RNA–Protein interactions for RNA: ENST00000561091.1

SHF-209, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5

Gene SHF, Length 577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-209ENST00000561091 CLASP1Q7Z460 1538 aa26.15■■□□□ 1.78
SHF-209ENST00000561091 KIAA0586Q9BVV6 1533 aa26.08■■□□□ 1.77
SHF-209ENST00000561091 IQGAP2Q13576 1575 aa26.07■■□□□ 1.76
SHF-209ENST00000561091 UBTFP17480 764 aaKnown RBP26.06■■□□□ 1.76
SHF-209ENST00000561091 LOC105371045A0A1W2PR82 267 aa26.04■■□□□ 1.76
SHF-209ENST00000561091 SHROOM2Q13796 1616 aa26.01■■□□□ 1.75
SHF-209ENST00000561091 JPH4Q96JJ6 628 aa25.93■■□□□ 1.74
SHF-209ENST00000561091 UGGT2Q9NYU1 1516 aa25.91■■□□□ 1.74
SHF-209ENST00000561091 TNIKQ9UKE5 1360 aa25.91■■□□□ 1.74
SHF-209ENST00000561091 RANGAP1P46060 587 aaPredicted RBP25.9■■□□□ 1.74
SHF-209ENST00000561091 ERCC6L2Q5T890 1561 aa25.9■■□□□ 1.74
SHF-209ENST00000561091 PRG4Q92954 1404 aaPredicted RBP25.88■■□□□ 1.73
SHF-209ENST00000561091 ARHGEF11O15085 1522 aa25.83■■□□□ 1.73
SHF-209ENST00000561091 RIMBP3CA6NJZ7 1639 aa25.83■■□□□ 1.73
SHF-209ENST00000561091 RIMBP3BA6NNM3 1639 aa25.83■■□□□ 1.73
SHF-209ENST00000561091 RIMBP3Q9UFD9 1639 aa25.83■■□□□ 1.73
SHF-209ENST00000561091 DISP1Q96F81 1524 aa25.83■■□□□ 1.72
SHF-209ENST00000561091 SAMD9Q5K651 1589 aa25.82■■□□□ 1.72
SHF-209ENST00000561091 KIAA0556O60303 1618 aa25.81■■□□□ 1.72
SHF-209ENST00000561091 DNAJC5Q9H3Z4 198 aa25.79■■□□□ 1.72
SHF-209ENST00000561091 CARMIL2Q6F5E8 1435 aa25.77■■□□□ 1.72
SHF-209ENST00000561091 EFCAB5A4FU69 1503 aa25.75■■□□□ 1.71
SHF-209ENST00000561091 CEP162Q5TB80 1403 aa25.74■■□□□ 1.71
SHF-209ENST00000561091 P3H3Q8IVL6 736 aa25.74■■□□□ 1.71
SHF-209ENST00000561091 ARHGAP35Q9NRY4 1499 aa25.72■■□□□ 1.71
SHF-209ENST00000561091 CLIP1P30622 1438 aa25.72■■□□□ 1.71
SHF-209ENST00000561091 FHOD3Q2V2M9 1422 aa25.68■■□□□ 1.7
SHF-209ENST00000561091 TTBK1Q5TCY1 1321 aaPredicted RBP25.67■■□□□ 1.7
SHF-209ENST00000561091 ARAP1Q96P48 1450 aa25.67■■□□□ 1.7
SHF-209ENST00000561091 PTPRGP23470 1445 aa25.61■■□□□ 1.69
SHF-209ENST00000561091 CYB5RLQ6IPT4 315 aa25.54■■□□□ 1.68
SHF-209ENST00000561091 PLB1Q6P1J6 1458 aa25.5■■□□□ 1.67
SHF-209ENST00000561091 ABCA8O94911 1581 aa25.49■■□□□ 1.67
SHF-209ENST00000561091 RAPGEF6Q8TEU7 1601 aa25.48■■□□□ 1.67
SHF-209ENST00000561091 ADCY10Q96PN6 1610 aa25.48■■□□□ 1.67
SHF-209ENST00000561091 FMN1Q68DA7 1419 aa25.47■■□□□ 1.67
SHF-209ENST00000561091 UACAQ9BZF9 1416 aa25.46■■□□□ 1.67
SHF-209ENST00000561091 PCF11O94913 1555 aaKnown RBP25.44■■□□□ 1.66
SHF-209ENST00000561091 ABCC2Q92887 1545 aa25.43■■□□□ 1.66
SHF-209ENST00000561091 UHRF1BP1LA0JNW5 1464 aa25.4■■□□□ 1.66
SHF-209ENST00000561091 VPS8Q8N3P4 1428 aa25.37■■□□□ 1.65
SHF-209ENST00000561091 LRRIQ1Q96JM4 1722 aa25.37■■□□□ 1.65
SHF-209ENST00000561091 HECW1Q76N89 1606 aa25.37■■□□□ 1.65
SHF-209ENST00000561091 CASKIN1Q8WXD9 1431 aa25.36■■□□□ 1.65
SHF-209ENST00000561091 NUP153P49790 1475 aaKnown RBP25.35■■□□□ 1.65
SHF-209ENST00000561091 ATP1B4Q9UN42 357 aaPredicted RBP25.34■■□□□ 1.65
SHF-209ENST00000561091 FYCO1Q9BQS8 1478 aa25.34■■□□□ 1.65
SHF-209ENST00000561091 ARID3CA6NKF2 412 aa25.33■■□□□ 1.65
SHF-209ENST00000561091 ZCCHC11Q5TAX3 1644 aaKnown RBP25.33■■□□□ 1.65
SHF-209ENST00000561091 KDM5BQ9UGL1 1544 aa25.29■■□□□ 1.64
SHF-209ENST00000561091 CDK13Q14004 1512 aaKnown RBP25.27■■□□□ 1.64
SHF-209ENST00000561091 ATP10BO94823 1461 aa25.27■■□□□ 1.64
SHF-209ENST00000561091 EPRSP07814 1512 aaKnown RBP25.26■■□□□ 1.63
SHF-209ENST00000561091 NPM1P06748 294 aaKnown RBP eCLIP25.22■■□□□ 1.63
SHF-209ENST00000561091 CCDC18Q5T9S5 1454 aa25.2■■□□□ 1.62
SHF-209ENST00000561091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.19■■□□□ 1.62
SHF-209ENST00000561091 HNRNPUL2Q1KMD3 747 aaKnown RBP25.19■■□□□ 1.62
SHF-209ENST00000561091 CFAP43Q8NDM7 1665 aa25.19■■□□□ 1.62
SHF-209ENST00000561091 TIAM1Q13009 1591 aa25.14■■□□□ 1.62
SHF-209ENST00000561091 MAPKBP1O60336 1514 aa25.14■■□□□ 1.62
SHF-209ENST00000561091 ASXL2Q76L83 1435 aa25.12■■□□□ 1.61
SHF-209ENST00000561091 MAGI3Q5TCQ9 1506 aa25.1■■□□□ 1.61
SHF-209ENST00000561091 WDR7Q9Y4E6 1490 aa25.08■■□□□ 1.6
SHF-209ENST00000561091 MAP3K1Q13233 1512 aa25.07■■□□□ 1.6
SHF-209ENST00000561091 APLP2Q06481 763 aa25.05■■□□□ 1.6
SHF-209ENST00000561091 PLEKHD1A6NEE1 506 aa25.04■■□□□ 1.6
SHF-209ENST00000561091 CDK11AQ9UQ88 783 aaPredicted RBP25.02■■□□□ 1.6
SHF-209ENST00000561091 TROQ12816 1431 aaPredicted RBP25.01■■□□□ 1.59
SHF-209ENST00000561091 KCNH8Q96L42 1107 aa25■■□□□ 1.59
SHF-209ENST00000561091 KIF14Q15058 1648 aa25■■□□□ 1.59
SHF-209ENST00000561091 KIF13AQ9H1H9 1805 aa25■■□□□ 1.59
SHF-209ENST00000561091 MTUS2Q5JR59 1369 aa24.99■■□□□ 1.59
SHF-209ENST00000561091 KANK4Q5T7N3 995 aaPredicted RBP24.99■■□□□ 1.59
SHF-209ENST00000561091 LRRC9Q6ZRR7 1453 aa24.99■■□□□ 1.59
SHF-209ENST00000561091 EHBP1L1Q8N3D4 1523 aa24.99■■□□□ 1.59
SHF-209ENST00000561091 DIP2BQ9P265 1576 aa24.99■■□□□ 1.59
SHF-209ENST00000561091 ABCC10Q5T3U5 1492 aa24.96■■□□□ 1.59
SHF-209ENST00000561091 SUPT6HQ7KZ85 1726 aaKnown RBP24.92■■□□□ 1.58
SHF-209ENST00000561091 PPARGC1BQ86YN6 1023 aaKnown RBP24.92■■□□□ 1.58
SHF-209ENST00000561091 TTC37Q6PGP7 1564 aa24.92■■□□□ 1.58
SHF-209ENST00000561091 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.91■■□□□ 1.58
SHF-209ENST00000561091 GLI2P10070 1586 aa24.91■■□□□ 1.58
SHF-209ENST00000561091 ABCA9Q8IUA7 1624 aa24.9■■□□□ 1.58
SHF-209ENST00000561091 FAM69CQ0P6D2 419 aa24.88■■□□□ 1.57
SHF-209ENST00000561091 MAP3K4Q9Y6R4 1608 aa24.87■■□□□ 1.57
SHF-209ENST00000561091 TRHP20396 242 aaPredicted RBP24.86■■□□□ 1.57
SHF-209ENST00000561091 TSPOAP1O95153 1857 aa24.85■■□□□ 1.57
SHF-209ENST00000561091 NCOA2Q15596 1464 aa24.84■■□□□ 1.57
SHF-209ENST00000561091 MYO5CQ9NQX4 1742 aa24.84■■□□□ 1.57
SHF-209ENST00000561091 CDC42BPAQ5VT25 1732 aa24.83■■□□□ 1.57
SHF-209ENST00000561091 PPRC1Q5VV67 1664 aaKnown RBP24.78■■□□□ 1.56
SHF-209ENST00000561091 CD109Q6YHK3 1445 aa24.78■■□□□ 1.56
SHF-209ENST00000561091 CDC42BPBQ9Y5S2 1711 aa24.78■■□□□ 1.56
SHF-209ENST00000561091 PREX2Q70Z35 1606 aa24.78■■□□□ 1.56
SHF-209ENST00000561091 ITSN2Q9NZM3 1697 aa24.76■■□□□ 1.55
SHF-209ENST00000561091 CCNB3Q8WWL7 1395 aa24.75■■□□□ 1.55
SHF-209ENST00000561091 GPATCH8Q9UKJ3 1502 aaKnown RBP24.74■■□□□ 1.55
SHF-209ENST00000561091 PLCH2O75038 1416 aa24.71■■□□□ 1.55
SHF-209ENST00000561091 PHLDB1Q86UU1 1377 aa24.71■■□□□ 1.55
SHF-209ENST00000561091 ARHGAP5Q13017 1502 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms