RNA–Protein interactions for RNA: ENST00000559561.5

MEIS2-215, Transcript of Meis homeobox 2, human

APPRIS ALT1 TSL 5 BASIC

Gene MEIS2, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEIS2-215	ENST00000559561	VPS8	Q8N3P4	1428 aa		21.51	■■□□□ 1.03
MEIS2-215	ENST00000559561	ARAP1	Q96P48	1450 aa		21.51	■■□□□ 1.03
MEIS2-215	ENST00000559561	ARHGAP35	Q9NRY4	1499 aa		21.49	■■□□□ 1.03
MEIS2-215	ENST00000559561	EFCAB5	A4FU69	1503 aa		21.47	■■□□□ 1.03
MEIS2-215	ENST00000559561	SYNJ2	O15056	1496 aa		21.42	■■□□□ 1.02
MEIS2-215	ENST00000559561	GRIN2A	Q12879	1464 aa		21.42	■■□□□ 1.02
MEIS2-215	ENST00000559561	SAMD9	Q5K651	1589 aa		21.4	■■□□□ 1.02
MEIS2-215	ENST00000559561	RANGAP1	P46060	587 aa	Predicted RBP	21.4	■■□□□ 1.02
MEIS2-215	ENST00000559561	IQGAP2	Q13576	1575 aa		21.4	■■□□□ 1.02
MEIS2-215	ENST00000559561	CEP170	Q5SW79	1584 aa		21.3	■■□□□ 1
MEIS2-215	ENST00000559561	KIAA0586	Q9BVV6	1533 aa		21.3	■■□□□ 1
MEIS2-215	ENST00000559561	UGGT2	Q9NYU1	1516 aa		21.28	■■□□□ 1
MEIS2-215	ENST00000559561	CHD1	O14646	1710 aa		21.27	■■□□□ 1
MEIS2-215	ENST00000559561	NUP160	Q12769	1436 aa		21.26	■□□□□ 0.99
MEIS2-215	ENST00000559561	TRIM26	Q12899	539 aa	Predicted RBP	21.26	■□□□□ 0.99
MEIS2-215	ENST00000559561	FHOD3	Q2V2M9	1422 aa		21.25	■□□□□ 0.99
MEIS2-215	ENST00000559561	PCF11	O94913	1555 aa	Known RBP	21.25	■□□□□ 0.99
MEIS2-215	ENST00000559561	CHMP7	Q8WUX9	453 aa	Predicted RBP	21.22	■□□□□ 0.99
MEIS2-215	ENST00000559561	CFAP43	Q8NDM7	1665 aa		21.21	■□□□□ 0.99
MEIS2-215	ENST00000559561	FYCO1	Q9BQS8	1478 aa		21.2	■□□□□ 0.98
MEIS2-215	ENST00000559561	FMN1	Q68DA7	1419 aa		21.2	■□□□□ 0.98
MEIS2-215	ENST00000559561	MAP3K1	Q13233	1512 aa		21.19	■□□□□ 0.98
MEIS2-215	ENST00000559561	PCGF6	Q9BYE7	350 aa		21.19	■□□□□ 0.98
MEIS2-215	ENST00000559561	KIAA0556	O60303	1618 aa		21.19	■□□□□ 0.98
MEIS2-215	ENST00000559561	TIAM1	Q13009	1591 aa		21.17	■□□□□ 0.98
MEIS2-215	ENST00000559561	PPARGC1B	Q86YN6	1023 aa	Known RBP	21.17	■□□□□ 0.98
MEIS2-215	ENST00000559561	APLP2	Q06481	763 aa		21.16	■□□□□ 0.98
MEIS2-215	ENST00000559561	CASKIN1	Q8WXD9	1431 aa		21.16	■□□□□ 0.98
MEIS2-215	ENST00000559561	DISP1	Q96F81	1524 aa		21.14	■□□□□ 0.97
MEIS2-215	ENST00000559561	P3H3	Q8IVL6	736 aa		21.13	■□□□□ 0.97
MEIS2-215	ENST00000559561	FBLN2	P98095	1184 aa		21.12	■□□□□ 0.97
MEIS2-215	ENST00000559561	LRRIQ1	Q96JM4	1722 aa		21.09	■□□□□ 0.97
MEIS2-215	ENST00000559561	HECW1	Q76N89	1606 aa		21.06	■□□□□ 0.96
MEIS2-215	ENST00000559561	SHROOM2	Q13796	1616 aa		21.05	■□□□□ 0.96
MEIS2-215	ENST00000559561	TTBK1	Q5TCY1	1321 aa	Predicted RBP	21.02	■□□□□ 0.95
MEIS2-215	ENST00000559561	CARMIL2	Q6F5E8	1435 aa		21.01	■□□□□ 0.95
MEIS2-215	ENST00000559561	LRRC9	Q6ZRR7	1453 aa		21.01	■□□□□ 0.95
MEIS2-215	ENST00000559561	CLASP1	Q7Z460	1538 aa		21	■□□□□ 0.95
MEIS2-215	ENST00000559561	CCDC18	Q5T9S5	1454 aa		20.98	■□□□□ 0.95
MEIS2-215	ENST00000559561	KANK4	Q5T7N3	995 aa	Predicted RBP	20.98	■□□□□ 0.95
MEIS2-215	ENST00000559561	RAPGEF6	Q8TEU7	1601 aa		20.98	■□□□□ 0.95
MEIS2-215	ENST00000559561	JPH4	Q96JJ6	628 aa		20.95	■□□□□ 0.95
MEIS2-215	ENST00000559561	PRG4	Q92954	1404 aa	Predicted RBP	20.9	■□□□□ 0.94
MEIS2-215	ENST00000559561	EPRS	P07814	1512 aa	Known RBP	20.9	■□□□□ 0.94
MEIS2-215	ENST00000559561	EHBP1L1	Q8N3D4	1523 aa		20.9	■□□□□ 0.94
MEIS2-215	ENST00000559561	ATP1B4	Q9UN42	357 aa	Predicted RBP	20.88	■□□□□ 0.93
MEIS2-215	ENST00000559561	NUP153	P49790	1475 aa	Known RBP	20.87	■□□□□ 0.93
MEIS2-215	ENST00000559561	ABCA8	O94911	1581 aa		20.87	■□□□□ 0.93
MEIS2-215	ENST00000559561	RRBP1	Q9P2E9	1410 aa	Known RBP	20.86	■□□□□ 0.93
MEIS2-215	ENST00000559561	SUPT6H	Q7KZ85	1726 aa	Known RBP	20.85	■□□□□ 0.93
MEIS2-215	ENST00000559561	CDK13	Q14004	1512 aa	Known RBP	20.85	■□□□□ 0.93
MEIS2-215	ENST00000559561	MAGI3	Q5TCQ9	1506 aa		20.83	■□□□□ 0.93
MEIS2-215	ENST00000559561	PLB1	Q6P1J6	1458 aa		20.82	■□□□□ 0.92
MEIS2-215	ENST00000559561	MTUS2	Q5JR59	1369 aa		20.81	■□□□□ 0.92
MEIS2-215	ENST00000559561	ERCC6L2	Q5T890	1561 aa		20.8	■□□□□ 0.92
MEIS2-215	ENST00000559561	ARHGEF11	O15085	1522 aa		20.78	■□□□□ 0.92
MEIS2-215	ENST00000559561	PHLDB1	Q86UU1	1377 aa		20.77	■□□□□ 0.91
MEIS2-215	ENST00000559561	NCOA2	Q15596	1464 aa		20.75	■□□□□ 0.91
MEIS2-215	ENST00000559561	PTPRG	P23470	1445 aa		20.75	■□□□□ 0.91
MEIS2-215	ENST00000559561	CCNB3	Q8WWL7	1395 aa		20.75	■□□□□ 0.91
MEIS2-215	ENST00000559561	ADCY10	Q96PN6	1610 aa		20.72	■□□□□ 0.91
MEIS2-215	ENST00000559561	ABCC2	Q92887	1545 aa		20.68	■□□□□ 0.9
MEIS2-215	ENST00000559561	MYOM3	Q5VTT5	1437 aa		20.67	■□□□□ 0.9
MEIS2-215	ENST00000559561	FGD6	Q6ZV73	1430 aa		20.67	■□□□□ 0.9
MEIS2-215	ENST00000559561	UACA	Q9BZF9	1416 aa		20.67	■□□□□ 0.9
MEIS2-215	ENST00000559561	TRO	Q12816	1431 aa	Predicted RBP	20.65	■□□□□ 0.9
MEIS2-215	ENST00000559561	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	20.65	■□□□□ 0.9
MEIS2-215	ENST00000559561	ATP10B	O94823	1461 aa		20.65	■□□□□ 0.9
MEIS2-215	ENST00000559561	CDK11A	Q9UQ88	783 aa	Predicted RBP	20.63	■□□□□ 0.89
MEIS2-215	ENST00000559561	UHRF1BP1L	A0JNW5	1464 aa		20.63	■□□□□ 0.89
MEIS2-215	ENST00000559561	ARID3C	A6NKF2	412 aa		20.62	■□□□□ 0.89
MEIS2-215	ENST00000559561	HRC	P23327	699 aa		20.61	■□□□□ 0.89
MEIS2-215	ENST00000559561	OSCAR	Q8IYS5	282 aa		20.61	■□□□□ 0.89
MEIS2-215	ENST00000559561	PTPN23	Q9H3S7	1636 aa		20.61	■□□□□ 0.89
MEIS2-215	ENST00000559561	ITSN2	Q9NZM3	1697 aa		20.61	■□□□□ 0.89
MEIS2-215	ENST00000559561	KIF14	Q15058	1648 aa		20.6	■□□□□ 0.89
MEIS2-215	ENST00000559561	HNRNPUL2	Q1KMD3	747 aa	Known RBP	20.59	■□□□□ 0.89
MEIS2-215	ENST00000559561	TCOF1	Q13428	1488 aa	Known RBP	20.57	■□□□□ 0.88
MEIS2-215	ENST00000559561	ZCCHC11	Q5TAX3	1644 aa	Known RBP	20.56	■□□□□ 0.88
MEIS2-215	ENST00000559561	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	20.56	■□□□□ 0.88
MEIS2-215	ENST00000559561	MIA2	Q96PC5	1412 aa		20.56	■□□□□ 0.88
MEIS2-215	ENST00000559561	KDM5B	Q9UGL1	1544 aa		20.53	■□□□□ 0.88
MEIS2-215	ENST00000559561	CDC42BPA	Q5VT25	1732 aa		20.51	■□□□□ 0.87
MEIS2-215	ENST00000559561	FAM50A	Q14320	339 aa	Known RBP	20.51	■□□□□ 0.87
MEIS2-215	ENST00000559561	ABCC10	Q5T3U5	1492 aa		20.5	■□□□□ 0.87
MEIS2-215	ENST00000559561	PLEKHD1	A6NEE1	506 aa		20.48	■□□□□ 0.87
MEIS2-215	ENST00000559561	GPATCH8	Q9UKJ3	1502 aa	Known RBP	20.45	■□□□□ 0.86
MEIS2-215	ENST00000559561	PREX2	Q70Z35	1606 aa		20.44	■□□□□ 0.86
MEIS2-215	ENST00000559561	DNMT1	P26358	1616 aa	Known RBP	20.43	■□□□□ 0.86
MEIS2-215	ENST00000559561	ZEB1	P37275	1124 aa	Predicted RBP	20.42	■□□□□ 0.86
MEIS2-215	ENST00000559561	ITGAE	P38570	1179 aa		20.42	■□□□□ 0.86
MEIS2-215	ENST00000559561	TTC37	Q6PGP7	1564 aa		20.41	■□□□□ 0.86
MEIS2-215	ENST00000559561	MYO5C	Q9NQX4	1742 aa		20.4	■□□□□ 0.86
MEIS2-215	ENST00000559561	CAMSAP2	Q08AD1	1489 aa		20.4	■□□□□ 0.86
MEIS2-215	ENST00000559561	CROCC2	H7BZ55	1655 aa		20.39	■□□□□ 0.85
MEIS2-215	ENST00000559561	CCER1	Q8TC90	406 aa	Predicted RBP	20.39	■□□□□ 0.85
MEIS2-215	ENST00000559561	CDC42BPB	Q9Y5S2	1711 aa		20.39	■□□□□ 0.85
MEIS2-215	ENST00000559561	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	20.38	■□□□□ 0.85
MEIS2-215	ENST00000559561	GCC2	Q8IWJ2	1684 aa		20.38	■□□□□ 0.85
MEIS2-215	ENST00000559561	PTPRK	Q15262	1439 aa		20.38	■□□□□ 0.85

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms