RNA–Protein interactions for RNA: ENST00000559300.5

SEMA4B-210, Transcript of semaphorin 4B, humanhuman

TSL 4

Gene SEMA4B, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-210ENST00000559300 PRXQ9BXM0 1461 aa30.38■■■□□ 2.45
SEMA4B-210ENST00000559300 CSRNP3Q8WYN3 585 aa30.37■■■□□ 2.45
SEMA4B-210ENST00000559300 JPH4Q96JJ6 628 aa30.37■■■□□ 2.45
SEMA4B-210ENST00000559300 SHROOM2Q13796 1616 aa30.36■■■□□ 2.45
SEMA4B-210ENST00000559300 ARAP1Q96P48 1450 aa30.35■■■□□ 2.45
SEMA4B-210ENST00000559300 CYB5RLQ6IPT4 315 aa30.32■■■□□ 2.44
SEMA4B-210ENST00000559300 PRG4Q92954 1404 aaPredicted RBP30.28■■■□□ 2.44
SEMA4B-210ENST00000559300 ERCC6L2Q5T890 1561 aa30.24■■■□□ 2.43
SEMA4B-210ENST00000559300 FAM9AQ8IZU1 332 aaPredicted RBP30.19■■■□□ 2.42
SEMA4B-210ENST00000559300 IQGAP2Q13576 1575 aa30.16■■■□□ 2.42
SEMA4B-210ENST00000559300 UGGT2Q9NYU1 1516 aa30.06■■■□□ 2.4
SEMA4B-210ENST00000559300 CARMIL2Q6F5E8 1435 aa30.06■■■□□ 2.4
SEMA4B-210ENST00000559300 KIF21BO75037 1637 aa30.02■■■□□ 2.4
SEMA4B-210ENST00000559300 DISP1Q96F81 1524 aa30■■■□□ 2.39
SEMA4B-210ENST00000559300 CTTNBP2Q8WZ74 1663 aa29.99■■■□□ 2.39
SEMA4B-210ENST00000559300 TNIKQ9UKE5 1360 aa29.97■■■□□ 2.39
SEMA4B-210ENST00000559300 PTPRGP23470 1445 aa29.95■■■□□ 2.38
SEMA4B-210ENST00000559300 GOLGA3Q08378 1498 aa29.91■■■□□ 2.38
SEMA4B-210ENST00000559300 KIAA0556O60303 1618 aa29.88■■■□□ 2.37
SEMA4B-210ENST00000559300 UBTFP17480 764 aaKnown RBP29.79■■■□□ 2.36
SEMA4B-210ENST00000559300 TTBK1Q5TCY1 1321 aaPredicted RBP29.77■■■□□ 2.36
SEMA4B-210ENST00000559300 ADCY10Q96PN6 1610 aa29.74■■■□□ 2.35
SEMA4B-210ENST00000559300 UACAQ9BZF9 1416 aa29.74■■■□□ 2.35
SEMA4B-210ENST00000559300 UHRF1BP1LA0JNW5 1464 aa29.74■■■□□ 2.35
SEMA4B-210ENST00000559300 SAMD9Q5K651 1589 aa29.73■■■□□ 2.35
SEMA4B-210ENST00000559300 NPM1P06748 294 aaKnown RBP eCLIP29.72■■■□□ 2.35
SEMA4B-210ENST00000559300 EHMT2Q96KQ7 1210 aa29.72■■■□□ 2.35
SEMA4B-210ENST00000559300 P3H3Q8IVL6 736 aa29.67■■■□□ 2.34
SEMA4B-210ENST00000559300 ABCC2Q92887 1545 aa29.66■■■□□ 2.34
SEMA4B-210ENST00000559300 TRHP20396 242 aaPredicted RBP29.64■■■□□ 2.34
SEMA4B-210ENST00000559300 EFCAB5A4FU69 1503 aa29.63■■■□□ 2.33
SEMA4B-210ENST00000559300 RANGAP1P46060 587 aaPredicted RBP29.63■■■□□ 2.33
SEMA4B-210ENST00000559300 PLB1Q6P1J6 1458 aa29.61■■■□□ 2.33
SEMA4B-210ENST00000559300 MAPKBP1O60336 1514 aa29.61■■■□□ 2.33
SEMA4B-210ENST00000559300 ABCA8O94911 1581 aa29.58■■■□□ 2.33
SEMA4B-210ENST00000559300 KDM5BQ9UGL1 1544 aa29.58■■■□□ 2.33
SEMA4B-210ENST00000559300 FHOD3Q2V2M9 1422 aa29.55■■■□□ 2.32
SEMA4B-210ENST00000559300 ARHGAP35Q9NRY4 1499 aa29.5■■■□□ 2.31
SEMA4B-210ENST00000559300 ABCC10Q5T3U5 1492 aa29.48■■■□□ 2.31
SEMA4B-210ENST00000559300 ASXL2Q76L83 1435 aa29.45■■■□□ 2.3
SEMA4B-210ENST00000559300 FAM69CQ0P6D2 419 aa29.4■■■□□ 2.3
SEMA4B-210ENST00000559300 ZCCHC11Q5TAX3 1644 aaKnown RBP29.4■■■□□ 2.3
SEMA4B-210ENST00000559300 FMN1Q68DA7 1419 aa29.39■■■□□ 2.3
SEMA4B-210ENST00000559300 RAPGEF6Q8TEU7 1601 aa29.39■■■□□ 2.3
SEMA4B-210ENST00000559300 ATP10BO94823 1461 aa29.37■■■□□ 2.29
SEMA4B-210ENST00000559300 DIP2BQ9P265 1576 aa29.36■■■□□ 2.29
SEMA4B-210ENST00000559300 CLIP1P30622 1438 aa29.36■■■□□ 2.29
SEMA4B-210ENST00000559300 NUP153P49790 1475 aaKnown RBP29.36■■■□□ 2.29
SEMA4B-210ENST00000559300 WDR7Q9Y4E6 1490 aa29.31■■■□□ 2.28
SEMA4B-210ENST00000559300 LOC105371045A0A1W2PR82 267 aa29.31■■■□□ 2.28
SEMA4B-210ENST00000559300 KIF13AQ9H1H9 1805 aa29.3■■■□□ 2.28
SEMA4B-210ENST00000559300 ARID3CA6NKF2 412 aa29.29■■■□□ 2.28
SEMA4B-210ENST00000559300 EPRSP07814 1512 aaKnown RBP29.28■■■□□ 2.28
SEMA4B-210ENST00000559300 GLI2P10070 1586 aa29.27■■■□□ 2.28
SEMA4B-210ENST00000559300 CEP162Q5TB80 1403 aa29.22■■■□□ 2.27
SEMA4B-210ENST00000559300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.2■■■□□ 2.26
SEMA4B-210ENST00000559300 HNRNPUL2Q1KMD3 747 aaKnown RBP29.2■■■□□ 2.26
SEMA4B-210ENST00000559300 CASKIN1Q8WXD9 1431 aa29.17■■■□□ 2.26
SEMA4B-210ENST00000559300 KCNH8Q96L42 1107 aa29.16■■■□□ 2.26
SEMA4B-210ENST00000559300 HECW1Q76N89 1606 aa29.15■■■□□ 2.26
SEMA4B-210ENST00000559300 PLEKHD1A6NEE1 506 aa29.14■■■□□ 2.26
SEMA4B-210ENST00000559300 ATP1B4Q9UN42 357 aaPredicted RBP29.13■■■□□ 2.25
SEMA4B-210ENST00000559300 CDK13Q14004 1512 aaKnown RBP29.09■■■□□ 2.25
SEMA4B-210ENST00000559300 MAP3K4Q9Y6R4 1608 aa29.08■■■□□ 2.25
SEMA4B-210ENST00000559300 FYCO1Q9BQS8 1478 aa29.07■■■□□ 2.24
SEMA4B-210ENST00000559300 PCF11O94913 1555 aaKnown RBP29.05■■■□□ 2.24
SEMA4B-210ENST00000559300 CDK11AQ9UQ88 783 aaPredicted RBP29.05■■■□□ 2.24
SEMA4B-210ENST00000559300 CD109Q6YHK3 1445 aa29.04■■■□□ 2.24
SEMA4B-210ENST00000559300 CCDC18Q5T9S5 1454 aa29.03■■■□□ 2.24
SEMA4B-210ENST00000559300 MAGI3Q5TCQ9 1506 aa29■■■□□ 2.23
SEMA4B-210ENST00000559300 TEX14Q8IWB6 1497 aa28.99■■■□□ 2.23
SEMA4B-210ENST00000559300 PPRC1Q5VV67 1664 aaKnown RBP28.99■■■□□ 2.23
SEMA4B-210ENST00000559300 CFAP43Q8NDM7 1665 aa28.99■■■□□ 2.23
SEMA4B-210ENST00000559300 ABCA9Q8IUA7 1624 aa28.98■■■□□ 2.23
SEMA4B-210ENST00000559300 TSPOAP1O95153 1857 aa28.95■■■□□ 2.23
SEMA4B-210ENST00000559300 TROQ12816 1431 aaPredicted RBP28.94■■■□□ 2.22
SEMA4B-210ENST00000559300 LRRIQ1Q96JM4 1722 aa28.91■■■□□ 2.22
SEMA4B-210ENST00000559300 VPS8Q8N3P4 1428 aa28.89■■■□□ 2.22
SEMA4B-210ENST00000559300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.88■■■□□ 2.212e-6■■■■■ 51.7
SEMA4B-210ENST00000559300 PHLDB1Q86UU1 1377 aa28.85■■■□□ 2.21
SEMA4B-210ENST00000559300 KDM6BO15054 1643 aa28.84■■■□□ 2.21
SEMA4B-210ENST00000559300 COL17A1Q9UMD9 1497 aaPredicted RBP28.81■■■□□ 2.2
SEMA4B-210ENST00000559300 TTC37Q6PGP7 1564 aa28.8■■■□□ 2.2
SEMA4B-210ENST00000559300 NEO1Q92859 1461 aa28.79■■■□□ 2.2
SEMA4B-210ENST00000559300 KIF14Q15058 1648 aa28.79■■■□□ 2.2
SEMA4B-210ENST00000559300 PLCH2O75038 1416 aa28.77■■■□□ 2.2
SEMA4B-210ENST00000559300 ARAP3Q8WWN8 1544 aa28.75■■■□□ 2.19
SEMA4B-210ENST00000559300 MTUS2Q5JR59 1369 aa28.72■■■□□ 2.19
SEMA4B-210ENST00000559300 FANCAO15360 1455 aa28.72■■■□□ 2.19
SEMA4B-210ENST00000559300 AKNAQ7Z591 1439 aa28.68■■■□□ 2.18
SEMA4B-210ENST00000559300 EFCAB2Q5VUJ9 269 aa28.67■■■□□ 2.18
SEMA4B-210ENST00000559300 MAP3K1Q13233 1512 aa28.67■■■□□ 2.18
SEMA4B-210ENST00000559300 TIAM1Q13009 1591 aa28.65■■■□□ 2.18
SEMA4B-210ENST00000559300 EHBP1L1Q8N3D4 1523 aa28.64■■■□□ 2.18
SEMA4B-210ENST00000559300 CFAP74Q9C0B2 1584 aa28.63■■■□□ 2.17
SEMA4B-210ENST00000559300 MYO5CQ9NQX4 1742 aa28.6■■■□□ 2.17
SEMA4B-210ENST00000559300 RAPGEF3O95398 923 aa28.58■■■□□ 2.17
SEMA4B-210ENST00000559300 DENND4BO75064 1496 aaPredicted RBP28.58■■■□□ 2.17
SEMA4B-210ENST00000559300 ARHGAP5Q13017 1502 aa28.58■■■□□ 2.17
SEMA4B-210ENST00000559300 GPATCH8Q9UKJ3 1502 aaKnown RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms