RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 RUSC2Q8N2Y8 1516 aa40.03■■■■■ 4
CRNDE-209ENST00000560208 PRG4Q92954 1404 aaPredicted RBP40.02■■■■■ 4
CRNDE-209ENST00000560208 CARMIL1Q5VZK9 1371 aa39.91■■■■□ 3.98
CRNDE-209ENST00000560208 KIAA0586Q9BVV6 1533 aa39.89■■■■□ 3.98
CRNDE-209ENST00000560208 RAPGEF2Q9Y4G8 1499 aa39.58■■■■□ 3.93
CRNDE-209ENST00000560208 IQGAP2Q13576 1575 aa39.56■■■■□ 3.92
CRNDE-209ENST00000560208 NPM1P06748 294 aaKnown RBP eCLIP39.51■■■■□ 3.92
CRNDE-209ENST00000560208 ADCY10Q96PN6 1610 aa39.51■■■■□ 3.91
CRNDE-209ENST00000560208 CARMIL2Q6F5E8 1435 aa39.49■■■■□ 3.91
CRNDE-209ENST00000560208 PTPRGP23470 1445 aa39.46■■■■□ 3.91
CRNDE-209ENST00000560208 KIF13AQ9H1H9 1805 aa39.43■■■■□ 3.9
CRNDE-209ENST00000560208 TNIKQ9UKE5 1360 aa39.42■■■■□ 3.9
CRNDE-209ENST00000560208 TTBK1Q5TCY1 1321 aaPredicted RBP39.4■■■■□ 3.9
CRNDE-209ENST00000560208 MAPKBP1O60336 1514 aa39.36■■■■□ 3.89
CRNDE-209ENST00000560208 DISP1Q96F81 1524 aa39.34■■■■□ 3.89
CRNDE-209ENST00000560208 UGGT2Q9NYU1 1516 aa39.32■■■■□ 3.89
CRNDE-209ENST00000560208 ABCC10Q5T3U5 1492 aa39.29■■■■□ 3.88
CRNDE-209ENST00000560208 FAM69CQ0P6D2 419 aa39.27■■■■□ 3.88
CRNDE-209ENST00000560208 CTTNBP2Q8WZ74 1663 aa39.27■■■■□ 3.88
CRNDE-209ENST00000560208 PRXQ9BXM0 1461 aa39.27■■■■□ 3.88
CRNDE-209ENST00000560208 DIP2BQ9P265 1576 aa39.2■■■■□ 3.87
CRNDE-209ENST00000560208 KIAA0556O60303 1618 aa39.19■■■■□ 3.86
CRNDE-209ENST00000560208 ABCC2Q92887 1545 aa39.18■■■■□ 3.86
CRNDE-209ENST00000560208 UACAQ9BZF9 1416 aa39.15■■■■□ 3.86
CRNDE-209ENST00000560208 UHRF1BP1LA0JNW5 1464 aa39.15■■■■□ 3.86
CRNDE-209ENST00000560208 CSRNP3Q8WYN3 585 aa39.1■■■■□ 3.85
CRNDE-209ENST00000560208 GOLGA3Q08378 1498 aa39.05■■■■□ 3.84
CRNDE-209ENST00000560208 ASXL2Q76L83 1435 aa39.01■■■■□ 3.84
CRNDE-209ENST00000560208 PLB1Q6P1J6 1458 aa38.99■■■■□ 3.83
CRNDE-209ENST00000560208 TSPOAP1O95153 1857 aa38.98■■■■□ 3.83
CRNDE-209ENST00000560208 EEA1Q15075 1411 aa38.97■■■■□ 3.83
CRNDE-209ENST00000560208 KDM5BQ9UGL1 1544 aa38.97■■■■□ 3.83
CRNDE-209ENST00000560208 ZCCHC11Q5TAX3 1644 aaKnown RBP38.91■■■■□ 3.82
CRNDE-209ENST00000560208 FAM9AQ8IZU1 332 aaPredicted RBP38.85■■■■□ 3.81
CRNDE-209ENST00000560208 GLI2P10070 1586 aa38.85■■■■□ 3.81
CRNDE-209ENST00000560208 ABCA8O94911 1581 aa38.82■■■■□ 3.8
CRNDE-209ENST00000560208 P3H3Q8IVL6 736 aa38.78■■■■□ 3.8
CRNDE-209ENST00000560208 EPRSP07814 1512 aaKnown RBP38.78■■■■□ 3.8
CRNDE-209ENST00000560208 KDM6BO15054 1643 aa38.77■■■■□ 3.8
CRNDE-209ENST00000560208 CHIC1Q5VXU3 224 aa38.73■■■■□ 3.79
CRNDE-209ENST00000560208 PPRC1Q5VV67 1664 aaKnown RBP38.71■■■■□ 3.79
CRNDE-209ENST00000560208 AEBP2Q6ZN18 517 aaPredicted RBP38.7■■■■□ 3.79
CRNDE-209ENST00000560208 SAMD9Q5K651 1589 aa38.7■■■■□ 3.79
CRNDE-209ENST00000560208 WDR7Q9Y4E6 1490 aa38.69■■■■□ 3.78
CRNDE-209ENST00000560208 MAP3K4Q9Y6R4 1608 aa38.66■■■■□ 3.78
CRNDE-209ENST00000560208 KIF21BO75037 1637 aa38.64■■■■□ 3.78
CRNDE-209ENST00000560208 RANGAP1P46060 587 aaPredicted RBP38.59■■■■□ 3.77
CRNDE-209ENST00000560208 KCNH8Q96L42 1107 aa38.54■■■■□ 3.76
CRNDE-209ENST00000560208 ARID3CA6NKF2 412 aa38.53■■■■□ 3.76
CRNDE-209ENST00000560208 TEX14Q8IWB6 1497 aa38.52■■■■□ 3.76
CRNDE-209ENST00000560208 ATP10BO94823 1461 aa38.51■■■■□ 3.76
CRNDE-209ENST00000560208 RAPGEF6Q8TEU7 1601 aa38.49■■■■□ 3.75
CRNDE-209ENST00000560208 FHOD3Q2V2M9 1422 aa38.46■■■■□ 3.75
CRNDE-209ENST00000560208 CFAP43Q8NDM7 1665 aa38.45■■■■□ 3.75
CRNDE-209ENST00000560208 CD109Q6YHK3 1445 aa38.43■■■■□ 3.74
CRNDE-209ENST00000560208 COL17A1Q9UMD9 1497 aaPredicted RBP38.41■■■■□ 3.74
CRNDE-209ENST00000560208 EHMT2Q96KQ7 1210 aa38.41■■■■□ 3.74
CRNDE-209ENST00000560208 EFCAB5A4FU69 1503 aa38.38■■■■□ 3.74
CRNDE-209ENST00000560208 UBTFP17480 764 aaKnown RBP38.38■■■■□ 3.73
CRNDE-209ENST00000560208 MAGI3Q5TCQ9 1506 aa38.37■■■■□ 3.73
CRNDE-209ENST00000560208 NUP153P49790 1475 aaKnown RBP38.34■■■■□ 3.73
CRNDE-209ENST00000560208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.33■■■■□ 3.73
CRNDE-209ENST00000560208 HNRNPUL2Q1KMD3 747 aaKnown RBP38.33■■■■□ 3.73
CRNDE-209ENST00000560208 KDM4FA0A1W2PPD8 638 aa38.23■■■■□ 3.71
CRNDE-209ENST00000560208 ABCA9Q8IUA7 1624 aa38.22■■■■□ 3.71
CRNDE-209ENST00000560208 PLEKHD1A6NEE1 506 aa38.13■■■■□ 3.69
CRNDE-209ENST00000560208 ARHGAP35Q9NRY4 1499 aa38.11■■■■□ 3.69
CRNDE-209ENST00000560208 ARAP3Q8WWN8 1544 aa38.07■■■■□ 3.68
CRNDE-209ENST00000560208 FMN1Q68DA7 1419 aa38.05■■■■□ 3.68
CRNDE-209ENST00000560208 PHLDB1Q86UU1 1377 aa38.04■■■■□ 3.68
CRNDE-209ENST00000560208 CDK13Q14004 1512 aaKnown RBP38.01■■■■□ 3.67
CRNDE-209ENST00000560208 ADGRL1O94910 1474 aa38■■■■□ 3.67
CRNDE-209ENST00000560208 ATP1B4Q9UN42 357 aaPredicted RBP37.99■■■■□ 3.67
CRNDE-209ENST00000560208 NEO1Q92859 1461 aa37.97■■■■□ 3.67
CRNDE-209ENST00000560208 HECW1Q76N89 1606 aa37.95■■■■□ 3.67
CRNDE-209ENST00000560208 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.92■■■■□ 3.66
CRNDE-209ENST00000560208 RAPGEF3O95398 923 aa37.86■■■■□ 3.65
CRNDE-209ENST00000560208 TTC37Q6PGP7 1564 aa37.85■■■■□ 3.65
CRNDE-209ENST00000560208 FANCAO15360 1455 aa37.8■■■■□ 3.64
CRNDE-209ENST00000560208 CDK11AQ9UQ88 783 aaPredicted RBP37.8■■■■□ 3.64
CRNDE-209ENST00000560208 CFAP74Q9C0B2 1584 aa37.78■■■■□ 3.64
CRNDE-209ENST00000560208 AKNAQ7Z591 1439 aa37.78■■■■□ 3.64
CRNDE-209ENST00000560208 FRMPD1Q5SYB0 1578 aa37.76■■■■□ 3.63
CRNDE-209ENST00000560208 LRRIQ1Q96JM4 1722 aa37.75■■■■□ 3.63
CRNDE-209ENST00000560208 DENND4BO75064 1496 aaPredicted RBP37.71■■■■□ 3.63
CRNDE-209ENST00000560208 RICTORQ6R327 1708 aa37.69■■■■□ 3.62
CRNDE-209ENST00000560208 PLCH2O75038 1416 aa37.69■■■■□ 3.62
CRNDE-209ENST00000560208 CASKIN1Q8WXD9 1431 aa37.69■■■■□ 3.62
CRNDE-209ENST00000560208 TROQ12816 1431 aaPredicted RBP37.68■■■■□ 3.62
CRNDE-209ENST00000560208 PCF11O94913 1555 aaKnown RBP37.68■■■■□ 3.62
CRNDE-209ENST00000560208 CLIP1P30622 1438 aa37.66■■■■□ 3.62
CRNDE-209ENST00000560208 KIF14Q15058 1648 aa37.65■■■■□ 3.62
CRNDE-209ENST00000560208 MYO5CQ9NQX4 1742 aa37.64■■■■□ 3.62
CRNDE-209ENST00000560208 CCDC18Q5T9S5 1454 aa37.6■■■■□ 3.61
CRNDE-209ENST00000560208 EFCAB2Q5VUJ9 269 aa37.57■■■■□ 3.6
CRNDE-209ENST00000560208 FYCO1Q9BQS8 1478 aa37.55■■■■□ 3.6
CRNDE-209ENST00000560208 SCAPERQ9BY12 1400 aa37.54■■■■□ 3.6
CRNDE-209ENST00000560208 ARHGEF40Q8TER5 1519 aa37.53■■■■□ 3.6
CRNDE-209ENST00000560208 ZMYM4Q5VZL5 1548 aa37.52■■■■□ 3.6
CRNDE-209ENST00000560208 ARID4BQ4LE39 1312 aaPredicted RBP37.5■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms