RNA–Protein interactions for RNA: ENST00000560494.1

SLTM-222, Transcript of SAFB like transcription modulator, humanhuman

TSL 3

Gene SLTM, Length 674 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-222ENST00000560494 PBRM1Q86U86 1689 aa19.9■□□□□ 0.78
SLTM-222ENST00000560494 THOC2Q8NI27 1593 aaKnown RBP19.87■□□□□ 0.77
SLTM-222ENST00000560494 ARAP1Q96P48 1450 aa19.85■□□□□ 0.77
SLTM-222ENST00000560494 GRIN2BQ13224 1484 aa19.84■□□□□ 0.77
SLTM-222ENST00000560494 ARHGAP35Q9NRY4 1499 aa19.82■□□□□ 0.76
SLTM-222ENST00000560494 TDRD9Q8NDG6 1382 aaKnown RBP19.82■□□□□ 0.76
SLTM-222ENST00000560494 FHAD1B1AJZ9 1412 aa19.81■□□□□ 0.76
SLTM-222ENST00000560494 ADAMTS12P58397 1594 aa19.78■□□□□ 0.76
SLTM-222ENST00000560494 MAP3K1Q13233 1512 aa19.78■□□□□ 0.76
SLTM-222ENST00000560494 HRCP23327 699 aa19.76■□□□□ 0.75
SLTM-222ENST00000560494 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.754e-6■■■□□ 17.5
SLTM-222ENST00000560494 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
SLTM-222ENST00000560494 ZEB1P37275 1124 aaPredicted RBP19.7■□□□□ 0.74
SLTM-222ENST00000560494 MAGI1Q96QZ7 1491 aaPredicted RBP19.7■□□□□ 0.74
SLTM-222ENST00000560494 FMN1Q68DA7 1419 aa19.68■□□□□ 0.74
SLTM-222ENST00000560494 SAMD9Q5K651 1589 aa19.68■□□□□ 0.74
SLTM-222ENST00000560494 FYCO1Q9BQS8 1478 aa19.66■□□□□ 0.74
SLTM-222ENST00000560494 RANGAP1P46060 587 aaPredicted RBP19.65■□□□□ 0.74
SLTM-222ENST00000560494 IQGAP2Q13576 1575 aa19.63■□□□□ 0.73
SLTM-222ENST00000560494 PPP4R3CPQ6ZMV5 832 aa19.62■□□□□ 0.73
SLTM-222ENST00000560494 CFAP43Q8NDM7 1665 aa19.62■□□□□ 0.73
SLTM-222ENST00000560494 TIAM1Q13009 1591 aa19.61■□□□□ 0.73
SLTM-222ENST00000560494 ZNF608Q9ULD9 1512 aaPredicted RBP19.61■□□□□ 0.73
SLTM-222ENST00000560494 CASKIN1Q8WXD9 1431 aa19.59■□□□□ 0.73
SLTM-222ENST00000560494 PPARGC1BQ86YN6 1023 aaKnown RBP19.58■□□□□ 0.72
SLTM-222ENST00000560494 SNAPC4Q5SXM2 1469 aa19.58■□□□□ 0.72
SLTM-222ENST00000560494 SYNJ2O15056 1496 aa19.57■□□□□ 0.72
SLTM-222ENST00000560494 PCF11O94913 1555 aaKnown RBP19.56■□□□□ 0.72
SLTM-222ENST00000560494 GRIN2AQ12879 1464 aa19.55■□□□□ 0.72
SLTM-222ENST00000560494 KIAA0586Q9BVV6 1533 aa19.55■□□□□ 0.72
SLTM-222ENST00000560494 UGGT2Q9NYU1 1516 aa19.55■□□□□ 0.72
SLTM-222ENST00000560494 FHOD3Q2V2M9 1422 aa19.51■□□□□ 0.71
SLTM-222ENST00000560494 LRRC9Q6ZRR7 1453 aa19.48■□□□□ 0.71
SLTM-222ENST00000560494 CCDC18Q5T9S5 1454 aa19.48■□□□□ 0.71
SLTM-222ENST00000560494 RRBP1Q9P2E9 1410 aaKnown RBP19.47■□□□□ 0.71
SLTM-222ENST00000560494 HECW1Q76N89 1606 aa19.46■□□□□ 0.71
SLTM-222ENST00000560494 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
SLTM-222ENST00000560494 TTBK1Q5TCY1 1321 aaPredicted RBP19.42■□□□□ 0.7
SLTM-222ENST00000560494 NUP160Q12769 1436 aa19.41■□□□□ 0.7
SLTM-222ENST00000560494 KIAA0556O60303 1618 aa19.4■□□□□ 0.7
SLTM-222ENST00000560494 EHBP1L1Q8N3D4 1523 aa19.37■□□□□ 0.69
SLTM-222ENST00000560494 CARMIL2Q6F5E8 1435 aa19.37■□□□□ 0.69
SLTM-222ENST00000560494 SCAF1Q9H7N4 1312 aaKnown RBP19.37■□□□□ 0.69
SLTM-222ENST00000560494 KANK4Q5T7N3 995 aaPredicted RBP19.37■□□□□ 0.69
SLTM-222ENST00000560494 P3H3Q8IVL6 736 aa19.37■□□□□ 0.69
SLTM-222ENST00000560494 CEP170Q5SW79 1584 aa19.36■□□□□ 0.69
SLTM-222ENST00000560494 CCNB3Q8WWL7 1395 aa19.36■□□□□ 0.69
SLTM-222ENST00000560494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.34■□□□□ 0.69
SLTM-222ENST00000560494 KCNA4P22459 653 aa19.33■□□□□ 0.68
SLTM-222ENST00000560494 SUPT6HQ7KZ85 1726 aaKnown RBP19.32■□□□□ 0.68
SLTM-222ENST00000560494 CCER1Q8TC90 406 aaPredicted RBP19.32■□□□□ 0.68
SLTM-222ENST00000560494 DISP1Q96F81 1524 aa19.31■□□□□ 0.68
SLTM-222ENST00000560494 MTUS2Q5JR59 1369 aa19.31■□□□□ 0.68
SLTM-222ENST00000560494 ATP1B4Q9UN42 357 aaPredicted RBP19.29■□□□□ 0.68
SLTM-222ENST00000560494 RAPGEF6Q8TEU7 1601 aa19.27■□□□□ 0.68
SLTM-222ENST00000560494 LRRIQ1Q96JM4 1722 aa19.26■□□□□ 0.67
SLTM-222ENST00000560494 EPRSP07814 1512 aaKnown RBP19.25■□□□□ 0.67
SLTM-222ENST00000560494 CLSPNQ9HAW4 1339 aa19.23■□□□□ 0.67
SLTM-222ENST00000560494 FBLN2P98095 1184 aa19.22■□□□□ 0.67
SLTM-222ENST00000560494 CHD1O14646 1710 aa19.22■□□□□ 0.67
SLTM-222ENST00000560494 HNRNPUL2Q1KMD3 747 aaKnown RBP19.2■□□□□ 0.66
SLTM-222ENST00000560494 CDK11AQ9UQ88 783 aaPredicted RBP19.2■□□□□ 0.66
SLTM-222ENST00000560494 PHLDB1Q86UU1 1377 aa19.19■□□□□ 0.66
SLTM-222ENST00000560494 ARHGEF11O15085 1522 aa19.19■□□□□ 0.66
SLTM-222ENST00000560494 NCBP3Q53F19 620 aaKnown RBP19.18■□□□□ 0.66
SLTM-222ENST00000560494 JPH4Q96JJ6 628 aa19.18■□□□□ 0.66
SLTM-222ENST00000560494 NCOA2Q15596 1464 aa19.17■□□□□ 0.66
SLTM-222ENST00000560494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.17■□□□□ 0.66
SLTM-222ENST00000560494 MYOM3Q5VTT5 1437 aa19.17■□□□□ 0.66
SLTM-222ENST00000560494 FGD6Q6ZV73 1430 aa19.17■□□□□ 0.66
SLTM-222ENST00000560494 SHROOM2Q13796 1616 aa19.16■□□□□ 0.66
SLTM-222ENST00000560494 MAPK8IP2Q13387 824 aaPredicted RBP19.14■□□□□ 0.65
SLTM-222ENST00000560494 MIA2Q96PC5 1412 aa19.13■□□□□ 0.65
SLTM-222ENST00000560494 NUP153P49790 1475 aaKnown RBP19.12■□□□□ 0.65
SLTM-222ENST00000560494 ABCA8O94911 1581 aa19.1■□□□□ 0.65
SLTM-222ENST00000560494 ACIN1Q9UKV3 1341 aaKnown RBP19.09■□□□□ 0.65
SLTM-222ENST00000560494 ADCY10Q96PN6 1610 aa19.08■□□□□ 0.65
SLTM-222ENST00000560494 CDK13Q14004 1512 aaKnown RBP19.08■□□□□ 0.64
SLTM-222ENST00000560494 TCOF1Q13428 1488 aaKnown RBP19.08■□□□□ 0.64
SLTM-222ENST00000560494 ITSN2Q9NZM3 1697 aa19.07■□□□□ 0.64
SLTM-222ENST00000560494 PTPN23Q9H3S7 1636 aa19.07■□□□□ 0.64
SLTM-222ENST00000560494 MAGI3Q5TCQ9 1506 aa19.06■□□□□ 0.64
SLTM-222ENST00000560494 PRG4Q92954 1404 aaPredicted RBP19.06■□□□□ 0.64
SLTM-222ENST00000560494 FAM50AQ14320 339 aaKnown RBP19.05■□□□□ 0.64
SLTM-222ENST00000560494 TROQ12816 1431 aaPredicted RBP19.05■□□□□ 0.64
SLTM-222ENST00000560494 SETD5Q9C0A6 1442 aa19.05■□□□□ 0.64
SLTM-222ENST00000560494 CLASP1Q7Z460 1538 aa19.04■□□□□ 0.64
SLTM-222ENST00000560494 CNKSR2Q8WXI2 1034 aa19.03■□□□□ 0.64
SLTM-222ENST00000560494 PTPRGP23470 1445 aa19.01■□□□□ 0.63
SLTM-222ENST00000560494 PLB1Q6P1J6 1458 aa19.01■□□□□ 0.63
SLTM-222ENST00000560494 AKNAQ7Z591 1439 aa19■□□□□ 0.63
SLTM-222ENST00000560494 KIF14Q15058 1648 aa18.98■□□□□ 0.63
SLTM-222ENST00000560494 DHX57Q6P158 1386 aaKnown RBP18.97■□□□□ 0.63
SLTM-222ENST00000560494 HFM1A2PYH4 1435 aa18.96■□□□□ 0.63
SLTM-222ENST00000560494 RAB3GAP2Q9H2M9 1393 aa18.95■□□□□ 0.62
SLTM-222ENST00000560494 UACAQ9BZF9 1416 aa18.94■□□□□ 0.62
SLTM-222ENST00000560494 ITGAEP38570 1179 aa18.93■□□□□ 0.62
SLTM-222ENST00000560494 GCC2Q8IWJ2 1684 aa18.92■□□□□ 0.62
SLTM-222ENST00000560494 PLEKHD1A6NEE1 506 aa18.92■□□□□ 0.62
SLTM-222ENST00000560494 ABCC2Q92887 1545 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms