RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-214ENST00000560987 GRIN2AQ12879 1464 aa15.13■□□□□ 0.01
SNRPA1-214ENST00000560987 ADAMTS12P58397 1594 aa15.12■□□□□ 0.01
SNRPA1-214ENST00000560987 CARMIL1Q5VZK9 1371 aa15.11■□□□□ 0.01
SNRPA1-214ENST00000560987 RUSC2Q8N2Y8 1516 aa15.09■□□□□ 0.01
SNRPA1-214ENST00000560987 FAM9AQ8IZU1 332 aaPredicted RBP15.06■□□□□ 0
SNRPA1-214ENST00000560987 JPH4Q96JJ6 628 aa15.05■□□□□ -0
SNRPA1-214ENST00000560987 ARAP1Q96P48 1450 aa15.05■□□□□ -0
SNRPA1-214ENST00000560987 CLASP1Q7Z460 1538 aa15.05■□□□□ -0
SNRPA1-214ENST00000560987 CUL7Q14999 1698 aa15.04■□□□□ -0
SNRPA1-214ENST00000560987 CEP170Q5SW79 1584 aa15.03■□□□□ -0
SNRPA1-214ENST00000560987 NUP160Q12769 1436 aa15.02■□□□□ -0
SNRPA1-214ENST00000560987 CSRNP3Q8WYN3 585 aa15.01□□□□□ -0.01
SNRPA1-214ENST00000560987 RAPGEF2Q9Y4G8 1499 aa14.97□□□□□ -0.01
SNRPA1-214ENST00000560987 TTBK1Q5TCY1 1321 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-214ENST00000560987 PRG4Q92954 1404 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-214ENST00000560987 KIAA0586Q9BVV6 1533 aa14.94□□□□□ -0.02
SNRPA1-214ENST00000560987 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
SNRPA1-214ENST00000560987 EEA1Q15075 1411 aa14.91□□□□□ -0.02
SNRPA1-214ENST00000560987 ERCC6L2Q5T890 1561 aa14.9□□□□□ -0.02
SNRPA1-214ENST00000560987 SHROOM2Q13796 1616 aa14.88□□□□□ -0.03
SNRPA1-214ENST00000560987 RANGAP1P46060 587 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-214ENST00000560987 PRXQ9BXM0 1461 aa14.86□□□□□ -0.03
SNRPA1-214ENST00000560987 CARMIL2Q6F5E8 1435 aa14.85□□□□□ -0.03
SNRPA1-214ENST00000560987 NPM1P06748 294 aaKnown RBP eCLIP14.85□□□□□ -0.03
SNRPA1-214ENST00000560987 IQGAP2Q13576 1575 aa14.83□□□□□ -0.04
SNRPA1-214ENST00000560987 UBTFP17480 764 aaKnown RBP14.83□□□□□ -0.04
SNRPA1-214ENST00000560987 PTPRGP23470 1445 aa14.81□□□□□ -0.04
SNRPA1-214ENST00000560987 P3H3Q8IVL6 736 aa14.8□□□□□ -0.04
SNRPA1-214ENST00000560987 TNIKQ9UKE5 1360 aa14.78□□□□□ -0.04
SNRPA1-214ENST00000560987 CTTNBP2Q8WZ74 1663 aa14.76□□□□□ -0.05
SNRPA1-214ENST00000560987 UGGT2Q9NYU1 1516 aa14.73□□□□□ -0.05
SNRPA1-214ENST00000560987 GOLGA3Q08378 1498 aa14.72□□□□□ -0.05
SNRPA1-214ENST00000560987 DISP1Q96F81 1524 aa14.71□□□□□ -0.05
SNRPA1-214ENST00000560987 CACNB1Q02641 598 aaPredicted RBP14.7□□□□□ -0.06
SNRPA1-214ENST00000560987 KIF21BO75037 1637 aa14.69□□□□□ -0.06
SNRPA1-214ENST00000560987 FAM69CQ0P6D2 419 aa14.67□□□□□ -0.06
SNRPA1-214ENST00000560987 KIAA0556O60303 1618 aa14.66□□□□□ -0.06
SNRPA1-214ENST00000560987 UACAQ9BZF9 1416 aa14.66□□□□□ -0.06
SNRPA1-214ENST00000560987 ADCY10Q96PN6 1610 aa14.63□□□□□ -0.07
SNRPA1-214ENST00000560987 ARID3CA6NKF2 412 aa14.63□□□□□ -0.07
SNRPA1-214ENST00000560987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-214ENST00000560987 HNRNPUL2Q1KMD3 747 aaKnown RBP14.61□□□□□ -0.07
SNRPA1-214ENST00000560987 ATP1B4Q9UN42 357 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-214ENST00000560987 PLB1Q6P1J6 1458 aa14.58□□□□□ -0.08
SNRPA1-214ENST00000560987 ABCC2Q92887 1545 aa14.58□□□□□ -0.08
SNRPA1-214ENST00000560987 DMRT2Q9Y5R5 561 aa14.58□□□□□ -0.08
SNRPA1-214ENST00000560987 UHRF1BP1LA0JNW5 1464 aa14.57□□□□□ -0.08
SNRPA1-214ENST00000560987 LOC105371045A0A1W2PR82 267 aa14.57□□□□□ -0.08
SNRPA1-214ENST00000560987 FHOD3Q2V2M9 1422 aa14.57□□□□□ -0.08
SNRPA1-214ENST00000560987 ABCC10Q5T3U5 1492 aa14.57□□□□□ -0.08
SNRPA1-214ENST00000560987 KCNH8Q96L42 1107 aa14.56□□□□□ -0.08
SNRPA1-214ENST00000560987 MAPKBP1O60336 1514 aa14.54□□□□□ -0.08
SNRPA1-214ENST00000560987 SAMD9Q5K651 1589 aa14.54□□□□□ -0.08
SNRPA1-214ENST00000560987 ASXL2Q76L83 1435 aa14.52□□□□□ -0.08
SNRPA1-214ENST00000560987 MAPK8IP2Q13387 824 aaPredicted RBP14.52□□□□□ -0.09
SNRPA1-214ENST00000560987 ABCA8O94911 1581 aa14.51□□□□□ -0.09
SNRPA1-214ENST00000560987 EFCAB5A4FU69 1503 aa14.51□□□□□ -0.09
SNRPA1-214ENST00000560987 KDM5BQ9UGL1 1544 aa14.51□□□□□ -0.09
SNRPA1-214ENST00000560987 ZCCHC11Q5TAX3 1644 aaKnown RBP14.49□□□□□ -0.09
SNRPA1-214ENST00000560987 KIF13AQ9H1H9 1805 aa14.49□□□□□ -0.09
SNRPA1-214ENST00000560987 ATP10BO94823 1461 aa14.47□□□□□ -0.09
SNRPA1-214ENST00000560987 ARHGAP35Q9NRY4 1499 aa14.47□□□□□ -0.09
SNRPA1-214ENST00000560987 PLEKHD1A6NEE1 506 aa14.47□□□□□ -0.09
SNRPA1-214ENST00000560987 RAPGEF6Q8TEU7 1601 aa14.47□□□□□ -0.09
SNRPA1-214ENST00000560987 CLIP1P30622 1438 aa14.45□□□□□ -0.1
SNRPA1-214ENST00000560987 FMN1Q68DA7 1419 aa14.45□□□□□ -0.1
SNRPA1-214ENST00000560987 DIP2BQ9P265 1576 aa14.44□□□□□ -0.1
SNRPA1-214ENST00000560987 TSPOAP1O95153 1857 aa14.44□□□□□ -0.1
SNRPA1-214ENST00000560987 WDR7Q9Y4E6 1490 aa14.42□□□□□ -0.1
SNRPA1-214ENST00000560987 EPRSP07814 1512 aaKnown RBP14.41□□□□□ -0.1
SNRPA1-214ENST00000560987 CDK11AQ9UQ88 783 aaPredicted RBP14.41□□□□□ -0.1
SNRPA1-214ENST00000560987 NUP153P49790 1475 aaKnown RBP14.4□□□□□ -0.1
SNRPA1-214ENST00000560987 KDM6BO15054 1643 aa14.37□□□□□ -0.11
SNRPA1-214ENST00000560987 GLI2P10070 1586 aa14.36□□□□□ -0.11
SNRPA1-214ENST00000560987 CEP162Q5TB80 1403 aa14.36□□□□□ -0.11
SNRPA1-214ENST00000560987 CD109Q6YHK3 1445 aa14.36□□□□□ -0.11
SNRPA1-214ENST00000560987 CDK13Q14004 1512 aaKnown RBP14.33□□□□□ -0.12
SNRPA1-214ENST00000560987 HECW1Q76N89 1606 aa14.33□□□□□ -0.12
SNRPA1-214ENST00000560987 TEX14Q8IWB6 1497 aa14.32□□□□□ -0.12
SNRPA1-214ENST00000560987 CASKIN1Q8WXD9 1431 aa14.32□□□□□ -0.12
SNRPA1-214ENST00000560987 MAP3K4Q9Y6R4 1608 aa14.29□□□□□ -0.12
SNRPA1-214ENST00000560987 CFAP43Q8NDM7 1665 aa14.27□□□□□ -0.12
SNRPA1-214ENST00000560987 SCAF1Q9H7N4 1312 aaKnown RBP14.27□□□□□ -0.12
SNRPA1-214ENST00000560987 KDM4FA0A1W2PPD8 638 aa14.27□□□□□ -0.13
SNRPA1-214ENST00000560987 PCF11O94913 1555 aaKnown RBP14.26□□□□□ -0.13
SNRPA1-214ENST00000560987 FYCO1Q9BQS8 1478 aa14.25□□□□□ -0.13
SNRPA1-214ENST00000560987 MAGI3Q5TCQ9 1506 aa14.25□□□□□ -0.13
SNRPA1-214ENST00000560987 CCDC18Q5T9S5 1454 aa14.25□□□□□ -0.13
SNRPA1-214ENST00000560987 PPRC1Q5VV67 1664 aaKnown RBP14.24□□□□□ -0.13
SNRPA1-214ENST00000560987 ABCA9Q8IUA7 1624 aa14.23□□□□□ -0.13
SNRPA1-214ENST00000560987 APLP2Q06481 763 aa14.23□□□□□ -0.13
SNRPA1-214ENST00000560987 TROQ12816 1431 aaPredicted RBP14.23□□□□□ -0.13
SNRPA1-214ENST00000560987 LRRIQ1Q96JM4 1722 aa14.22□□□□□ -0.13
SNRPA1-214ENST00000560987 EFCAB2Q5VUJ9 269 aa14.21□□□□□ -0.13
SNRPA1-214ENST00000560987 MTUS2Q5JR59 1369 aa14.21□□□□□ -0.14
SNRPA1-214ENST00000560987 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.2□□□□□ -0.14
SNRPA1-214ENST00000560987 PHLDB1Q86UU1 1377 aa14.2□□□□□ -0.14
SNRPA1-214ENST00000560987 RAPGEF3O95398 923 aa14.19□□□□□ -0.14
SNRPA1-214ENST00000560987 COL17A1Q9UMD9 1497 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms