RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-223ENST00000560369 DIEXFQ68CQ4 756 aaKnown RBP8.65□□□□□ -1.03
LRRC49-223ENST00000560369 WDR97A6NE52 1622 aa8.64□□□□□ -1.03
LRRC49-223ENST00000560369 ATP1B4Q9UN42 357 aaPredicted RBP8.64□□□□□ -1.03
LRRC49-223ENST00000560369 FHOD3Q2V2M9 1422 aa8.63□□□□□ -1.03
LRRC49-223ENST00000560369 PCF11O94913 1555 aaKnown RBP8.63□□□□□ -1.03
LRRC49-223ENST00000560369 LAMC3Q9Y6N6 1575 aa8.63□□□□□ -1.03
LRRC49-223ENST00000560369 TIAM1Q13009 1591 aa8.62□□□□□ -1.03
LRRC49-223ENST00000560369 CTTNBP2Q8WZ74 1663 aa8.62□□□□□ -1.03
LRRC49-223ENST00000560369 NEUROD1Q13562 356 aa8.62□□□□□ -1.03
LRRC49-223ENST00000560369 RRBP1Q9P2E9 1410 aaKnown RBP8.61□□□□□ -1.03
LRRC49-223ENST00000560369 DHX57Q6P158 1386 aaKnown RBP8.61□□□□□ -1.03
LRRC49-223ENST00000560369 LRRIQ1Q96JM4 1722 aa8.6□□□□□ -1.03
LRRC49-223ENST00000560369 ZNF316A6NFI3 1004 aaPredicted RBP8.6□□□□□ -1.03
LRRC49-223ENST00000560369 ACIN1Q9UKV3 1341 aaKnown RBP8.59□□□□□ -1.03
LRRC49-223ENST00000560369 PHLDB1Q86UU1 1377 aa8.59□□□□□ -1.03
LRRC49-223ENST00000560369 CCNB3Q8WWL7 1395 aa8.59□□□□□ -1.03
LRRC49-223ENST00000560369 ABCA5Q8WWZ7 1642 aa8.59□□□□□ -1.03
LRRC49-223ENST00000560369 CUL7Q14999 1698 aa8.58□□□□□ -1.04
LRRC49-223ENST00000560369 LRRC9Q6ZRR7 1453 aa8.58□□□□□ -1.04
LRRC49-223ENST00000560369 CFAP43Q8NDM7 1665 aa8.57□□□□□ -1.04
LRRC49-223ENST00000560369 TARBP1Q13395 1621 aaKnown RBP8.57□□□□□ -1.04
LRRC49-223ENST00000560369 GAPVD1Q14C86 1478 aa8.56□□□□□ -1.04
LRRC49-223ENST00000560369 GTF3C3Q9Y5Q9 886 aa8.55□□□□□ -1.04
LRRC49-223ENST00000560369 PDS5BQ9NTI5 1447 aa8.55□□□□□ -1.04
LRRC49-223ENST00000560369 FAM50AQ14320 339 aaKnown RBP8.55□□□□□ -1.04
LRRC49-223ENST00000560369 AQRO60306 1485 aaKnown RBP eCLIP8.54□□□□□ -1.04
LRRC49-223ENST00000560369 MIER1Q8N108 512 aa8.54□□□□□ -1.04
LRRC49-223ENST00000560369 PBRM1Q86U86 1689 aa8.53□□□□□ -1.04
LRRC49-223ENST00000560369 RAB3GAP2Q9H2M9 1393 aa8.53□□□□□ -1.04
LRRC49-223ENST00000560369 MAP3K1Q13233 1512 aa8.52□□□□□ -1.04
LRRC49-223ENST00000560369 SNAPC4Q5SXM2 1469 aa8.52□□□□□ -1.05
LRRC49-223ENST00000560369 FHAD1B1AJZ9 1412 aa8.51□□□□□ -1.05
LRRC49-223ENST00000560369 PIAS4Q8N2W9 510 aaPredicted RBP8.51□□□□□ -1.05
LRRC49-223ENST00000560369 YTHDC1Q96MU7 727 aaKnown RBP8.51□□□□□ -1.05
LRRC49-223ENST00000560369 SAMD9Q5K651 1589 aa8.51□□□□□ -1.05
LRRC49-223ENST00000560369 EFCAB5A4FU69 1503 aa8.51□□□□□ -1.05
LRRC49-223ENST00000560369 MAPKBP1O60336 1514 aa8.51□□□□□ -1.05
LRRC49-223ENST00000560369 CASKIN1Q8WXD9 1431 aa8.51□□□□□ -1.05
LRRC49-223ENST00000560369 ZNF608Q9ULD9 1512 aaPredicted RBP8.5□□□□□ -1.05
LRRC49-223ENST00000560369 ARID3CA6NKF2 412 aa8.5□□□□□ -1.05
LRRC49-223ENST00000560369 FYCO1Q9BQS8 1478 aa8.5□□□□□ -1.05
LRRC49-223ENST00000560369 SIN3AQ96ST3 1273 aa8.49□□□□□ -1.05
LRRC49-223ENST00000560369 MAGI3Q5TCQ9 1506 aa8.48□□□□□ -1.05
LRRC49-223ENST00000560369 CENPBP07199 599 aaPredicted RBP8.47□□□□□ -1.05
LRRC49-223ENST00000560369 PTPRKQ15262 1439 aa8.47□□□□□ -1.05
LRRC49-223ENST00000560369 SETD5Q9C0A6 1442 aa8.47□□□□□ -1.05
LRRC49-223ENST00000560369 GRIN2BQ13224 1484 aa8.46□□□□□ -1.05
LRRC49-223ENST00000560369 MRC2Q9UBG0 1479 aa8.46□□□□□ -1.05
LRRC49-223ENST00000560369 ADAMTS12P58397 1594 aa8.45□□□□□ -1.06
LRRC49-223ENST00000560369 FMN1Q68DA7 1419 aa8.45□□□□□ -1.06
LRRC49-223ENST00000560369 MTUS2Q5JR59 1369 aa8.44□□□□□ -1.06
LRRC49-223ENST00000560369 CLSPNQ9HAW4 1339 aa8.44□□□□□ -1.06
LRRC49-223ENST00000560369 FGD6Q6ZV73 1430 aa8.44□□□□□ -1.06
LRRC49-223ENST00000560369 CDK13Q14004 1512 aaKnown RBP8.43□□□□□ -1.06
LRRC49-223ENST00000560369 NCOA2Q15596 1464 aa8.43□□□□□ -1.06
LRRC49-223ENST00000560369 IQGAP2Q13576 1575 aa8.42□□□□□ -1.06
LRRC49-223ENST00000560369 HIRIP3Q9BW71 556 aaPredicted RBP8.41□□□□□ -1.06
LRRC49-223ENST00000560369 EIF4G3O43432 1585 aaKnown RBP8.41□□□□□ -1.06
LRRC49-223ENST00000560369 SUPT6HQ7KZ85 1726 aaKnown RBP8.4□□□□□ -1.06
LRRC49-223ENST00000560369 WDR62O43379 1518 aa8.4□□□□□ -1.06
LRRC49-223ENST00000560369 CHIC2Q9UKJ5 165 aa8.39□□□□□ -1.07
LRRC49-223ENST00000560369 KDM6BO15054 1643 aa8.39□□□□□ -1.07
LRRC49-223ENST00000560369 THOC2Q8NI27 1593 aaKnown RBP8.39□□□□□ -1.07
LRRC49-223ENST00000560369 PTPN23Q9H3S7 1636 aa8.39□□□□□ -1.07
LRRC49-223ENST00000560369 MYOM3Q5VTT5 1437 aa8.38□□□□□ -1.07
LRRC49-223ENST00000560369 EPRSP07814 1512 aaKnown RBP8.38□□□□□ -1.07
LRRC49-223ENST00000560369 UGGT2Q9NYU1 1516 aa8.38□□□□□ -1.07
LRRC49-223ENST00000560369 KCNH8Q96L42 1107 aa8.38□□□□□ -1.07
LRRC49-223ENST00000560369 RRP7BPQ9NSQ0 103 aa8.37□□□□□ -1.07
LRRC49-223ENST00000560369 PPP6R1Q9UPN7 881 aa8.37□□□□□ -1.07
LRRC49-223ENST00000560369 CCDC18Q5T9S5 1454 aa8.37□□□□□ -1.07
LRRC49-223ENST00000560369 IFT140Q96RY7 1462 aa8.37□□□□□ -1.07
LRRC49-223ENST00000560369 DISP1Q96F81 1524 aa8.37□□□□□ -1.07
LRRC49-223ENST00000560369 ERCC6Q03468 1493 aa8.37□□□□□ -1.07
LRRC49-223ENST00000560369 ARHGEF11O15085 1522 aa8.37□□□□□ -1.07
LRRC49-223ENST00000560369 EHBP1L1Q8N3D4 1523 aa8.37□□□□□ -1.07
LRRC49-223ENST00000560369 HECW1Q76N89 1606 aa8.36□□□□□ -1.07
LRRC49-223ENST00000560369 FBLN2P98095 1184 aa8.36□□□□□ -1.07
LRRC49-223ENST00000560369 NAIPQ13075 1403 aa8.36□□□□□ -1.07
LRRC49-223ENST00000560369 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.35□□□□□ -1.07
LRRC49-223ENST00000560369 KIAA0556O60303 1618 aa8.35□□□□□ -1.07
LRRC49-223ENST00000560369 GRIN2AQ12879 1464 aa8.35□□□□□ -1.07
LRRC49-223ENST00000560369 CEP170Q5SW79 1584 aa8.35□□□□□ -1.07
LRRC49-223ENST00000560369 ZNF644Q9H582 1327 aaPredicted RBP8.34□□□□□ -1.07
LRRC49-223ENST00000560369 HFM1A2PYH4 1435 aa8.33□□□□□ -1.08
LRRC49-223ENST00000560369 DENND4BO75064 1496 aaPredicted RBP8.33□□□□□ -1.08
LRRC49-223ENST00000560369 ADRA2BP18089 450 aa8.33□□□□□ -1.08
LRRC49-223ENST00000560369 NUP153P49790 1475 aaKnown RBP8.32□□□□□ -1.08
LRRC49-223ENST00000560369 PLPPR3Q6T4P5 718 aa8.32□□□□□ -1.08
LRRC49-223ENST00000560369 KIAA0586Q9BVV6 1533 aa8.32□□□□□ -1.08
LRRC49-223ENST00000560369 DDX10Q13206 875 aaKnown RBP8.32□□□□□ -1.08
LRRC49-223ENST00000560369 PPP1R15AO75807 674 aaPredicted RBP8.31□□□□□ -1.08
LRRC49-223ENST00000560369 PLB1Q6P1J6 1458 aa8.31□□□□□ -1.08
LRRC49-223ENST00000560369 RAPGEF6Q8TEU7 1601 aa8.31□□□□□ -1.08
LRRC49-223ENST00000560369 CHMP7Q8WUX9 453 aaPredicted RBP8.3□□□□□ -1.08
LRRC49-223ENST00000560369 GCC2Q8IWJ2 1684 aa8.3□□□□□ -1.08
LRRC49-223ENST00000560369 TCOF1Q13428 1488 aaKnown RBP8.3□□□□□ -1.08
LRRC49-223ENST00000560369 PRG4Q92954 1404 aaPredicted RBP8.3□□□□□ -1.08
LRRC49-223ENST00000560369 UACAQ9BZF9 1416 aa8.3□□□□□ -1.08
LRRC49-223ENST00000560369 KDM5BQ9UGL1 1544 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms