RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 SYNJ2O15056 1496 aa13.39□□□□□ -0.27
CCDC33-209ENST00000560565 MYT1Q01538 1121 aa13.38□□□□□ -0.27
CCDC33-209ENST00000560565 EEA1Q15075 1411 aa13.38□□□□□ -0.27
CCDC33-209ENST00000560565 DISP3Q9P2K9 1392 aa13.37□□□□□ -0.27
CCDC33-209ENST00000560565 ERICH3Q5RHP9 1530 aa13.33□□□□□ -0.28
CCDC33-209ENST00000560565 HECW2Q9P2P5 1572 aa13.32□□□□□ -0.28
CCDC33-209ENST00000560565 FHAD1B1AJZ9 1412 aa13.3□□□□□ -0.28
CCDC33-209ENST00000560565 ADAMTS12P58397 1594 aa13.3□□□□□ -0.28
CCDC33-209ENST00000560565 GRIN2AQ12879 1464 aa13.29□□□□□ -0.28
CCDC33-209ENST00000560565 CLASP1Q7Z460 1538 aa13.29□□□□□ -0.28
CCDC33-209ENST00000560565 KIF27Q86VH2 1401 aa13.29□□□□□ -0.28
CCDC33-209ENST00000560565 IGF1RP08069 1367 aa13.24□□□□□ -0.29
CCDC33-209ENST00000560565 NUP160Q12769 1436 aa13.22□□□□□ -0.29
CCDC33-209ENST00000560565 CEP170Q5SW79 1584 aa13.22□□□□□ -0.29
CCDC33-209ENST00000560565 KIF21BO75037 1637 aa13.21□□□□□ -0.3
CCDC33-209ENST00000560565 CUL7Q14999 1698 aa13.19□□□□□ -0.3
CCDC33-209ENST00000560565 CARMIL1Q5VZK9 1371 aa13.17□□□□□ -0.3
CCDC33-209ENST00000560565 PPARGC1BQ86YN6 1023 aaKnown RBP13.16□□□□□ -0.3
CCDC33-209ENST00000560565 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
CCDC33-209ENST00000560565 RUSC2Q8N2Y8 1516 aa13.16□□□□□ -0.3
CCDC33-209ENST00000560565 JPH4Q96JJ6 628 aa13.15□□□□□ -0.3
CCDC33-209ENST00000560565 SHROOM2Q13796 1616 aa13.13□□□□□ -0.31
CCDC33-209ENST00000560565 FAM9AQ8IZU1 332 aaPredicted RBP13.13□□□□□ -0.31
CCDC33-209ENST00000560565 PRG4Q92954 1404 aaPredicted RBP13.11□□□□□ -0.31
CCDC33-209ENST00000560565 GOLGA3Q08378 1498 aa13.1□□□□□ -0.31
CCDC33-209ENST00000560565 KIAA0586Q9BVV6 1533 aa13.1□□□□□ -0.31
CCDC33-209ENST00000560565 PRXQ9BXM0 1461 aa13.07□□□□□ -0.32
CCDC33-209ENST00000560565 RAPGEF2Q9Y4G8 1499 aa13.07□□□□□ -0.32
CCDC33-209ENST00000560565 LOC105371045A0A1W2PR82 267 aa13.06□□□□□ -0.32
CCDC33-209ENST00000560565 SPATA31D1Q6ZQQ2 1576 aa13.05□□□□□ -0.32
CCDC33-209ENST00000560565 TNIKQ9UKE5 1360 aa13.04□□□□□ -0.32
CCDC33-209ENST00000560565 IQGAP2Q13576 1575 aa13.01□□□□□ -0.33
CCDC33-209ENST00000560565 CENPBP07199 599 aaPredicted RBP13□□□□□ -0.33
CCDC33-209ENST00000560565 CARMIL2Q6F5E8 1435 aa12.99□□□□□ -0.33
CCDC33-209ENST00000560565 CTTNBP2Q8WZ74 1663 aa12.98□□□□□ -0.33
CCDC33-209ENST00000560565 TTBK1Q5TCY1 1321 aaPredicted RBP12.96□□□□□ -0.33
CCDC33-209ENST00000560565 KIF13AQ9H1H9 1805 aa12.96□□□□□ -0.33
CCDC33-209ENST00000560565 ADGRL1O94910 1474 aa12.96□□□□□ -0.34
CCDC33-209ENST00000560565 NPM1P06748 294 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCDC33-209ENST00000560565 PTPRGP23470 1445 aa12.95□□□□□ -0.34
CCDC33-209ENST00000560565 UBTFP17480 764 aaKnown RBP12.94□□□□□ -0.34
CCDC33-209ENST00000560565 UGGT2Q9NYU1 1516 aa12.93□□□□□ -0.34
CCDC33-209ENST00000560565 DISP1Q96F81 1524 aa12.92□□□□□ -0.34
CCDC33-209ENST00000560565 CEP162Q5TB80 1403 aa12.91□□□□□ -0.34
CCDC33-209ENST00000560565 EHMT2Q96KQ7 1210 aa12.91□□□□□ -0.34
CCDC33-209ENST00000560565 ADCY10Q96PN6 1610 aa12.89□□□□□ -0.35
CCDC33-209ENST00000560565 KIAA0556O60303 1618 aa12.87□□□□□ -0.35
CCDC33-209ENST00000560565 SCAF1Q9H7N4 1312 aaKnown RBP12.86□□□□□ -0.35
CCDC33-209ENST00000560565 ACIN1Q9UKV3 1341 aaKnown RBP12.86□□□□□ -0.35
CCDC33-209ENST00000560565 UACAQ9BZF9 1416 aa12.85□□□□□ -0.35
CCDC33-209ENST00000560565 KDM6BO15054 1643 aa12.84□□□□□ -0.35
CCDC33-209ENST00000560565 CLIP1P30622 1438 aa12.84□□□□□ -0.35
CCDC33-209ENST00000560565 MAPKBP1O60336 1514 aa12.83□□□□□ -0.35
CCDC33-209ENST00000560565 EFCAB5A4FU69 1503 aa12.83□□□□□ -0.36
CCDC33-209ENST00000560565 ABCC2Q92887 1545 aa12.83□□□□□ -0.36
CCDC33-209ENST00000560565 FAM69CQ0P6D2 419 aa12.82□□□□□ -0.36
CCDC33-209ENST00000560565 UHRF1BP1LA0JNW5 1464 aa12.82□□□□□ -0.36
CCDC33-209ENST00000560565 P3H3Q8IVL6 736 aa12.81□□□□□ -0.36
CCDC33-209ENST00000560565 RANGAP1P46060 587 aaPredicted RBP12.8□□□□□ -0.36
CCDC33-209ENST00000560565 ABCC10Q5T3U5 1492 aa12.79□□□□□ -0.36
CCDC33-209ENST00000560565 CCER1Q8TC90 406 aaPredicted RBP12.78□□□□□ -0.36
CCDC33-209ENST00000560565 PLB1Q6P1J6 1458 aa12.77□□□□□ -0.37
CCDC33-209ENST00000560565 KDM5BQ9UGL1 1544 aa12.77□□□□□ -0.37
CCDC33-209ENST00000560565 CLSPNQ9HAW4 1339 aa12.76□□□□□ -0.37
CCDC33-209ENST00000560565 VPS8Q8N3P4 1428 aa12.76□□□□□ -0.37
CCDC33-209ENST00000560565 SAMD9Q5K651 1589 aa12.76□□□□□ -0.37
CCDC33-209ENST00000560565 DIP2BQ9P265 1576 aa12.76□□□□□ -0.37
CCDC33-209ENST00000560565 ASXL2Q76L83 1435 aa12.75□□□□□ -0.37
CCDC33-209ENST00000560565 ARHGAP35Q9NRY4 1499 aa12.74□□□□□ -0.37
CCDC33-209ENST00000560565 ZCCHC11Q5TAX3 1644 aaKnown RBP12.73□□□□□ -0.37
CCDC33-209ENST00000560565 ABCA8O94911 1581 aa12.73□□□□□ -0.37
CCDC33-209ENST00000560565 TSPOAP1O95153 1857 aa12.72□□□□□ -0.37
CCDC33-209ENST00000560565 DIEXFQ68CQ4 756 aaKnown RBP12.71□□□□□ -0.37
CCDC33-209ENST00000560565 CERKQ8TCT0 537 aa12.71□□□□□ -0.37
CCDC33-209ENST00000560565 FHOD3Q2V2M9 1422 aa12.7□□□□□ -0.38
CCDC33-209ENST00000560565 ARID3CA6NKF2 412 aa12.69□□□□□ -0.38
CCDC33-209ENST00000560565 GLI2P10070 1586 aa12.68□□□□□ -0.38
CCDC33-209ENST00000560565 EPRSP07814 1512 aaKnown RBP12.67□□□□□ -0.38
CCDC33-209ENST00000560565 WDR7Q9Y4E6 1490 aa12.67□□□□□ -0.38
CCDC33-209ENST00000560565 KCNH8Q96L42 1107 aa12.67□□□□□ -0.38
CCDC33-209ENST00000560565 RAPGEF6Q8TEU7 1601 aa12.66□□□□□ -0.38
CCDC33-209ENST00000560565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.66□□□□□ -0.38
CCDC33-209ENST00000560565 HNRNPUL2Q1KMD3 747 aaKnown RBP12.66□□□□□ -0.38
CCDC33-209ENST00000560565 ATP10BO94823 1461 aa12.65□□□□□ -0.38
CCDC33-209ENST00000560565 MAP3K1Q13233 1512 aa12.65□□□□□ -0.38
CCDC33-209ENST00000560565 FMN1Q68DA7 1419 aa12.64□□□□□ -0.39
CCDC33-209ENST00000560565 CFAP43Q8NDM7 1665 aa12.63□□□□□ -0.39
CCDC33-209ENST00000560565 FYCO1Q9BQS8 1478 aa12.62□□□□□ -0.39
CCDC33-209ENST00000560565 MAP3K4Q9Y6R4 1608 aa12.62□□□□□ -0.39
CCDC33-209ENST00000560565 NUP153P49790 1475 aaKnown RBP12.61□□□□□ -0.39
CCDC33-209ENST00000560565 APLP2Q06481 763 aa12.6□□□□□ -0.39
CCDC33-209ENST00000560565 ATP1B4Q9UN42 357 aaPredicted RBP12.6□□□□□ -0.39
CCDC33-209ENST00000560565 PPRC1Q5VV67 1664 aaKnown RBP12.6□□□□□ -0.39
CCDC33-209ENST00000560565 PCF11O94913 1555 aaKnown RBP12.6□□□□□ -0.39
CCDC33-209ENST00000560565 PLEKHD1A6NEE1 506 aa12.59□□□□□ -0.39
CCDC33-209ENST00000560565 ZNF316A6NFI3 1004 aaPredicted RBP12.59□□□□□ -0.39
CCDC33-209ENST00000560565 NEUROD1Q13562 356 aa12.59□□□□□ -0.39
CCDC33-209ENST00000560565 GTF3C3Q9Y5Q9 886 aa12.59□□□□□ -0.39
CCDC33-209ENST00000560565 CD109Q6YHK3 1445 aa12.59□□□□□ -0.39
CCDC33-209ENST00000560565 CASKIN1Q8WXD9 1431 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms