RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 KIAA0586Q9BVV6 1533 aa22.88■■□□□ 1.25
CHRNB4-204ENST00000559849 SHROOM2Q13796 1616 aa22.88■■□□□ 1.25
CHRNB4-204ENST00000559849 ARAP1Q96P48 1450 aa22.88■■□□□ 1.25
CHRNB4-204ENST00000559849 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
CHRNB4-204ENST00000559849 EEA1Q15075 1411 aa22.85■■□□□ 1.25
CHRNB4-204ENST00000559849 PRXQ9BXM0 1461 aa22.82■■□□□ 1.24
CHRNB4-204ENST00000559849 PRG4Q92954 1404 aaPredicted RBP22.81■■□□□ 1.24
CHRNB4-204ENST00000559849 ERCC6L2Q5T890 1561 aa22.8■■□□□ 1.24
CHRNB4-204ENST00000559849 FAM9AQ8IZU1 332 aaPredicted RBP22.77■■□□□ 1.23
CHRNB4-204ENST00000559849 IQGAP2Q13576 1575 aa22.73■■□□□ 1.23
CHRNB4-204ENST00000559849 CTTNBP2Q8WZ74 1663 aa22.65■■□□□ 1.22
CHRNB4-204ENST00000559849 CARMIL2Q6F5E8 1435 aa22.65■■□□□ 1.22
CHRNB4-204ENST00000559849 UGGT2Q9NYU1 1516 aa22.61■■□□□ 1.21
CHRNB4-204ENST00000559849 DISP1Q96F81 1524 aa22.57■■□□□ 1.2
CHRNB4-204ENST00000559849 KIF21BO75037 1637 aa22.57■■□□□ 1.2
CHRNB4-204ENST00000559849 TNIKQ9UKE5 1360 aa22.57■■□□□ 1.2
CHRNB4-204ENST00000559849 PTPRGP23470 1445 aa22.56■■□□□ 1.2
CHRNB4-204ENST00000559849 TTBK1Q5TCY1 1321 aaPredicted RBP22.52■■□□□ 1.2
CHRNB4-204ENST00000559849 GOLGA3Q08378 1498 aa22.52■■□□□ 1.19
CHRNB4-204ENST00000559849 KIAA0556O60303 1618 aa22.5■■□□□ 1.19
CHRNB4-204ENST00000559849 UBTFP17480 764 aaKnown RBP22.46■■□□□ 1.19
CHRNB4-204ENST00000559849 NPM1P06748 294 aaKnown RBP eCLIP22.46■■□□□ 1.19
CHRNB4-204ENST00000559849 EHMT2Q96KQ7 1210 aa22.46■■□□□ 1.19
CHRNB4-204ENST00000559849 TRHP20396 242 aaPredicted RBP22.45■■□□□ 1.18
CHRNB4-204ENST00000559849 ADCY10Q96PN6 1610 aa22.43■■□□□ 1.18
CHRNB4-204ENST00000559849 UACAQ9BZF9 1416 aa22.4■■□□□ 1.18
CHRNB4-204ENST00000559849 RANGAP1P46060 587 aaPredicted RBP22.38■■□□□ 1.17
CHRNB4-204ENST00000559849 P3H3Q8IVL6 736 aa22.38■■□□□ 1.17
CHRNB4-204ENST00000559849 UHRF1BP1LA0JNW5 1464 aa22.37■■□□□ 1.17
CHRNB4-204ENST00000559849 SAMD9Q5K651 1589 aa22.36■■□□□ 1.17
CHRNB4-204ENST00000559849 ABCC2Q92887 1545 aa22.33■■□□□ 1.17
CHRNB4-204ENST00000559849 MAPKBP1O60336 1514 aa22.3■■□□□ 1.16
CHRNB4-204ENST00000559849 PLB1Q6P1J6 1458 aa22.3■■□□□ 1.16
CHRNB4-204ENST00000559849 EFCAB5A4FU69 1503 aa22.28■■□□□ 1.16
CHRNB4-204ENST00000559849 ABCA8O94911 1581 aa22.26■■□□□ 1.15
CHRNB4-204ENST00000559849 KDM5BQ9UGL1 1544 aa22.26■■□□□ 1.15
CHRNB4-204ENST00000559849 FHOD3Q2V2M9 1422 aa22.24■■□□□ 1.15
CHRNB4-204ENST00000559849 ABCC10Q5T3U5 1492 aa22.21■■□□□ 1.15
CHRNB4-204ENST00000559849 FAM69CQ0P6D2 419 aa22.19■■□□□ 1.14
CHRNB4-204ENST00000559849 ASXL2Q76L83 1435 aa22.19■■□□□ 1.14
CHRNB4-204ENST00000559849 ZCCHC11Q5TAX3 1644 aaKnown RBP22.19■■□□□ 1.14
CHRNB4-204ENST00000559849 KIF13AQ9H1H9 1805 aa22.18■■□□□ 1.14
CHRNB4-204ENST00000559849 ARHGAP35Q9NRY4 1499 aa22.18■■□□□ 1.14
CHRNB4-204ENST00000559849 RAPGEF6Q8TEU7 1601 aa22.15■■□□□ 1.14
CHRNB4-204ENST00000559849 DIP2BQ9P265 1576 aa22.14■■□□□ 1.13
CHRNB4-204ENST00000559849 ARID3CA6NKF2 412 aa22.11■■□□□ 1.13
CHRNB4-204ENST00000559849 FMN1Q68DA7 1419 aa22.11■■□□□ 1.13
CHRNB4-204ENST00000559849 ATP10BO94823 1461 aa22.11■■□□□ 1.13
CHRNB4-204ENST00000559849 NUP153P49790 1475 aaKnown RBP22.07■■□□□ 1.12
CHRNB4-204ENST00000559849 WDR7Q9Y4E6 1490 aa22.07■■□□□ 1.12
CHRNB4-204ENST00000559849 CLIP1P30622 1438 aa22.07■■□□□ 1.12
CHRNB4-204ENST00000559849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.07■■□□□ 1.12
CHRNB4-204ENST00000559849 HNRNPUL2Q1KMD3 747 aaKnown RBP22.07■■□□□ 1.12
CHRNB4-204ENST00000559849 LOC105371045A0A1W2PR82 267 aa22.06■■□□□ 1.12
CHRNB4-204ENST00000559849 EPRSP07814 1512 aaKnown RBP22.05■■□□□ 1.12
CHRNB4-204ENST00000559849 GLI2P10070 1586 aa22.05■■□□□ 1.12
CHRNB4-204ENST00000559849 KCNH8Q96L42 1107 aa22.03■■□□□ 1.12
CHRNB4-204ENST00000559849 ATP1B4Q9UN42 357 aaPredicted RBP22.01■■□□□ 1.11
CHRNB4-204ENST00000559849 TSPOAP1O95153 1857 aa21.99■■□□□ 1.11
CHRNB4-204ENST00000559849 PLEKHD1A6NEE1 506 aa21.97■■□□□ 1.11
CHRNB4-204ENST00000559849 HECW1Q76N89 1606 aa21.96■■□□□ 1.11
CHRNB4-204ENST00000559849 CEP162Q5TB80 1403 aa21.96■■□□□ 1.11
CHRNB4-204ENST00000559849 MAP3K4Q9Y6R4 1608 aa21.94■■□□□ 1.1
CHRNB4-204ENST00000559849 CASKIN1Q8WXD9 1431 aa21.92■■□□□ 1.1
CHRNB4-204ENST00000559849 CDK13Q14004 1512 aaKnown RBP21.92■■□□□ 1.1
CHRNB4-204ENST00000559849 CDK11AQ9UQ88 783 aaPredicted RBP21.9■■□□□ 1.1
CHRNB4-204ENST00000559849 CD109Q6YHK3 1445 aa21.9■■□□□ 1.1
CHRNB4-204ENST00000559849 CFAP43Q8NDM7 1665 aa21.89■■□□□ 1.1
CHRNB4-204ENST00000559849 PPRC1Q5VV67 1664 aaKnown RBP21.88■■□□□ 1.09
CHRNB4-204ENST00000559849 PCF11O94913 1555 aaKnown RBP21.87■■□□□ 1.09
CHRNB4-204ENST00000559849 TEX14Q8IWB6 1497 aa21.86■■□□□ 1.09
CHRNB4-204ENST00000559849 FYCO1Q9BQS8 1478 aa21.86■■□□□ 1.09
CHRNB4-204ENST00000559849 ABCA9Q8IUA7 1624 aa21.84■■□□□ 1.09
CHRNB4-204ENST00000559849 LRRIQ1Q96JM4 1722 aa21.84■■□□□ 1.09
CHRNB4-204ENST00000559849 MAGI3Q5TCQ9 1506 aa21.83■■□□□ 1.09
CHRNB4-204ENST00000559849 CCDC18Q5T9S5 1454 aa21.83■■□□□ 1.09
CHRNB4-204ENST00000559849 KDM6BO15054 1643 aa21.8■■□□□ 1.08
CHRNB4-204ENST00000559849 TROQ12816 1431 aaPredicted RBP21.77■■□□□ 1.07
CHRNB4-204ENST00000559849 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.75■■□□□ 1.07
CHRNB4-204ENST00000559849 PHLDB1Q86UU1 1377 aa21.71■■□□□ 1.07
CHRNB4-204ENST00000559849 COL17A1Q9UMD9 1497 aaPredicted RBP21.71■■□□□ 1.07
CHRNB4-204ENST00000559849 TTC37Q6PGP7 1564 aa21.7■■□□□ 1.06
CHRNB4-204ENST00000559849 VPS8Q8N3P4 1428 aa21.7■■□□□ 1.06
CHRNB4-204ENST00000559849 KIF14Q15058 1648 aa21.7■■□□□ 1.06
CHRNB4-204ENST00000559849 NEO1Q92859 1461 aa21.68■■□□□ 1.06
CHRNB4-204ENST00000559849 PLCH2O75038 1416 aa21.66■■□□□ 1.06
CHRNB4-204ENST00000559849 ARAP3Q8WWN8 1544 aa21.65■■□□□ 1.06
CHRNB4-204ENST00000559849 FANCAO15360 1455 aa21.64■■□□□ 1.05
CHRNB4-204ENST00000559849 MTUS2Q5JR59 1369 aa21.63■■□□□ 1.05
CHRNB4-204ENST00000559849 MYO5CQ9NQX4 1742 aa21.62■■□□□ 1.05
CHRNB4-204ENST00000559849 EFCAB2Q5VUJ9 269 aa21.61■■□□□ 1.05
CHRNB4-204ENST00000559849 AKNAQ7Z591 1439 aa21.61■■□□□ 1.05
CHRNB4-204ENST00000559849 CFAP74Q9C0B2 1584 aa21.6■■□□□ 1.05
CHRNB4-204ENST00000559849 RAPGEF3O95398 923 aa21.56■■□□□ 1.04
CHRNB4-204ENST00000559849 TIAM1Q13009 1591 aa21.55■■□□□ 1.04
CHRNB4-204ENST00000559849 ARHGAP5Q13017 1502 aa21.54■■□□□ 1.04
CHRNB4-204ENST00000559849 EHBP1L1Q8N3D4 1523 aa21.54■■□□□ 1.04
CHRNB4-204ENST00000559849 CDC42BPBQ9Y5S2 1711 aa21.53■■□□□ 1.04
CHRNB4-204ENST00000559849 DENND4BO75064 1496 aaPredicted RBP21.53■■□□□ 1.04
CHRNB4-204ENST00000559849 MAP3K1Q13233 1512 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms