RNA–Protein interactions for RNA: ENST00000559328.5

MARK3-219, Transcript of microtubule affinity regulating kinase 3, human

TSL 4

Gene MARK3, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-219	ENST00000559328	KIAA0586	Q9BVV6	1533 aa		33.82	■■■■□ 3
MARK3-219	ENST00000559328	SHROOM2	Q13796	1616 aa		33.76	■■■■□ 3
MARK3-219	ENST00000559328	IQGAP2	Q13576	1575 aa		33.74	■■■□□ 2.99
MARK3-219	ENST00000559328	GOLGA3	Q08378	1498 aa		33.72	■■■□□ 2.99
MARK3-219	ENST00000559328	EHMT2	Q96KQ7	1210 aa		33.68	■■■□□ 2.98
MARK3-219	ENST00000559328	ARHGEF11	O15085	1522 aa		33.68	■■■□□ 2.98
MARK3-219	ENST00000559328	JPH4	Q96JJ6	628 aa		33.67	■■■□□ 2.98
MARK3-219	ENST00000559328	RIMBP3C	A6NJZ7	1639 aa		33.67	■■■□□ 2.98
MARK3-219	ENST00000559328	RIMBP3B	A6NNM3	1639 aa		33.67	■■■□□ 2.98
MARK3-219	ENST00000559328	RIMBP3	Q9UFD9	1639 aa		33.67	■■■□□ 2.98
MARK3-219	ENST00000559328	ERCC6L2	Q5T890	1561 aa		33.59	■■■□□ 2.97
MARK3-219	ENST00000559328	PRG4	Q92954	1404 aa	Predicted RBP	33.58	■■■□□ 2.97
MARK3-219	ENST00000559328	UBTF	P17480	764 aa	Known RBP	33.57	■■■□□ 2.96
MARK3-219	ENST00000559328	UGGT2	Q9NYU1	1516 aa		33.55	■■■□□ 2.96
MARK3-219	ENST00000559328	DISP1	Q96F81	1524 aa		33.44	■■■□□ 2.94
MARK3-219	ENST00000559328	CARMIL2	Q6F5E8	1435 aa		33.44	■■■□□ 2.94
MARK3-219	ENST00000559328	ARAP1	Q96P48	1450 aa		33.44	■■■□□ 2.94
MARK3-219	ENST00000559328	KIAA0556	O60303	1618 aa		33.41	■■■□□ 2.94
MARK3-219	ENST00000559328	RANGAP1	P46060	587 aa	Predicted RBP	33.36	■■■□□ 2.93
MARK3-219	ENST00000559328	TNIK	Q9UKE5	1360 aa		33.35	■■■□□ 2.93
MARK3-219	ENST00000559328	LOC105371045	A0A1W2PR82	267 aa		33.35	■■■□□ 2.93
MARK3-219	ENST00000559328	SAMD9	Q5K651	1589 aa		33.34	■■■□□ 2.93
MARK3-219	ENST00000559328	CYB5RL	Q6IPT4	315 aa		33.31	■■■□□ 2.92
MARK3-219	ENST00000559328	EFCAB5	A4FU69	1503 aa		33.27	■■■□□ 2.92
MARK3-219	ENST00000559328	PTPRG	P23470	1445 aa		33.23	■■■□□ 2.91
MARK3-219	ENST00000559328	P3H3	Q8IVL6	736 aa		33.23	■■■□□ 2.91
MARK3-219	ENST00000559328	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.22	■■■□□ 2.91
MARK3-219	ENST00000559328	ARHGAP35	Q9NRY4	1499 aa		33.17	■■■□□ 2.9
MARK3-219	ENST00000559328	FHOD3	Q2V2M9	1422 aa		33.15	■■■□□ 2.9
MARK3-219	ENST00000559328	CLIP1	P30622	1438 aa		33.11	■■■□□ 2.89
MARK3-219	ENST00000559328	CEP162	Q5TB80	1403 aa		33.08	■■■□□ 2.89
MARK3-219	ENST00000559328	ADCY10	Q96PN6	1610 aa		33.06	■■■□□ 2.88
MARK3-219	ENST00000559328	UACA	Q9BZF9	1416 aa		33.03	■■■□□ 2.88
MARK3-219	ENST00000559328	ABCA8	O94911	1581 aa		33.01	■■■□□ 2.88
MARK3-219	ENST00000559328	PLB1	Q6P1J6	1458 aa		33.01	■■■□□ 2.88
MARK3-219	ENST00000559328	ABCC2	Q92887	1545 aa		32.99	■■■□□ 2.87
MARK3-219	ENST00000559328	UHRF1BP1L	A0JNW5	1464 aa		32.99	■■■□□ 2.87
MARK3-219	ENST00000559328	RAPGEF6	Q8TEU7	1601 aa		32.95	■■■□□ 2.87
MARK3-219	ENST00000559328	FMN1	Q68DA7	1419 aa		32.94	■■■□□ 2.86
MARK3-219	ENST00000559328	NPM1	P06748	294 aa	Known RBP eCLIP	32.85	■■■□□ 2.85
MARK3-219	ENST00000559328	KDM5B	Q9UGL1	1544 aa		32.82	■■■□□ 2.85
MARK3-219	ENST00000559328	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.82	■■■□□ 2.84
MARK3-219	ENST00000559328	NUP153	P49790	1475 aa	Known RBP	32.79	■■■□□ 2.84
MARK3-219	ENST00000559328	PCF11	O94913	1555 aa	Known RBP	32.78	■■■□□ 2.84
MARK3-219	ENST00000559328	HECW1	Q76N89	1606 aa		32.77	■■■□□ 2.84
MARK3-219	ENST00000559328	MAPKBP1	O60336	1514 aa		32.73	■■■□□ 2.83
MARK3-219	ENST00000559328	ARID3C	A6NKF2	412 aa		32.73	■■■□□ 2.83
MARK3-219	ENST00000559328	CASKIN1	Q8WXD9	1431 aa		32.73	■■■□□ 2.83
MARK3-219	ENST00000559328	ATP10B	O94823	1461 aa		32.73	■■■□□ 2.83
MARK3-219	ENST00000559328	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.71	■■■□□ 2.83
MARK3-219	ENST00000559328	LRRIQ1	Q96JM4	1722 aa		32.7	■■■□□ 2.83
MARK3-219	ENST00000559328	FYCO1	Q9BQS8	1478 aa		32.69	■■■□□ 2.82
MARK3-219	ENST00000559328	VPS8	Q8N3P4	1428 aa		32.65	■■■□□ 2.82
MARK3-219	ENST00000559328	EPRS	P07814	1512 aa	Known RBP	32.64	■■■□□ 2.82
MARK3-219	ENST00000559328	CDK13	Q14004	1512 aa	Known RBP	32.63	■■■□□ 2.81
MARK3-219	ENST00000559328	ASXL2	Q76L83	1435 aa		32.63	■■■□□ 2.81
MARK3-219	ENST00000559328	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.62	■■■□□ 2.81
MARK3-219	ENST00000559328	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.62	■■■□□ 2.81
MARK3-219	ENST00000559328	CCDC18	Q5T9S5	1454 aa		32.56	■■■□□ 2.8
MARK3-219	ENST00000559328	WDR7	Q9Y4E6	1490 aa		32.54	■■■□□ 2.8
MARK3-219	ENST00000559328	KIF13A	Q9H1H9	1805 aa		32.53	■■■□□ 2.8
MARK3-219	ENST00000559328	DIP2B	Q9P265	1576 aa		32.5	■■■□□ 2.79
MARK3-219	ENST00000559328	ABCC10	Q5T3U5	1492 aa		32.5	■■■□□ 2.79
MARK3-219	ENST00000559328	TRH	P20396	242 aa	Predicted RBP	32.48	■■■□□ 2.79
MARK3-219	ENST00000559328	PLEKHD1	A6NEE1	506 aa		32.46	■■■□□ 2.79
MARK3-219	ENST00000559328	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.43	■■■□□ 2.78
MARK3-219	ENST00000559328	CFAP43	Q8NDM7	1665 aa		32.43	■■■□□ 2.78
MARK3-219	ENST00000559328	FAM69C	Q0P6D2	419 aa		32.41	■■■□□ 2.78
MARK3-219	ENST00000559328	KCNH8	Q96L42	1107 aa		32.41	■■■□□ 2.78
MARK3-219	ENST00000559328	GLI2	P10070	1586 aa		32.41	■■■□□ 2.78
MARK3-219	ENST00000559328	TIAM1	Q13009	1591 aa		32.37	■■■□□ 2.77
MARK3-219	ENST00000559328	MAGI3	Q5TCQ9	1506 aa		32.36	■■■□□ 2.77
MARK3-219	ENST00000559328	TRO	Q12816	1431 aa	Predicted RBP	32.35	■■■□□ 2.77
MARK3-219	ENST00000559328	MAP3K1	Q13233	1512 aa		32.31	■■■□□ 2.76
MARK3-219	ENST00000559328	MAP3K4	Q9Y6R4	1608 aa		32.3	■■■□□ 2.76
MARK3-219	ENST00000559328	ABCA9	Q8IUA7	1624 aa		32.29	■■■□□ 2.76
MARK3-219	ENST00000559328	TSPOAP1	O95153	1857 aa		32.29	■■■□□ 2.76
MARK3-219	ENST00000559328	KIF14	Q15058	1648 aa		32.29	■■■□□ 2.76
MARK3-219	ENST00000559328	APLP2	Q06481	763 aa		32.26	■■■□□ 2.75
MARK3-219	ENST00000559328	MTUS2	Q5JR59	1369 aa		32.26	■■■□□ 2.75
MARK3-219	ENST00000559328	EHBP1L1	Q8N3D4	1523 aa		32.25	■■■□□ 2.75
MARK3-219	ENST00000559328	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.25	■■■□□ 2.75	5e-6	■□□□□ 9.5
MARK3-219	ENST00000559328	TTC37	Q6PGP7	1564 aa		32.22	■■■□□ 2.75
MARK3-219	ENST00000559328	LRRC9	Q6ZRR7	1453 aa		32.2	■■■□□ 2.75
MARK3-219	ENST00000559328	PPRC1	Q5VV67	1664 aa	Known RBP	32.2	■■■□□ 2.74
MARK3-219	ENST00000559328	CD109	Q6YHK3	1445 aa		32.19	■■■□□ 2.74
MARK3-219	ENST00000559328	KANK4	Q5T7N3	995 aa	Predicted RBP	32.15	■■■□□ 2.74
MARK3-219	ENST00000559328	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.14	■■■□□ 2.74
MARK3-219	ENST00000559328	MYO5C	Q9NQX4	1742 aa		32.14	■■■□□ 2.74
MARK3-219	ENST00000559328	CDC42BPA	Q5VT25	1732 aa		32.07	■■■□□ 2.72
MARK3-219	ENST00000559328	TEX14	Q8IWB6	1497 aa		32.07	■■■□□ 2.72
MARK3-219	ENST00000559328	NCOA2	Q15596	1464 aa		32.03	■■■□□ 2.72
MARK3-219	ENST00000559328	CDC42BPB	Q9Y5S2	1711 aa		32.03	■■■□□ 2.72
MARK3-219	ENST00000559328	PLCH2	O75038	1416 aa		32.03	■■■□□ 2.72
MARK3-219	ENST00000559328	PREX2	Q70Z35	1606 aa		32.03	■■■□□ 2.72
MARK3-219	ENST00000559328	ARAP3	Q8WWN8	1544 aa		32	■■■□□ 2.71
MARK3-219	ENST00000559328	CFAP74	Q9C0B2	1584 aa		31.98	■■■□□ 2.71
MARK3-219	ENST00000559328	CCNB3	Q8WWL7	1395 aa		31.98	■■■□□ 2.71
MARK3-219	ENST00000559328	ITSN2	Q9NZM3	1697 aa		31.98	■■■□□ 2.71
MARK3-219	ENST00000559328	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.97	■■■□□ 2.71

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