RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 RAPGEF2Q9Y4G8 1499 aa28.23■■■□□ 2.11
RPL28-209ENST00000560055 PRXQ9BXM0 1461 aa28.22■■■□□ 2.11
RPL28-209ENST00000560055 CSRNP3Q8WYN3 585 aa28.17■■■□□ 2.1
RPL28-209ENST00000560055 SHROOM2Q13796 1616 aa28.17■■■□□ 2.1
RPL28-209ENST00000560055 KIAA0586Q9BVV6 1533 aa28.16■■■□□ 2.1
RPL28-209ENST00000560055 JPH4Q96JJ6 628 aa28.09■■■□□ 2.09
RPL28-209ENST00000560055 ERCC6L2Q5T890 1561 aa28.05■■■□□ 2.08
RPL28-209ENST00000560055 FAM9AQ8IZU1 332 aaPredicted RBP28.05■■■□□ 2.08
RPL28-209ENST00000560055 PRG4Q92954 1404 aaPredicted RBP28.01■■■□□ 2.08
RPL28-209ENST00000560055 IQGAP2Q13576 1575 aa27.99■■■□□ 2.07
RPL28-209ENST00000560055 TRHP20396 242 aaPredicted RBP27.97■■■□□ 2.07
RPL28-209ENST00000560055 KIF21BO75037 1637 aa27.94■■■□□ 2.06
RPL28-209ENST00000560055 CTTNBP2Q8WZ74 1663 aa27.91■■■□□ 2.06
RPL28-209ENST00000560055 UGGT2Q9NYU1 1516 aa27.9■■■□□ 2.06
RPL28-209ENST00000560055 DISP1Q96F81 1524 aa27.83■■■□□ 2.05
RPL28-209ENST00000560055 CARMIL2Q6F5E8 1435 aa27.82■■■□□ 2.04
RPL28-209ENST00000560055 GOLGA3Q08378 1498 aa27.77■■■□□ 2.04
RPL28-209ENST00000560055 KIAA0556O60303 1618 aa27.74■■■□□ 2.03
RPL28-209ENST00000560055 TNIKQ9UKE5 1360 aa27.74■■■□□ 2.03
RPL28-209ENST00000560055 PTPRGP23470 1445 aa27.7■■■□□ 2.03
RPL28-209ENST00000560055 UBTFP17480 764 aaKnown RBP27.64■■■□□ 2.02
RPL28-209ENST00000560055 EHMT2Q96KQ7 1210 aa27.64■■■□□ 2.02
RPL28-209ENST00000560055 SAMD9Q5K651 1589 aa27.63■■■□□ 2.01
RPL28-209ENST00000560055 ADCY10Q96PN6 1610 aa27.59■■■□□ 2.01
RPL28-209ENST00000560055 TTBK1Q5TCY1 1321 aaPredicted RBP27.56■■■□□ 2
RPL28-209ENST00000560055 UHRF1BP1LA0JNW5 1464 aa27.53■■■□□ 2
RPL28-209ENST00000560055 UACAQ9BZF9 1416 aa27.53■■■□□ 2
RPL28-209ENST00000560055 EFCAB5A4FU69 1503 aa27.52■■■□□ 2
RPL28-209ENST00000560055 RANGAP1P46060 587 aaPredicted RBP27.49■■□□□ 1.99
RPL28-209ENST00000560055 P3H3Q8IVL6 736 aa27.49■■□□□ 1.99
RPL28-209ENST00000560055 ABCC2Q92887 1545 aa27.48■■□□□ 1.99
RPL28-209ENST00000560055 PLB1Q6P1J6 1458 aa27.46■■□□□ 1.99
RPL28-209ENST00000560055 ABCA8O94911 1581 aa27.45■■□□□ 1.99
RPL28-209ENST00000560055 FHOD3Q2V2M9 1422 aa27.44■■□□□ 1.98
RPL28-209ENST00000560055 KIF13AQ9H1H9 1805 aa27.43■■□□□ 1.98
RPL28-209ENST00000560055 ARHGAP35Q9NRY4 1499 aa27.42■■□□□ 1.98
RPL28-209ENST00000560055 NPM1P06748 294 aaKnown RBP eCLIP27.41■■□□□ 1.98
RPL28-209ENST00000560055 MAPKBP1O60336 1514 aa27.4■■□□□ 1.98
RPL28-209ENST00000560055 KDM5BQ9UGL1 1544 aa27.39■■□□□ 1.98
RPL28-209ENST00000560055 RAPGEF6Q8TEU7 1601 aa27.3■■□□□ 1.96
RPL28-209ENST00000560055 LOC105371045A0A1W2PR82 267 aa27.29■■□□□ 1.96
RPL28-209ENST00000560055 ZCCHC11Q5TAX3 1644 aaKnown RBP27.29■■□□□ 1.96
RPL28-209ENST00000560055 ABCC10Q5T3U5 1492 aa27.27■■□□□ 1.96
RPL28-209ENST00000560055 CLIP1P30622 1438 aa27.27■■□□□ 1.96
RPL28-209ENST00000560055 FAM69CQ0P6D2 419 aa27.27■■□□□ 1.96
RPL28-209ENST00000560055 FMN1Q68DA7 1419 aa27.25■■□□□ 1.95
RPL28-209ENST00000560055 ASXL2Q76L83 1435 aa27.25■■□□□ 1.95
RPL28-209ENST00000560055 DIP2BQ9P265 1576 aa27.24■■□□□ 1.95
RPL28-209ENST00000560055 NUP153P49790 1475 aaKnown RBP27.24■■□□□ 1.95
RPL28-209ENST00000560055 ATP10BO94823 1461 aa27.22■■□□□ 1.95
RPL28-209ENST00000560055 CEP162Q5TB80 1403 aa27.2■■□□□ 1.94
RPL28-209ENST00000560055 WDR7Q9Y4E6 1490 aa27.15■■□□□ 1.94
RPL28-209ENST00000560055 ARID3CA6NKF2 412 aa27.14■■□□□ 1.94
RPL28-209ENST00000560055 EPRSP07814 1512 aaKnown RBP27.11■■□□□ 1.93
RPL28-209ENST00000560055 TSPOAP1O95153 1857 aa27.1■■□□□ 1.93
RPL28-209ENST00000560055 GLI2P10070 1586 aa27.09■■□□□ 1.93
RPL28-209ENST00000560055 HECW1Q76N89 1606 aa27.09■■□□□ 1.93
RPL28-209ENST00000560055 CASKIN1Q8WXD9 1431 aa27.07■■□□□ 1.92
RPL28-209ENST00000560055 PCF11O94913 1555 aaKnown RBP27.05■■□□□ 1.92
RPL28-209ENST00000560055 CDK13Q14004 1512 aaKnown RBP27.03■■□□□ 1.92
RPL28-209ENST00000560055 FYCO1Q9BQS8 1478 aa27.01■■□□□ 1.91
RPL28-209ENST00000560055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.01■■□□□ 1.91
RPL28-209ENST00000560055 HNRNPUL2Q1KMD3 747 aaKnown RBP27.01■■□□□ 1.91
RPL28-209ENST00000560055 ATP1B4Q9UN42 357 aaPredicted RBP26.99■■□□□ 1.91
RPL28-209ENST00000560055 KCNH8Q96L42 1107 aa26.96■■□□□ 1.91
RPL28-209ENST00000560055 LRRIQ1Q96JM4 1722 aa26.96■■□□□ 1.91
RPL28-209ENST00000560055 MAP3K4Q9Y6R4 1608 aa26.95■■□□□ 1.91
RPL28-209ENST00000560055 PLEKHD1A6NEE1 506 aa26.95■■□□□ 1.9
RPL28-209ENST00000560055 AEBP2Q6ZN18 517 aaPredicted RBP26.94■■□□□ 1.9
RPL28-209ENST00000560055 KDM6BO15054 1643 aa26.94■■□□□ 1.9
RPL28-209ENST00000560055 CCDC18Q5T9S5 1454 aa26.93■■□□□ 1.9
RPL28-209ENST00000560055 PPRC1Q5VV67 1664 aaKnown RBP26.92■■□□□ 1.9
RPL28-209ENST00000560055 CFAP43Q8NDM7 1665 aa26.88■■□□□ 1.89
RPL28-209ENST00000560055 ABCA9Q8IUA7 1624 aa26.87■■□□□ 1.89
RPL28-209ENST00000560055 CDK11AQ9UQ88 783 aaPredicted RBP26.87■■□□□ 1.89
RPL28-209ENST00000560055 VPS8Q8N3P4 1428 aa26.87■■□□□ 1.89
RPL28-209ENST00000560055 CD109Q6YHK3 1445 aa26.86■■□□□ 1.89
RPL28-209ENST00000560055 MAGI3Q5TCQ9 1506 aa26.84■■□□□ 1.89
RPL28-209ENST00000560055 TROQ12816 1431 aaPredicted RBP26.83■■□□□ 1.89
RPL28-209ENST00000560055 TEX14Q8IWB6 1497 aa26.8■■□□□ 1.88
RPL28-209ENST00000560055 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.8■■□□□ 1.88
RPL28-209ENST00000560055 TTC37Q6PGP7 1564 aa26.75■■□□□ 1.87
RPL28-209ENST00000560055 KIF14Q15058 1648 aa26.74■■□□□ 1.87
RPL28-209ENST00000560055 COL17A1Q9UMD9 1497 aaPredicted RBP26.74■■□□□ 1.87
RPL28-209ENST00000560055 TIAM1Q13009 1591 aa26.66■■□□□ 1.86
RPL28-209ENST00000560055 PLCH2O75038 1416 aa26.65■■□□□ 1.86
RPL28-209ENST00000560055 MTUS2Q5JR59 1369 aa26.65■■□□□ 1.86
RPL28-209ENST00000560055 NEO1Q92859 1461 aa26.65■■□□□ 1.86
RPL28-209ENST00000560055 MAP3K1Q13233 1512 aa26.65■■□□□ 1.86
RPL28-209ENST00000560055 PHLDB1Q86UU1 1377 aa26.63■■□□□ 1.85
RPL28-209ENST00000560055 KDM4FA0A1W2PPD8 638 aa26.63■■□□□ 1.85
RPL28-209ENST00000560055 EHBP1L1Q8N3D4 1523 aa26.63■■□□□ 1.85
RPL28-209ENST00000560055 ARAP3Q8WWN8 1544 aa26.62■■□□□ 1.85
RPL28-209ENST00000560055 FANCAO15360 1455 aa26.61■■□□□ 1.85
RPL28-209ENST00000560055 MYO5CQ9NQX4 1742 aa26.59■■□□□ 1.85
RPL28-209ENST00000560055 LRRC9Q6ZRR7 1453 aa26.56■■□□□ 1.84
RPL28-209ENST00000560055 CFAP74Q9C0B2 1584 aa26.56■■□□□ 1.84
RPL28-209ENST00000560055 AKNAQ7Z591 1439 aa26.55■■□□□ 1.84
RPL28-209ENST00000560055 PREX2Q70Z35 1606 aa26.53■■□□□ 1.84
RPL28-209ENST00000560055 GPATCH8Q9UKJ3 1502 aaKnown RBP26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms