-207ENST00000561441 HNRNPUL2Q1KMD3 747 aaKnown RBP40.8■■■■■ 4.12
AP4E1-207ENST00000561441 CDK11AQ9UQ88 783 aaPredicted RBP40.78■■■■■ 4.12
AP4E1-207ENST00000561441 ATP10BO94823 1461 aa40.77■■■■■ 4.12
AP4E1-207ENST00000561441 NCOA2Q15596 1464 aa40.75■■■■■ 4.11
AP4E1-207ENST00000561441 SUPT6HQ7KZ85 1726 aaKnown RBP40.74■■■■■ 4.11
AP4E1-207ENST00000561441 CCNB3Q8WWL7 1395 aa40.73■■■■■ 4.11
AP4E1-207ENST00000561441 ABCC2Q92887 1545 aa40.71■■■■■ 4.11
AP4E1-207ENST00000561441 ARHGEF11O15085 1522 aa40.7■■■■■ 4.11
AP4E1-207ENST00000561441 TROQ12816 1431 aaPredicted RBP40.65■■■■■ 4.1
AP4E1-207ENST00000561441 UHRF1BP1LA0JNW5 1464 aa40.65■■■■■ 4.1
AP4E1-207ENST00000561441 PLEKHD1A6NEE1 506 aa40.58■■■■■ 4.09
AP4E1-207ENST00000561441 MYOM3Q5VTT5 1437 aa40.58■■■■■ 4.09
AP4E1-207ENST00000561441 FGD6Q6ZV73 1430 aa40.56■■■■■ 4.08
AP4E1-207ENST00000561441 KDM5BQ9UGL1 1544 aa40.48■■■■■ 4.07
AP4E1-207ENST00000561441 ADCY10Q96PN6 1610 aa40.48■■■■■ 4.07
AP4E1-207ENST00000561441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.47■■■■■ 4.07
AP4E1-207ENST00000561441 FAM50AQ14320 339 aaKnown RBP40.46■■■■■ 4.07
AP4E1-207ENST00000561441 KIF14Q15058 1648 aa40.43■■■■■ 4.06
AP4E1-207ENST00000561441 ZCCHC11Q5TAX3 1644 aaKnown RBP40.4■■■■■ 4.06
AP4E1-207ENST00000561441 MIA2Q96PC5 1412 aa40.38■■■■■ 4.05
AP4E1-207ENST00000561441 ITGAEP38570 1179 aa40.34■■■■■ 4.05
AP4E1-207ENST00000561441 PTPN23Q9H3S7 1636 aa40.33■■■■■ 4.05
AP4E1-207ENST00000561441 ABCC10Q5T3U5 1492 aa40.32■■■■■ 4.05
AP4E1-207ENST00000561441 TCOF1Q13428 1488 aaKnown RBP40.31■■■■■ 4.04
AP4E1-207ENST00000561441 GPATCH8Q9UKJ3 1502 aaKnown RBP40.28■■■■■ 4.04
AP4E1-207ENST00000561441 ITSN2Q9NZM3 1697 aa40.21■■■■■ 4.03
AP4E1-207ENST00000561441 RIMBP3CA6NJZ7 1639 aa40.2■■■■■ 4.03
AP4E1-207ENST00000561441 RIMBP3BA6NNM3 1639 aa40.2■■■■■ 4.03
AP4E1-207ENST00000561441 RIMBP3Q9UFD9 1639 aa40.2■■■■■ 4.03
AP4E1-207ENST00000561441 CFDP1Q9UEE9 299 aaPredicted RBP40.18■■■■■ 4.02
AP4E1-207ENST00000561441 KCNH8Q96L42 1107 aa40.13■■■■■ 4.02
AP4E1-207ENST00000561441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.13■■■■■ 4.01
AP4E1-207ENST00000561441 CDC42BPAQ5VT25 1732 aa40.12■■■■■ 4.01
AP4E1-207ENST00000561441 NPM1P06748 294 aaKnown RBP eCLIP40.11■■■■■ 4.01
AP4E1-207ENST00000561441 ZNF644Q9H582 1327 aaPredicted RBP40.11■■■■■ 4.01
AP4E1-207ENST00000561441 WDR7Q9Y4E6 1490 aa40.1■■■■■ 4.01
AP4E1-207ENST00000561441 HRCP23327 699 aa40.1■■■■■ 4.01
AP4E1-207ENST00000561441 PTPRKQ15262 1439 aa40.1■■■■■ 4.01
AP4E1-207ENST00000561441 TTC37Q6PGP7 1564 aa40.07■■■■■ 4.01
AP4E1-207ENST00000561441 CYB5RLQ6IPT4 315 aa40.07■■■■■ 4.01
AP4E1-207ENST00000561441 ASXL2Q76L83 1435 aa40.05■■■■■ 4
AP4E1-207ENST00000561441 CAMSAP2Q08AD1 1489 aa40.04■■■■■ 4
AP4E1-207ENST00000561441 ZNF777Q9ULD5 760 aaPredicted RBP40.01■■■■■ 4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms