RNA–Protein interactions for RNA: ENST00000561106.1

SEMA6D-216, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-216ENST00000561106 SHROOM2Q13796 1616 aa24.36■■□□□ 1.49
SEMA6D-216ENST00000561106 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
SEMA6D-216ENST00000561106 KIAA0586Q9BVV6 1533 aa24.31■■□□□ 1.48
SEMA6D-216ENST00000561106 PRG4Q92954 1404 aaPredicted RBP24.29■■□□□ 1.48
SEMA6D-216ENST00000561106 RAPGEF2Q9Y4G8 1499 aa24.29■■□□□ 1.48
SEMA6D-216ENST00000561106 CSRNP3Q8WYN3 585 aa24.23■■□□□ 1.47
SEMA6D-216ENST00000561106 PRXQ9BXM0 1461 aa24.21■■□□□ 1.47
SEMA6D-216ENST00000561106 FAM9AQ8IZU1 332 aaPredicted RBP24.16■■□□□ 1.46
SEMA6D-216ENST00000561106 IQGAP2Q13576 1575 aa24.13■■□□□ 1.45
SEMA6D-216ENST00000561106 EEA1Q15075 1411 aa24.13■■□□□ 1.45
SEMA6D-216ENST00000561106 CARMIL2Q6F5E8 1435 aa24.02■■□□□ 1.44
SEMA6D-216ENST00000561106 CTTNBP2Q8WZ74 1663 aa24.02■■□□□ 1.44
SEMA6D-216ENST00000561106 DISP1Q96F81 1524 aa24.02■■□□□ 1.44
SEMA6D-216ENST00000561106 UGGT2Q9NYU1 1516 aa24.02■■□□□ 1.44
SEMA6D-216ENST00000561106 PTPRGP23470 1445 aa24■■□□□ 1.43
SEMA6D-216ENST00000561106 TRHP20396 242 aaPredicted RBP23.99■■□□□ 1.43
SEMA6D-216ENST00000561106 TTBK1Q5TCY1 1321 aaPredicted RBP23.99■■□□□ 1.43
SEMA6D-216ENST00000561106 TNIKQ9UKE5 1360 aa23.98■■□□□ 1.43
SEMA6D-216ENST00000561106 KIAA0556O60303 1618 aa23.91■■□□□ 1.42
SEMA6D-216ENST00000561106 ADCY10Q96PN6 1610 aa23.91■■□□□ 1.42
SEMA6D-216ENST00000561106 KIF21BO75037 1637 aa23.89■■□□□ 1.42
SEMA6D-216ENST00000561106 EHMT2Q96KQ7 1210 aa23.87■■□□□ 1.41
SEMA6D-216ENST00000561106 NPM1P06748 294 aaKnown RBP eCLIP23.86■■□□□ 1.41
SEMA6D-216ENST00000561106 GOLGA3Q08378 1498 aa23.85■■□□□ 1.41
SEMA6D-216ENST00000561106 P3H3Q8IVL6 736 aa23.83■■□□□ 1.41
SEMA6D-216ENST00000561106 UACAQ9BZF9 1416 aa23.82■■□□□ 1.4
SEMA6D-216ENST00000561106 RANGAP1P46060 587 aaPredicted RBP23.8■■□□□ 1.4
SEMA6D-216ENST00000561106 UBTFP17480 764 aaKnown RBP23.78■■□□□ 1.4
SEMA6D-216ENST00000561106 UHRF1BP1LA0JNW5 1464 aa23.78■■□□□ 1.4
SEMA6D-216ENST00000561106 ABCC2Q92887 1545 aa23.75■■□□□ 1.39
SEMA6D-216ENST00000561106 PLB1Q6P1J6 1458 aa23.73■■□□□ 1.39
SEMA6D-216ENST00000561106 MAPKBP1O60336 1514 aa23.73■■□□□ 1.39
SEMA6D-216ENST00000561106 SAMD9Q5K651 1589 aa23.73■■□□□ 1.39
SEMA6D-216ENST00000561106 KIF13AQ9H1H9 1805 aa23.69■■□□□ 1.38
SEMA6D-216ENST00000561106 ABCA8O94911 1581 aa23.68■■□□□ 1.38
SEMA6D-216ENST00000561106 KDM5BQ9UGL1 1544 aa23.68■■□□□ 1.38
SEMA6D-216ENST00000561106 FAM69CQ0P6D2 419 aa23.67■■□□□ 1.38
SEMA6D-216ENST00000561106 ABCC10Q5T3U5 1492 aa23.67■■□□□ 1.38
SEMA6D-216ENST00000561106 ASXL2Q76L83 1435 aa23.64■■□□□ 1.37
SEMA6D-216ENST00000561106 FHOD3Q2V2M9 1422 aa23.63■■□□□ 1.37
SEMA6D-216ENST00000561106 ZCCHC11Q5TAX3 1644 aaKnown RBP23.61■■□□□ 1.37
SEMA6D-216ENST00000561106 DIP2BQ9P265 1576 aa23.6■■□□□ 1.37
SEMA6D-216ENST00000561106 EFCAB5A4FU69 1503 aa23.58■■□□□ 1.36
SEMA6D-216ENST00000561106 ARID3CA6NKF2 412 aa23.56■■□□□ 1.36
SEMA6D-216ENST00000561106 ATP10BO94823 1461 aa23.54■■□□□ 1.36
SEMA6D-216ENST00000561106 ARHGAP35Q9NRY4 1499 aa23.54■■□□□ 1.36
SEMA6D-216ENST00000561106 RAPGEF6Q8TEU7 1601 aa23.51■■□□□ 1.35
SEMA6D-216ENST00000561106 EPRSP07814 1512 aaKnown RBP23.49■■□□□ 1.35
SEMA6D-216ENST00000561106 TSPOAP1O95153 1857 aa23.47■■□□□ 1.35
SEMA6D-216ENST00000561106 NUP153P49790 1475 aaKnown RBP23.47■■□□□ 1.35
SEMA6D-216ENST00000561106 WDR7Q9Y4E6 1490 aa23.47■■□□□ 1.35
SEMA6D-216ENST00000561106 GLI2P10070 1586 aa23.47■■□□□ 1.35
SEMA6D-216ENST00000561106 KCNH8Q96L42 1107 aa23.46■■□□□ 1.35
SEMA6D-216ENST00000561106 LOC105371045A0A1W2PR82 267 aa23.41■■□□□ 1.34
SEMA6D-216ENST00000561106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.41■■□□□ 1.34
SEMA6D-216ENST00000561106 HNRNPUL2Q1KMD3 747 aaKnown RBP23.41■■□□□ 1.34
SEMA6D-216ENST00000561106 FMN1Q68DA7 1419 aa23.39■■□□□ 1.33
SEMA6D-216ENST00000561106 PPRC1Q5VV67 1664 aaKnown RBP23.37■■□□□ 1.33
SEMA6D-216ENST00000561106 CLIP1P30622 1438 aa23.36■■□□□ 1.33
SEMA6D-216ENST00000561106 MAP3K4Q9Y6R4 1608 aa23.36■■□□□ 1.33
SEMA6D-216ENST00000561106 ATP1B4Q9UN42 357 aaPredicted RBP23.35■■□□□ 1.33
SEMA6D-216ENST00000561106 PLEKHD1A6NEE1 506 aa23.32■■□□□ 1.32
SEMA6D-216ENST00000561106 CD109Q6YHK3 1445 aa23.3■■□□□ 1.32
SEMA6D-216ENST00000561106 CDK13Q14004 1512 aaKnown RBP23.29■■□□□ 1.32
SEMA6D-216ENST00000561106 CFAP43Q8NDM7 1665 aa23.26■■□□□ 1.31
SEMA6D-216ENST00000561106 HECW1Q76N89 1606 aa23.26■■□□□ 1.31
SEMA6D-216ENST00000561106 CEP162Q5TB80 1403 aa23.24■■□□□ 1.31
SEMA6D-216ENST00000561106 CASKIN1Q8WXD9 1431 aa23.24■■□□□ 1.31
SEMA6D-216ENST00000561106 MAGI3Q5TCQ9 1506 aa23.23■■□□□ 1.31
SEMA6D-216ENST00000561106 COL17A1Q9UMD9 1497 aaPredicted RBP23.23■■□□□ 1.31
SEMA6D-216ENST00000561106 KDM6BO15054 1643 aa23.22■■□□□ 1.31
SEMA6D-216ENST00000561106 LRRIQ1Q96JM4 1722 aa23.22■■□□□ 1.31
SEMA6D-216ENST00000561106 TEX14Q8IWB6 1497 aa23.22■■□□□ 1.31
SEMA6D-216ENST00000561106 ABCA9Q8IUA7 1624 aa23.22■■□□□ 1.31
SEMA6D-216ENST00000561106 PCF11O94913 1555 aaKnown RBP23.2■■□□□ 1.3
SEMA6D-216ENST00000561106 CDK11AQ9UQ88 783 aaPredicted RBP23.16■■□□□ 1.3
SEMA6D-216ENST00000561106 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.13■■□□□ 1.29
SEMA6D-216ENST00000561106 FYCO1Q9BQS8 1478 aa23.13■■□□□ 1.29
SEMA6D-216ENST00000561106 TROQ12816 1431 aaPredicted RBP23.1■■□□□ 1.29
SEMA6D-216ENST00000561106 CCDC18Q5T9S5 1454 aa23.09■■□□□ 1.29
SEMA6D-216ENST00000561106 TTC37Q6PGP7 1564 aa23.08■■□□□ 1.29
SEMA6D-216ENST00000561106 AEBP2Q6ZN18 517 aaPredicted RBP23.05■■□□□ 1.28
SEMA6D-216ENST00000561106 KIF14Q15058 1648 aa23.04■■□□□ 1.28
SEMA6D-216ENST00000561106 PHLDB1Q86UU1 1377 aa23.04■■□□□ 1.28
SEMA6D-216ENST00000561106 ARAP3Q8WWN8 1544 aa23.04■■□□□ 1.28
SEMA6D-216ENST00000561106 NEO1Q92859 1461 aa23.04■■□□□ 1.28
SEMA6D-216ENST00000561106 PLCH2O75038 1416 aa23.01■■□□□ 1.27
SEMA6D-216ENST00000561106 RAPGEF3O95398 923 aa22.99■■□□□ 1.27
SEMA6D-216ENST00000561106 FANCAO15360 1455 aa22.98■■□□□ 1.27
SEMA6D-216ENST00000561106 AKNAQ7Z591 1439 aa22.98■■□□□ 1.27
SEMA6D-216ENST00000561106 VPS8Q8N3P4 1428 aa22.95■■□□□ 1.26
SEMA6D-216ENST00000561106 MYO5CQ9NQX4 1742 aa22.94■■□□□ 1.26
SEMA6D-216ENST00000561106 EFCAB2Q5VUJ9 269 aa22.94■■□□□ 1.26
SEMA6D-216ENST00000561106 MTUS2Q5JR59 1369 aa22.89■■□□□ 1.26
SEMA6D-216ENST00000561106 CFAP74Q9C0B2 1584 aa22.89■■□□□ 1.26
SEMA6D-216ENST00000561106 CDC42BPBQ9Y5S2 1711 aa22.89■■□□□ 1.26
SEMA6D-216ENST00000561106 DENND4BO75064 1496 aaPredicted RBP22.89■■□□□ 1.25
SEMA6D-216ENST00000561106 FRMPD1Q5SYB0 1578 aa22.88■■□□□ 1.25
SEMA6D-216ENST00000561106 SCAPERQ9BY12 1400 aa22.87■■□□□ 1.25
SEMA6D-216ENST00000561106 KDM4FA0A1W2PPD8 638 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms