RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 IGF1RP08069 1367 aa35.72■■■■□ 3.31
TSPAN3-206ENST00000559373 CUL7Q14999 1698 aa35.71■■■■□ 3.31
TSPAN3-206ENST00000559373 KIF13AQ9H1H9 1805 aa35.57■■■■□ 3.29
TSPAN3-206ENST00000559373 KIAA0586Q9BVV6 1533 aa35.53■■■■□ 3.28
TSPAN3-206ENST00000559373 CARMIL1Q5VZK9 1371 aa35.51■■■■□ 3.27
TSPAN3-206ENST00000559373 ADCY10Q96PN6 1610 aa35.44■■■■□ 3.26
TSPAN3-206ENST00000559373 TTBK1Q5TCY1 1321 aaPredicted RBP35.41■■■■□ 3.26
TSPAN3-206ENST00000559373 NPM1P06748 294 aaKnown RBP eCLIP35.32■■■■□ 3.24
TSPAN3-206ENST00000559373 IQGAP2Q13576 1575 aa35.3■■■■□ 3.24
TSPAN3-206ENST00000559373 TSPOAP1O95153 1857 aa35.24■■■■□ 3.23
TSPAN3-206ENST00000559373 FAM69CQ0P6D2 419 aa35.23■■■■□ 3.23
TSPAN3-206ENST00000559373 MAPKBP1O60336 1514 aa35.22■■■■□ 3.23
TSPAN3-206ENST00000559373 PTPRGP23470 1445 aa35.21■■■■□ 3.23
TSPAN3-206ENST00000559373 DIP2BQ9P265 1576 aa35.2■■■■□ 3.23
TSPAN3-206ENST00000559373 ABCC10Q5T3U5 1492 aa35.19■■■■□ 3.22
TSPAN3-206ENST00000559373 RAPGEF2Q9Y4G8 1499 aa35.19■■■■□ 3.22
TSPAN3-206ENST00000559373 CARMIL2Q6F5E8 1435 aa35.16■■■■□ 3.22
TSPAN3-206ENST00000559373 TNIKQ9UKE5 1360 aa35.13■■■■□ 3.21
TSPAN3-206ENST00000559373 DISP1Q96F81 1524 aa35.11■■■■□ 3.21
TSPAN3-206ENST00000559373 CTTNBP2Q8WZ74 1663 aa35.1■■■■□ 3.21
TSPAN3-206ENST00000559373 AEBP2Q6ZN18 517 aaPredicted RBP35.05■■■■□ 3.2
TSPAN3-206ENST00000559373 UGGT2Q9NYU1 1516 aa35.01■■■■□ 3.2
TSPAN3-206ENST00000559373 ABCC2Q92887 1545 aa35■■■■□ 3.19
TSPAN3-206ENST00000559373 KIAA0556O60303 1618 aa34.99■■■■□ 3.19
TSPAN3-206ENST00000559373 UACAQ9BZF9 1416 aa34.94■■■■□ 3.18
TSPAN3-206ENST00000559373 ASXL2Q76L83 1435 aa34.9■■■■□ 3.18
TSPAN3-206ENST00000559373 UHRF1BP1LA0JNW5 1464 aa34.9■■■■□ 3.18
TSPAN3-206ENST00000559373 KDM6BO15054 1643 aa34.88■■■■□ 3.17
TSPAN3-206ENST00000559373 ZCCHC11Q5TAX3 1644 aaKnown RBP34.88■■■■□ 3.17
TSPAN3-206ENST00000559373 PRXQ9BXM0 1461 aa34.83■■■■□ 3.17
TSPAN3-206ENST00000559373 PPRC1Q5VV67 1664 aaKnown RBP34.82■■■■□ 3.17
TSPAN3-206ENST00000559373 PLB1Q6P1J6 1458 aa34.8■■■■□ 3.16
TSPAN3-206ENST00000559373 KDM5BQ9UGL1 1544 aa34.78■■■■□ 3.16
TSPAN3-206ENST00000559373 GLI2P10070 1586 aa34.74■■■■□ 3.15
TSPAN3-206ENST00000559373 GOLGA3Q08378 1498 aa34.7■■■■□ 3.15
TSPAN3-206ENST00000559373 EPRSP07814 1512 aaKnown RBP34.68■■■■□ 3.14
TSPAN3-206ENST00000559373 MAP3K4Q9Y6R4 1608 aa34.67■■■■□ 3.14
TSPAN3-206ENST00000559373 P3H3Q8IVL6 736 aa34.66■■■■□ 3.14
TSPAN3-206ENST00000559373 ABCA8O94911 1581 aa34.64■■■■□ 3.14
TSPAN3-206ENST00000559373 CSRNP3Q8WYN3 585 aa34.63■■■■□ 3.13
TSPAN3-206ENST00000559373 FAM9AQ8IZU1 332 aaPredicted RBP34.58■■■■□ 3.13
TSPAN3-206ENST00000559373 ARID3CA6NKF2 412 aa34.56■■■■□ 3.12
TSPAN3-206ENST00000559373 WDR7Q9Y4E6 1490 aa34.56■■■■□ 3.12
TSPAN3-206ENST00000559373 RANGAP1P46060 587 aaPredicted RBP34.53■■■■□ 3.12
TSPAN3-206ENST00000559373 KCNH8Q96L42 1107 aa34.52■■■■□ 3.12
TSPAN3-206ENST00000559373 COL17A1Q9UMD9 1497 aaPredicted RBP34.5■■■■□ 3.11
TSPAN3-206ENST00000559373 SAMD9Q5K651 1589 aa34.46■■■■□ 3.11
TSPAN3-206ENST00000559373 KDM4FA0A1W2PPD8 638 aa34.46■■■■□ 3.11
TSPAN3-206ENST00000559373 CFAP43Q8NDM7 1665 aa34.43■■■■□ 3.1
TSPAN3-206ENST00000559373 TEX14Q8IWB6 1497 aa34.42■■■■□ 3.1
TSPAN3-206ENST00000559373 EEA1Q15075 1411 aa34.38■■■■□ 3.09
TSPAN3-206ENST00000559373 ATP10BO94823 1461 aa34.35■■■■□ 3.09
TSPAN3-206ENST00000559373 RAPGEF6Q8TEU7 1601 aa34.35■■■■□ 3.09
TSPAN3-206ENST00000559373 EHMT2Q96KQ7 1210 aa34.35■■■■□ 3.09
TSPAN3-206ENST00000559373 CD109Q6YHK3 1445 aa34.35■■■■□ 3.09
TSPAN3-206ENST00000559373 FHOD3Q2V2M9 1422 aa34.28■■■■□ 3.08
TSPAN3-206ENST00000559373 KIF21BO75037 1637 aa34.26■■■■□ 3.08
TSPAN3-206ENST00000559373 MAGI3Q5TCQ9 1506 aa34.25■■■■□ 3.07
TSPAN3-206ENST00000559373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.23■■■■□ 3.07
TSPAN3-206ENST00000559373 HNRNPUL2Q1KMD3 747 aaKnown RBP34.23■■■■□ 3.07
TSPAN3-206ENST00000559373 ADGRL1O94910 1474 aa34.21■■■■□ 3.07
TSPAN3-206ENST00000559373 CHIC1Q5VXU3 224 aa34.17■■■■□ 3.06
TSPAN3-206ENST00000559373 NUP153P49790 1475 aaKnown RBP34.16■■■■□ 3.06
TSPAN3-206ENST00000559373 ABCA9Q8IUA7 1624 aa34.15■■■■□ 3.06
TSPAN3-206ENST00000559373 UBTFP17480 764 aaKnown RBP34.06■■■■□ 3.04
TSPAN3-206ENST00000559373 EFCAB5A4FU69 1503 aa34.05■■■■□ 3.04
TSPAN3-206ENST00000559373 ARAP3Q8WWN8 1544 aa33.99■■■■□ 3.03
TSPAN3-206ENST00000559373 CDK13Q14004 1512 aaKnown RBP33.94■■■■□ 3.02
TSPAN3-206ENST00000559373 PLEKHD1A6NEE1 506 aa33.93■■■■□ 3.02
TSPAN3-206ENST00000559373 RAPGEF3O95398 923 aa33.93■■■■□ 3.02
TSPAN3-206ENST00000559373 ATP1B4Q9UN42 357 aaPredicted RBP33.9■■■■□ 3.02
TSPAN3-206ENST00000559373 TTC37Q6PGP7 1564 aa33.87■■■■□ 3.01
TSPAN3-206ENST00000559373 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.87■■■■□ 3.012e-7■■■■■ 47.7
TSPAN3-206ENST00000559373 FRMPD1Q5SYB0 1578 aa33.86■■■■□ 3.01
TSPAN3-206ENST00000559373 NEO1Q92859 1461 aa33.86■■■■□ 3.01
TSPAN3-206ENST00000559373 ARHGAP35Q9NRY4 1499 aa33.86■■■■□ 3.01
TSPAN3-206ENST00000559373 PHLDB1Q86UU1 1377 aa33.82■■■■□ 3
TSPAN3-206ENST00000559373 LRRIQ1Q96JM4 1722 aa33.82■■■■□ 3
TSPAN3-206ENST00000559373 RICTORQ6R327 1708 aa33.79■■■■□ 3
TSPAN3-206ENST00000559373 HECW1Q76N89 1606 aa33.78■■■■□ 3
TSPAN3-206ENST00000559373 HECW2Q9P2P5 1572 aa33.75■■■□□ 2.99
TSPAN3-206ENST00000559373 FANCAO15360 1455 aa33.74■■■□□ 2.99
TSPAN3-206ENST00000559373 CFAP74Q9C0B2 1584 aa33.73■■■□□ 2.99
TSPAN3-206ENST00000559373 FMN1Q68DA7 1419 aa33.73■■■□□ 2.99
TSPAN3-206ENST00000559373 AKNAQ7Z591 1439 aa33.73■■■□□ 2.99
TSPAN3-206ENST00000559373 KIF14Q15058 1648 aa33.68■■■□□ 2.98
TSPAN3-206ENST00000559373 ADAMTSL3P82987 1691 aa33.68■■■□□ 2.98
TSPAN3-206ENST00000559373 DENND4BO75064 1496 aaPredicted RBP33.67■■■□□ 2.98
TSPAN3-206ENST00000559373 MYO5CQ9NQX4 1742 aa33.67■■■□□ 2.98
TSPAN3-206ENST00000559373 BCORL1Q5H9F3 1711 aa33.65■■■□□ 2.98
TSPAN3-206ENST00000559373 ARID4BQ4LE39 1312 aaPredicted RBP33.63■■■□□ 2.97
TSPAN3-206ENST00000559373 ARHGEF40Q8TER5 1519 aa33.6■■■□□ 2.97
TSPAN3-206ENST00000559373 SIGLEC1Q9BZZ2 1709 aa33.59■■■□□ 2.97
TSPAN3-206ENST00000559373 MADDQ8WXG6 1647 aa33.58■■■□□ 2.97
TSPAN3-206ENST00000559373 PCF11O94913 1555 aaKnown RBP33.57■■■□□ 2.96
TSPAN3-206ENST00000559373 PLCH2O75038 1416 aa33.56■■■□□ 2.96
TSPAN3-206ENST00000559373 PTPRMP28827 1452 aa33.53■■■□□ 2.96
TSPAN3-206ENST00000559373 CDK11AQ9UQ88 783 aaPredicted RBP33.53■■■□□ 2.96
TSPAN3-206ENST00000559373 RIMS1Q86UR5 1692 aaKnown RBP33.52■■■□□ 2.96
TSPAN3-206ENST00000559373 SCAPERQ9BY12 1400 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms