RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, human

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-208	ENST00000561271	TRH	P20396	242 aa	Predicted RBP	29.64	■■■□□ 2.34
CDC42BPB-208	ENST00000561271	KIAA0586	Q9BVV6	1533 aa		29.62	■■■□□ 2.33
CDC42BPB-208	ENST00000561271	CARMIL1	Q5VZK9	1371 aa		29.61	■■■□□ 2.33
CDC42BPB-208	ENST00000561271	JPH4	Q96JJ6	628 aa		29.6	■■■□□ 2.33
CDC42BPB-208	ENST00000561271	IQGAP2	Q13576	1575 aa		29.53	■■■□□ 2.32
CDC42BPB-208	ENST00000561271	KIF13A	Q9H1H9	1805 aa		29.49	■■■□□ 2.31
CDC42BPB-208	ENST00000561271	CTTNBP2	Q8WZ74	1663 aa		29.49	■■■□□ 2.31
CDC42BPB-208	ENST00000561271	ADCY10	Q96PN6	1610 aa		29.46	■■■□□ 2.31
CDC42BPB-208	ENST00000561271	RAPGEF2	Q9Y4G8	1499 aa		29.44	■■■□□ 2.3
CDC42BPB-208	ENST00000561271	CARMIL2	Q6F5E8	1435 aa		29.29	■■■□□ 2.28
CDC42BPB-208	ENST00000561271	UGGT2	Q9NYU1	1516 aa		29.29	■■■□□ 2.28
CDC42BPB-208	ENST00000561271	MAPKBP1	O60336	1514 aa		29.28	■■■□□ 2.28
CDC42BPB-208	ENST00000561271	DISP1	Q96F81	1524 aa		29.28	■■■□□ 2.28
CDC42BPB-208	ENST00000561271	KIAA0556	O60303	1618 aa		29.27	■■■□□ 2.28
CDC42BPB-208	ENST00000561271	PRX	Q9BXM0	1461 aa		29.23	■■■□□ 2.27
CDC42BPB-208	ENST00000561271	PTPRG	P23470	1445 aa		29.23	■■■□□ 2.27
CDC42BPB-208	ENST00000561271	DIP2B	Q9P265	1576 aa		29.22	■■■□□ 2.27
CDC42BPB-208	ENST00000561271	TNIK	Q9UKE5	1360 aa		29.22	■■■□□ 2.27
CDC42BPB-208	ENST00000561271	TTBK1	Q5TCY1	1321 aa	Predicted RBP	29.2	■■■□□ 2.27
CDC42BPB-208	ENST00000561271	TSPOAP1	O95153	1857 aa		29.16	■■■□□ 2.26
CDC42BPB-208	ENST00000561271	NPM1	P06748	294 aa	Known RBP eCLIP	29.14	■■■□□ 2.26
CDC42BPB-208	ENST00000561271	ABCC10	Q5T3U5	1492 aa		29.14	■■■□□ 2.26
CDC42BPB-208	ENST00000561271	ABCC2	Q92887	1545 aa		29.11	■■■□□ 2.25
CDC42BPB-208	ENST00000561271	UHRF1BP1L	A0JNW5	1464 aa		29.08	■■■□□ 2.25
CDC42BPB-208	ENST00000561271	ZCCHC11	Q5TAX3	1644 aa	Known RBP	29.07	■■■□□ 2.24
CDC42BPB-208	ENST00000561271	UACA	Q9BZF9	1416 aa		29.05	■■■□□ 2.24
CDC42BPB-208	ENST00000561271	GOLGA3	Q08378	1498 aa		29.04	■■■□□ 2.24
CDC42BPB-208	ENST00000561271	EEA1	Q15075	1411 aa		29.02	■■■□□ 2.24
CDC42BPB-208	ENST00000561271	FAM69C	Q0P6D2	419 aa		29	■■■□□ 2.23
CDC42BPB-208	ENST00000561271	CSRNP3	Q8WYN3	585 aa		28.97	■■■□□ 2.23
CDC42BPB-208	ENST00000561271	KDM5B	Q9UGL1	1544 aa		28.97	■■■□□ 2.23
CDC42BPB-208	ENST00000561271	ASXL2	Q76L83	1435 aa		28.95	■■■□□ 2.23
CDC42BPB-208	ENST00000561271	ABCA8	O94911	1581 aa		28.94	■■■□□ 2.22
CDC42BPB-208	ENST00000561271	SAMD9	Q5K651	1589 aa		28.94	■■■□□ 2.22
CDC42BPB-208	ENST00000561271	PPRC1	Q5VV67	1664 aa	Known RBP	28.93	■■■□□ 2.22
CDC42BPB-208	ENST00000561271	PLB1	Q6P1J6	1458 aa		28.93	■■■□□ 2.22
CDC42BPB-208	ENST00000561271	KIF21B	O75037	1637 aa		28.93	■■■□□ 2.22
CDC42BPB-208	ENST00000561271	GLI2	P10070	1586 aa		28.89	■■■□□ 2.22
CDC42BPB-208	ENST00000561271	KDM6B	O15054	1643 aa		28.87	■■■□□ 2.21
CDC42BPB-208	ENST00000561271	FAM9A	Q8IZU1	332 aa	Predicted RBP	28.86	■■■□□ 2.21
CDC42BPB-208	ENST00000561271	MAP3K4	Q9Y6R4	1608 aa		28.85	■■■□□ 2.21
CDC42BPB-208	ENST00000561271	EPRS	P07814	1512 aa	Known RBP	28.8	■■■□□ 2.2
CDC42BPB-208	ENST00000561271	CHIC1	Q5VXU3	224 aa		28.79	■■■□□ 2.2
CDC42BPB-208	ENST00000561271	WDR7	Q9Y4E6	1490 aa		28.77	■■■□□ 2.2
CDC42BPB-208	ENST00000561271	RAPGEF6	Q8TEU7	1601 aa		28.76	■■■□□ 2.19
CDC42BPB-208	ENST00000561271	P3H3	Q8IVL6	736 aa		28.74	■■■□□ 2.19
CDC42BPB-208	ENST00000561271	CFAP43	Q8NDM7	1665 aa		28.72	■■■□□ 2.19
CDC42BPB-208	ENST00000561271	EFCAB5	A4FU69	1503 aa		28.67	■■■□□ 2.18
CDC42BPB-208	ENST00000561271	RANGAP1	P46060	587 aa	Predicted RBP	28.65	■■■□□ 2.18
CDC42BPB-208	ENST00000561271	FHOD3	Q2V2M9	1422 aa		28.65	■■■□□ 2.18
CDC42BPB-208	ENST00000561271	ATP10B	O94823	1461 aa		28.59	■■■□□ 2.17
CDC42BPB-208	ENST00000561271	TEX14	Q8IWB6	1497 aa		28.59	■■■□□ 2.17
CDC42BPB-208	ENST00000561271	ARID3C	A6NKF2	412 aa		28.59	■■■□□ 2.17
CDC42BPB-208	ENST00000561271	EHMT2	Q96KQ7	1210 aa		28.57	■■■□□ 2.16
CDC42BPB-208	ENST00000561271	NUP153	P49790	1475 aa	Known RBP	28.55	■■■□□ 2.16
CDC42BPB-208	ENST00000561271	ABCA9	Q8IUA7	1624 aa		28.51	■■■□□ 2.15
CDC42BPB-208	ENST00000561271	KCNH8	Q96L42	1107 aa		28.5	■■■□□ 2.15
CDC42BPB-208	ENST00000561271	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.49	■■■□□ 2.15
CDC42BPB-208	ENST00000561271	MAGI3	Q5TCQ9	1506 aa		28.48	■■■□□ 2.15
CDC42BPB-208	ENST00000561271	CD109	Q6YHK3	1445 aa		28.48	■■■□□ 2.15
CDC42BPB-208	ENST00000561271	UBTF	P17480	764 aa	Known RBP	28.46	■■■□□ 2.15
CDC42BPB-208	ENST00000561271	AEBP2	Q6ZN18	517 aa	Predicted RBP	28.46	■■■□□ 2.15
CDC42BPB-208	ENST00000561271	ARHGAP35	Q9NRY4	1499 aa		28.42	■■■□□ 2.14
CDC42BPB-208	ENST00000561271	LRRIQ1	Q96JM4	1722 aa		28.39	■■■□□ 2.14
CDC42BPB-208	ENST00000561271	HECW1	Q76N89	1606 aa		28.39	■■■□□ 2.13
CDC42BPB-208	ENST00000561271	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	28.37	■■■□□ 2.13
CDC42BPB-208	ENST00000561271	HNRNPUL2	Q1KMD3	747 aa	Known RBP	28.37	■■■□□ 2.13
CDC42BPB-208	ENST00000561271	CDK13	Q14004	1512 aa	Known RBP	28.37	■■■□□ 2.13
CDC42BPB-208	ENST00000561271	TTC37	Q6PGP7	1564 aa		28.31	■■■□□ 2.12
CDC42BPB-208	ENST00000561271	FMN1	Q68DA7	1419 aa		28.3	■■■□□ 2.12
CDC42BPB-208	ENST00000561271	ARAP3	Q8WWN8	1544 aa		28.26	■■■□□ 2.11
CDC42BPB-208	ENST00000561271	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	28.25	■■■□□ 2.11
CDC42BPB-208	ENST00000561271	PCF11	O94913	1555 aa	Known RBP	28.24	■■■□□ 2.11
CDC42BPB-208	ENST00000561271	CFAP74	Q9C0B2	1584 aa		28.23	■■■□□ 2.11
CDC42BPB-208	ENST00000561271	ADGRL1	O94910	1474 aa		28.21	■■■□□ 2.11
CDC42BPB-208	ENST00000561271	NEO1	Q92859	1461 aa		28.21	■■■□□ 2.11
CDC42BPB-208	ENST00000561271	MYO5C	Q9NQX4	1742 aa		28.21	■■■□□ 2.11
CDC42BPB-208	ENST00000561271	FRMPD1	Q5SYB0	1578 aa		28.2	■■■□□ 2.11
CDC42BPB-208	ENST00000561271	KDM4F	A0A1W2PPD8	638 aa		28.2	■■■□□ 2.1
CDC42BPB-208	ENST00000561271	PLEKHD1	A6NEE1	506 aa		28.19	■■■□□ 2.1
CDC42BPB-208	ENST00000561271	RICTOR	Q6R327	1708 aa		28.18	■■■□□ 2.1
CDC42BPB-208	ENST00000561271	KIF14	Q15058	1648 aa		28.18	■■■□□ 2.1
CDC42BPB-208	ENST00000561271	ATP1B4	Q9UN42	357 aa	Predicted RBP	28.14	■■■□□ 2.1
CDC42BPB-208	ENST00000561271	PHLDB1	Q86UU1	1377 aa		28.11	■■■□□ 2.09
CDC42BPB-208	ENST00000561271	FANCA	O15360	1455 aa		28.09	■■■□□ 2.09
CDC42BPB-208	ENST00000561271	CLIP1	P30622	1438 aa		28.06	■■■□□ 2.08
CDC42BPB-208	ENST00000561271	CASKIN1	Q8WXD9	1431 aa		28.05	■■■□□ 2.08
CDC42BPB-208	ENST00000561271	CCDC18	Q5T9S5	1454 aa		28.03	■■■□□ 2.08
CDC42BPB-208	ENST00000561271	ARHGEF40	Q8TER5	1519 aa		28.02	■■■□□ 2.08
CDC42BPB-208	ENST00000561271	FYCO1	Q9BQS8	1478 aa		28.02	■■■□□ 2.08
CDC42BPB-208	ENST00000561271	TRO	Q12816	1431 aa	Predicted RBP	28.02	■■■□□ 2.08
CDC42BPB-208	ENST00000561271	AKNA	Q7Z591	1439 aa		28.02	■■■□□ 2.08
CDC42BPB-208	ENST00000561271	RAPGEF3	O95398	923 aa		28.02	■■■□□ 2.08
CDC42BPB-208	ENST00000561271	CDC42BPB	Q9Y5S2	1711 aa		28.01	■■■□□ 2.07
CDC42BPB-208	ENST00000561271	DENND4B	O75064	1496 aa	Predicted RBP	27.99	■■■□□ 2.07
CDC42BPB-208	ENST00000561271	ZMYM4	Q5VZL5	1548 aa		27.97	■■■□□ 2.07
CDC42BPB-208	ENST00000561271	CDC42BPA	Q5VT25	1732 aa		27.97	■■■□□ 2.07
CDC42BPB-208	ENST00000561271	PREX2	Q70Z35	1606 aa		27.96	■■■□□ 2.07
CDC42BPB-208	ENST00000561271	PLCH2	O75038	1416 aa		27.96	■■■□□ 2.07
CDC42BPB-208	ENST00000561271	CDK11A	Q9UQ88	783 aa	Predicted RBP	27.96	■■■□□ 2.07

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