RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 ARHGEF11O15085 1522 aa25.91■■□□□ 1.74
LYSMD2-204ENST00000560491 PRXQ9BXM0 1461 aa25.9■■□□□ 1.74
LYSMD2-204ENST00000560491 CSRNP3Q8WYN3 585 aa25.88■■□□□ 1.73
LYSMD2-204ENST00000560491 SHROOM2Q13796 1616 aa25.85■■□□□ 1.73
LYSMD2-204ENST00000560491 KIAA0586Q9BVV6 1533 aa25.81■■□□□ 1.72
LYSMD2-204ENST00000560491 ERCC6L2Q5T890 1561 aa25.78■■□□□ 1.72
LYSMD2-204ENST00000560491 CTTNBP2Q8WZ74 1663 aa25.77■■□□□ 1.72
LYSMD2-204ENST00000560491 IQGAP2Q13576 1575 aa25.75■■□□□ 1.71
LYSMD2-204ENST00000560491 KIF21BO75037 1637 aa25.74■■□□□ 1.71
LYSMD2-204ENST00000560491 ARAP1Q96P48 1450 aa25.72■■□□□ 1.71
LYSMD2-204ENST00000560491 JPH4Q96JJ6 628 aa25.72■■□□□ 1.71
LYSMD2-204ENST00000560491 PRG4Q92954 1404 aaPredicted RBP25.7■■□□□ 1.7
LYSMD2-204ENST00000560491 CYB5RLQ6IPT4 315 aa25.62■■□□□ 1.69
LYSMD2-204ENST00000560491 EHMT2Q96KQ7 1210 aa25.61■■□□□ 1.69
LYSMD2-204ENST00000560491 UGGT2Q9NYU1 1516 aa25.59■■□□□ 1.69
LYSMD2-204ENST00000560491 GOLGA3Q08378 1498 aa25.58■■□□□ 1.69
LYSMD2-204ENST00000560491 DISP1Q96F81 1524 aa25.54■■□□□ 1.68
LYSMD2-204ENST00000560491 KIAA0556O60303 1618 aa25.52■■□□□ 1.68
LYSMD2-204ENST00000560491 CARMIL2Q6F5E8 1435 aa25.51■■□□□ 1.67
LYSMD2-204ENST00000560491 UBTFP17480 764 aaKnown RBP25.46■■□□□ 1.67
LYSMD2-204ENST00000560491 TNIKQ9UKE5 1360 aa25.43■■□□□ 1.66
LYSMD2-204ENST00000560491 TTBK1Q5TCY1 1321 aaPredicted RBP25.42■■□□□ 1.66
LYSMD2-204ENST00000560491 SAMD9Q5K651 1589 aa25.42■■□□□ 1.66
LYSMD2-204ENST00000560491 RANGAP1P46060 587 aaPredicted RBP25.41■■□□□ 1.66
LYSMD2-204ENST00000560491 PTPRGP23470 1445 aa25.39■■□□□ 1.66
LYSMD2-204ENST00000560491 ADCY10Q96PN6 1610 aa25.34■■□□□ 1.65
LYSMD2-204ENST00000560491 P3H3Q8IVL6 736 aa25.34■■□□□ 1.65
LYSMD2-204ENST00000560491 EFCAB5A4FU69 1503 aa25.3■■□□□ 1.64
LYSMD2-204ENST00000560491 FHOD3Q2V2M9 1422 aa25.27■■□□□ 1.64
LYSMD2-204ENST00000560491 UACAQ9BZF9 1416 aa25.24■■□□□ 1.63
LYSMD2-204ENST00000560491 PLB1Q6P1J6 1458 aa25.23■■□□□ 1.63
LYSMD2-204ENST00000560491 ARHGAP35Q9NRY4 1499 aa25.23■■□□□ 1.63
LYSMD2-204ENST00000560491 ABCC2Q92887 1545 aa25.22■■□□□ 1.63
LYSMD2-204ENST00000560491 ABCA8O94911 1581 aa25.21■■□□□ 1.63
LYSMD2-204ENST00000560491 UHRF1BP1LA0JNW5 1464 aa25.21■■□□□ 1.63
LYSMD2-204ENST00000560491 LOC105371045A0A1W2PR82 267 aa25.2■■□□□ 1.62
LYSMD2-204ENST00000560491 RAPGEF6Q8TEU7 1601 aa25.13■■□□□ 1.61
LYSMD2-204ENST00000560491 NPM1P06748 294 aaKnown RBP eCLIP25.12■■□□□ 1.61
LYSMD2-204ENST00000560491 ZCCHC11Q5TAX3 1644 aaKnown RBP25.12■■□□□ 1.61
LYSMD2-204ENST00000560491 CLIP1P30622 1438 aa25.12■■□□□ 1.61
LYSMD2-204ENST00000560491 KDM5BQ9UGL1 1544 aa25.1■■□□□ 1.61
LYSMD2-204ENST00000560491 MAPKBP1O60336 1514 aa25.09■■□□□ 1.61
LYSMD2-204ENST00000560491 CEP162Q5TB80 1403 aa25.07■■□□□ 1.6
LYSMD2-204ENST00000560491 FMN1Q68DA7 1419 aa25.03■■□□□ 1.6
LYSMD2-204ENST00000560491 TRHP20396 242 aaPredicted RBP25.03■■□□□ 1.6
LYSMD2-204ENST00000560491 NUP153P49790 1475 aaKnown RBP25.02■■□□□ 1.6
LYSMD2-204ENST00000560491 ARID3CA6NKF2 412 aa25.02■■□□□ 1.6
LYSMD2-204ENST00000560491 ASXL2Q76L83 1435 aa25■■□□□ 1.59
LYSMD2-204ENST00000560491 KIF13AQ9H1H9 1805 aa25■■□□□ 1.59
LYSMD2-204ENST00000560491 ATP10BO94823 1461 aa24.97■■□□□ 1.59
LYSMD2-204ENST00000560491 DIP2BQ9P265 1576 aa24.97■■□□□ 1.59
LYSMD2-204ENST00000560491 PCF11O94913 1555 aaKnown RBP24.96■■□□□ 1.59
LYSMD2-204ENST00000560491 HECW1Q76N89 1606 aa24.95■■□□□ 1.58
LYSMD2-204ENST00000560491 ABCC10Q5T3U5 1492 aa24.94■■□□□ 1.58
LYSMD2-204ENST00000560491 LRRIQ1Q96JM4 1722 aa24.92■■□□□ 1.58
LYSMD2-204ENST00000560491 WDR7Q9Y4E6 1490 aa24.9■■□□□ 1.58
LYSMD2-204ENST00000560491 ATP1B4Q9UN42 357 aaPredicted RBP24.9■■□□□ 1.58
LYSMD2-204ENST00000560491 CDK13Q14004 1512 aaKnown RBP24.9■■□□□ 1.58
LYSMD2-204ENST00000560491 CASKIN1Q8WXD9 1431 aa24.88■■□□□ 1.57
LYSMD2-204ENST00000560491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.87■■□□□ 1.57
LYSMD2-204ENST00000560491 HNRNPUL2Q1KMD3 747 aaKnown RBP24.87■■□□□ 1.57
LYSMD2-204ENST00000560491 EPRSP07814 1512 aaKnown RBP24.86■■□□□ 1.57
LYSMD2-204ENST00000560491 FAM69CQ0P6D2 419 aa24.86■■□□□ 1.57
LYSMD2-204ENST00000560491 FYCO1Q9BQS8 1478 aa24.84■■□□□ 1.57
LYSMD2-204ENST00000560491 GLI2P10070 1586 aa24.82■■□□□ 1.56
LYSMD2-204ENST00000560491 TSPOAP1O95153 1857 aa24.79■■□□□ 1.56
LYSMD2-204ENST00000560491 KCNH8Q96L42 1107 aa24.78■■□□□ 1.56
LYSMD2-204ENST00000560491 CCDC18Q5T9S5 1454 aa24.77■■□□□ 1.56
LYSMD2-204ENST00000560491 MAP3K4Q9Y6R4 1608 aa24.76■■□□□ 1.55
LYSMD2-204ENST00000560491 VPS8Q8N3P4 1428 aa24.74■■□□□ 1.55
LYSMD2-204ENST00000560491 PLEKHD1A6NEE1 506 aa24.72■■□□□ 1.55
LYSMD2-204ENST00000560491 PPRC1Q5VV67 1664 aaKnown RBP24.72■■□□□ 1.55
LYSMD2-204ENST00000560491 CFAP43Q8NDM7 1665 aa24.71■■□□□ 1.55
LYSMD2-204ENST00000560491 ABCA9Q8IUA7 1624 aa24.68■■□□□ 1.54
LYSMD2-204ENST00000560491 MAGI3Q5TCQ9 1506 aa24.68■■□□□ 1.54
LYSMD2-204ENST00000560491 KIF14Q15058 1648 aa24.65■■□□□ 1.54
LYSMD2-204ENST00000560491 CDK11AQ9UQ88 783 aaPredicted RBP24.65■■□□□ 1.54
LYSMD2-204ENST00000560491 TTC37Q6PGP7 1564 aa24.64■■□□□ 1.54
LYSMD2-204ENST00000560491 TROQ12816 1431 aaPredicted RBP24.64■■□□□ 1.54
LYSMD2-204ENST00000560491 CD109Q6YHK3 1445 aa24.63■■□□□ 1.53
LYSMD2-204ENST00000560491 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.63■■□□□ 1.53
LYSMD2-204ENST00000560491 TIAM1Q13009 1591 aa24.59■■□□□ 1.53
LYSMD2-204ENST00000560491 TEX14Q8IWB6 1497 aa24.56■■□□□ 1.52
LYSMD2-204ENST00000560491 EHBP1L1Q8N3D4 1523 aa24.52■■□□□ 1.52
LYSMD2-204ENST00000560491 MYO5CQ9NQX4 1742 aa24.52■■□□□ 1.52
LYSMD2-204ENST00000560491 MTUS2Q5JR59 1369 aa24.51■■□□□ 1.51
LYSMD2-204ENST00000560491 KDM6BO15054 1643 aa24.5■■□□□ 1.51
LYSMD2-204ENST00000560491 MAP3K1Q13233 1512 aa24.47■■□□□ 1.51
LYSMD2-204ENST00000560491 CDC42BPAQ5VT25 1732 aa24.45■■□□□ 1.5
LYSMD2-204ENST00000560491 LRRC9Q6ZRR7 1453 aa24.44■■□□□ 1.5
LYSMD2-204ENST00000560491 CDC42BPBQ9Y5S2 1711 aa24.44■■□□□ 1.5
LYSMD2-204ENST00000560491 PLCH2O75038 1416 aa24.44■■□□□ 1.5
LYSMD2-204ENST00000560491 PREX2Q70Z35 1606 aa24.43■■□□□ 1.5
LYSMD2-204ENST00000560491 COL17A1Q9UMD9 1497 aaPredicted RBP24.43■■□□□ 1.5
LYSMD2-204ENST00000560491 CFAP74Q9C0B2 1584 aa24.42■■□□□ 1.5
LYSMD2-204ENST00000560491 SUPT6HQ7KZ85 1726 aaKnown RBP24.42■■□□□ 1.5
LYSMD2-204ENST00000560491 FANCAO15360 1455 aa24.42■■□□□ 1.5
LYSMD2-204ENST00000560491 NEO1Q92859 1461 aa24.41■■□□□ 1.5
LYSMD2-204ENST00000560491 ARAP3Q8WWN8 1544 aa24.4■■□□□ 1.5
LYSMD2-204ENST00000560491 KANK4Q5T7N3 995 aaPredicted RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms