RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 ADCY10Q96PN6 1610 aa18.98■□□□□ 0.63
TPM1-227ENST00000560970 MAPKBP1O60336 1514 aa18.95■□□□□ 0.62
TPM1-227ENST00000560970 DIP2BQ9P265 1576 aa18.93■□□□□ 0.62
TPM1-227ENST00000560970 KIF27Q86VH2 1401 aa18.91■□□□□ 0.62
TPM1-227ENST00000560970 KIAA0586Q9BVV6 1533 aa18.9■□□□□ 0.62
TPM1-227ENST00000560970 JPH4Q96JJ6 628 aa18.86■□□□□ 0.61
TPM1-227ENST00000560970 ABCC10Q5T3U5 1492 aa18.85■□□□□ 0.61
TPM1-227ENST00000560970 IQGAP2Q13576 1575 aa18.84■□□□□ 0.61
TPM1-227ENST00000560970 TSPOAP1O95153 1857 aa18.82■□□□□ 0.6
TPM1-227ENST00000560970 IGF1RP08069 1367 aa18.8■□□□□ 0.6
TPM1-227ENST00000560970 KDM6BO15054 1643 aa18.78■□□□□ 0.6
TPM1-227ENST00000560970 AEBP2Q6ZN18 517 aaPredicted RBP18.77■□□□□ 0.6
TPM1-227ENST00000560970 CTTNBP2Q8WZ74 1663 aa18.76■□□□□ 0.59
TPM1-227ENST00000560970 CARMIL1Q5VZK9 1371 aa18.71■□□□□ 0.59
TPM1-227ENST00000560970 PPRC1Q5VV67 1664 aaKnown RBP18.7■□□□□ 0.58
TPM1-227ENST00000560970 CARMIL2Q6F5E8 1435 aa18.69■□□□□ 0.58
TPM1-227ENST00000560970 NPM1P06748 294 aaKnown RBP eCLIP18.69■□□□□ 0.58
TPM1-227ENST00000560970 ABCC2Q92887 1545 aa18.69■□□□□ 0.58
TPM1-227ENST00000560970 KIAA0556O60303 1618 aa18.68■□□□□ 0.58
TPM1-227ENST00000560970 FAM69CQ0P6D2 419 aa18.66■□□□□ 0.58
TPM1-227ENST00000560970 TNIKQ9UKE5 1360 aa18.66■□□□□ 0.58
TPM1-227ENST00000560970 DISP1Q96F81 1524 aa18.65■□□□□ 0.58
TPM1-227ENST00000560970 UGGT2Q9NYU1 1516 aa18.65■□□□□ 0.58
TPM1-227ENST00000560970 GLI2P10070 1586 aa18.65■□□□□ 0.58
TPM1-227ENST00000560970 ZCCHC11Q5TAX3 1644 aaKnown RBP18.65■□□□□ 0.58
TPM1-227ENST00000560970 PTPRGP23470 1445 aa18.65■□□□□ 0.58
TPM1-227ENST00000560970 UHRF1BP1LA0JNW5 1464 aa18.65■□□□□ 0.58
TPM1-227ENST00000560970 MAP3K4Q9Y6R4 1608 aa18.63■□□□□ 0.57
TPM1-227ENST00000560970 RAPGEF2Q9Y4G8 1499 aa18.62■□□□□ 0.57
TPM1-227ENST00000560970 PLB1Q6P1J6 1458 aa18.59■□□□□ 0.57
TPM1-227ENST00000560970 ASXL2Q76L83 1435 aa18.58■□□□□ 0.57
TPM1-227ENST00000560970 UACAQ9BZF9 1416 aa18.57■□□□□ 0.56
TPM1-227ENST00000560970 KDM5BQ9UGL1 1544 aa18.56■□□□□ 0.56
TPM1-227ENST00000560970 EPRSP07814 1512 aaKnown RBP18.51■□□□□ 0.55
TPM1-227ENST00000560970 TTBK1Q5TCY1 1321 aaPredicted RBP18.5■□□□□ 0.55
TPM1-227ENST00000560970 CFAP43Q8NDM7 1665 aa18.5■□□□□ 0.55
TPM1-227ENST00000560970 CHIC1Q5VXU3 224 aa18.49■□□□□ 0.55
TPM1-227ENST00000560970 TEX14Q8IWB6 1497 aa18.47■□□□□ 0.55
TPM1-227ENST00000560970 ABCA8O94911 1581 aa18.47■□□□□ 0.55
TPM1-227ENST00000560970 GOLGA3Q08378 1498 aa18.46■□□□□ 0.55
TPM1-227ENST00000560970 WDR7Q9Y4E6 1490 aa18.46■□□□□ 0.54
TPM1-227ENST00000560970 PRXQ9BXM0 1461 aa18.4■□□□□ 0.54
TPM1-227ENST00000560970 ADGRL1O94910 1474 aa18.39■□□□□ 0.53
TPM1-227ENST00000560970 SAMD9Q5K651 1589 aa18.36■□□□□ 0.53
TPM1-227ENST00000560970 COL17A1Q9UMD9 1497 aaPredicted RBP18.34■□□□□ 0.53
TPM1-227ENST00000560970 KDM4FA0A1W2PPD8 638 aa18.34■□□□□ 0.53
TPM1-227ENST00000560970 MAGI3Q5TCQ9 1506 aa18.33■□□□□ 0.52
TPM1-227ENST00000560970 RAPGEF6Q8TEU7 1601 aa18.3■□□□□ 0.52
TPM1-227ENST00000560970 KIF21BO75037 1637 aa18.29■□□□□ 0.52
TPM1-227ENST00000560970 ABCA9Q8IUA7 1624 aa18.29■□□□□ 0.52
TPM1-227ENST00000560970 CD109Q6YHK3 1445 aa18.24■□□□□ 0.51
TPM1-227ENST00000560970 HECW2Q9P2P5 1572 aa18.22■□□□□ 0.51
TPM1-227ENST00000560970 ARAP3Q8WWN8 1544 aa18.18■□□□□ 0.5
TPM1-227ENST00000560970 EEA1Q15075 1411 aa18.17■□□□□ 0.5
TPM1-227ENST00000560970 ATP10BO94823 1461 aa18.17■□□□□ 0.5
TPM1-227ENST00000560970 EFCAB5A4FU69 1503 aa18.15■□□□□ 0.5
TPM1-227ENST00000560970 FRMPD1Q5SYB0 1578 aa18.15■□□□□ 0.5
TPM1-227ENST00000560970 CFAP74Q9C0B2 1584 aa18.15■□□□□ 0.5
TPM1-227ENST00000560970 NUP153P49790 1475 aaKnown RBP18.13■□□□□ 0.49
TPM1-227ENST00000560970 RICTORQ6R327 1708 aa18.11■□□□□ 0.49
TPM1-227ENST00000560970 ADAMTSL3P82987 1691 aa18.1■□□□□ 0.49
TPM1-227ENST00000560970 NEO1Q92859 1461 aa18.1■□□□□ 0.49
TPM1-227ENST00000560970 KCNH8Q96L42 1107 aa18.1■□□□□ 0.49
TPM1-227ENST00000560970 ARHGEF40Q8TER5 1519 aa18.09■□□□□ 0.49
TPM1-227ENST00000560970 FAM9AQ8IZU1 332 aaPredicted RBP18.08■□□□□ 0.48
TPM1-227ENST00000560970 BCORL1Q5H9F3 1711 aa18.08■□□□□ 0.48
TPM1-227ENST00000560970 FHOD3Q2V2M9 1422 aa18.07■□□□□ 0.48
TPM1-227ENST00000560970 PHLDB1Q86UU1 1377 aa18.06■□□□□ 0.48
TPM1-227ENST00000560970 TTC37Q6PGP7 1564 aa18.06■□□□□ 0.48
TPM1-227ENST00000560970 CSRNP3Q8WYN3 585 aa18.06■□□□□ 0.48
TPM1-227ENST00000560970 ARID3CA6NKF2 412 aa18.05■□□□□ 0.48
TPM1-227ENST00000560970 P3H3Q8IVL6 736 aa18.05■□□□□ 0.48
TPM1-227ENST00000560970 MADDQ8WXG6 1647 aa18.03■□□□□ 0.48
TPM1-227ENST00000560970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.01■□□□□ 0.47
TPM1-227ENST00000560970 HECW1Q76N89 1606 aa18.01■□□□□ 0.47
TPM1-227ENST00000560970 MYO5CQ9NQX4 1742 aa18.01■□□□□ 0.47
TPM1-227ENST00000560970 ZMYM4Q5VZL5 1548 aa18■□□□□ 0.47
TPM1-227ENST00000560970 RIMS1Q86UR5 1692 aaKnown RBP17.99■□□□□ 0.47
TPM1-227ENST00000560970 CDK13Q14004 1512 aaKnown RBP17.96■□□□□ 0.47
TPM1-227ENST00000560970 FANCAO15360 1455 aa17.95■□□□□ 0.46
TPM1-227ENST00000560970 PTPRMP28827 1452 aa17.95■□□□□ 0.46
TPM1-227ENST00000560970 SIGLEC1Q9BZZ2 1709 aa17.95■□□□□ 0.46
TPM1-227ENST00000560970 LRRIQ1Q96JM4 1722 aa17.95■□□□□ 0.46
TPM1-227ENST00000560970 FER1L4A9Z1Z3 1794 aa17.94■□□□□ 0.46
TPM1-227ENST00000560970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.92■□□□□ 0.46
TPM1-227ENST00000560970 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
TPM1-227ENST00000560970 DENND4BO75064 1496 aaPredicted RBP17.92■□□□□ 0.46
TPM1-227ENST00000560970 ZFYVE16Q7Z3T8 1539 aa17.92■□□□□ 0.46
TPM1-227ENST00000560970 KIF14Q15058 1648 aa17.91■□□□□ 0.46
TPM1-227ENST00000560970 PCF11O94913 1555 aaKnown RBP17.91■□□□□ 0.46
TPM1-227ENST00000560970 AKNAQ7Z591 1439 aa17.89■□□□□ 0.45
TPM1-227ENST00000560970 RAPGEF3O95398 923 aa17.88■□□□□ 0.45
TPM1-227ENST00000560970 RANGAP1P46060 587 aaPredicted RBP17.88■□□□□ 0.45
TPM1-227ENST00000560970 ILDR1Q86SU0 546 aaPredicted RBP17.87■□□□□ 0.45
TPM1-227ENST00000560970 FMN1Q68DA7 1419 aa17.86■□□□□ 0.45
TPM1-227ENST00000560970 ARHGAP35Q9NRY4 1499 aa17.85■□□□□ 0.45
TPM1-227ENST00000560970 MAGI2Q86UL8 1455 aa17.84■□□□□ 0.45
TPM1-227ENST00000560970 POGZQ7Z3K3 1410 aa17.84■□□□□ 0.45
TPM1-227ENST00000560970 LMTK3Q96Q04 1460 aa17.83■□□□□ 0.45
TPM1-227ENST00000560970 PLEKHD1A6NEE1 506 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms