RNA–Protein interactions for RNA: ENST00000559074.5

SEMA4B-208, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 1,697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-208ENST00000559074 VPS8Q8N3P4 1428 aa24.66■■□□□ 1.54
SEMA4B-208ENST00000559074 SYNJ2O15056 1496 aa24.66■■□□□ 1.54
SEMA4B-208ENST00000559074 GRIN2AQ12879 1464 aa24.65■■□□□ 1.54
SEMA4B-208ENST00000559074 EFCAB5A4FU69 1503 aa24.62■■□□□ 1.53
SEMA4B-208ENST00000559074 IQGAP2Q13576 1575 aa24.57■■□□□ 1.52
SEMA4B-208ENST00000559074 SAMD9Q5K651 1589 aa24.56■■□□□ 1.52
SEMA4B-208ENST00000559074 CEP170Q5SW79 1584 aa24.52■■□□□ 1.52
SEMA4B-208ENST00000559074 CHMP7Q8WUX9 453 aaPredicted RBP24.5■■□□□ 1.51
SEMA4B-208ENST00000559074 KIAA0586Q9BVV6 1533 aa24.5■■□□□ 1.51
SEMA4B-208ENST00000559074 NUP160Q12769 1436 aa24.47■■□□□ 1.51
SEMA4B-208ENST00000559074 CHD1O14646 1710 aa24.47■■□□□ 1.51
SEMA4B-208ENST00000559074 UGGT2Q9NYU1 1516 aa24.45■■□□□ 1.5
SEMA4B-208ENST00000559074 FHOD3Q2V2M9 1422 aa24.44■■□□□ 1.5
SEMA4B-208ENST00000559074 FBLN2P98095 1184 aa24.42■■□□□ 1.5
SEMA4B-208ENST00000559074 PCF11O94913 1555 aaKnown RBP24.38■■□□□ 1.49
SEMA4B-208ENST00000559074 P3H3Q8IVL6 736 aa24.37■■□□□ 1.49
SEMA4B-208ENST00000559074 PPARGC1BQ86YN6 1023 aaKnown RBP24.35■■□□□ 1.49
SEMA4B-208ENST00000559074 KIAA0556O60303 1618 aa24.35■■□□□ 1.49
SEMA4B-208ENST00000559074 FMN1Q68DA7 1419 aa24.35■■□□□ 1.49
SEMA4B-208ENST00000559074 TRIM26Q12899 539 aaPredicted RBP24.34■■□□□ 1.49
SEMA4B-208ENST00000559074 APLP2Q06481 763 aa24.32■■□□□ 1.48
SEMA4B-208ENST00000559074 FYCO1Q9BQS8 1478 aa24.31■■□□□ 1.48
SEMA4B-208ENST00000559074 DISP1Q96F81 1524 aa24.31■■□□□ 1.48
SEMA4B-208ENST00000559074 CASKIN1Q8WXD9 1431 aa24.29■■□□□ 1.48
SEMA4B-208ENST00000559074 MAP3K1Q13233 1512 aa24.28■■□□□ 1.48
SEMA4B-208ENST00000559074 CFAP43Q8NDM7 1665 aa24.28■■□□□ 1.48
SEMA4B-208ENST00000559074 PCGF6Q9BYE7 350 aa24.27■■□□□ 1.48
SEMA4B-208ENST00000559074 TIAM1Q13009 1591 aa24.27■■□□□ 1.48
SEMA4B-208ENST00000559074 SHROOM2Q13796 1616 aa24.2■■□□□ 1.46
SEMA4B-208ENST00000559074 TTBK1Q5TCY1 1321 aaPredicted RBP24.19■■□□□ 1.46
SEMA4B-208ENST00000559074 JPH4Q96JJ6 628 aa24.18■■□□□ 1.46
SEMA4B-208ENST00000559074 LRRIQ1Q96JM4 1722 aa24.18■■□□□ 1.46
SEMA4B-208ENST00000559074 CARMIL2Q6F5E8 1435 aa24.18■■□□□ 1.46
SEMA4B-208ENST00000559074 CLASP1Q7Z460 1538 aa24.17■■□□□ 1.46
SEMA4B-208ENST00000559074 HECW1Q76N89 1606 aa24.17■■□□□ 1.46
SEMA4B-208ENST00000559074 KANK4Q5T7N3 995 aaPredicted RBP24.12■■□□□ 1.45
SEMA4B-208ENST00000559074 LRRC9Q6ZRR7 1453 aa24.11■■□□□ 1.45
SEMA4B-208ENST00000559074 RAPGEF6Q8TEU7 1601 aa24.09■■□□□ 1.45
SEMA4B-208ENST00000559074 ATP1B4Q9UN42 357 aaPredicted RBP24.09■■□□□ 1.45
SEMA4B-208ENST00000559074 PRG4Q92954 1404 aaPredicted RBP24.09■■□□□ 1.45
SEMA4B-208ENST00000559074 CCDC18Q5T9S5 1454 aa24.08■■□□□ 1.45
SEMA4B-208ENST00000559074 EPRSP07814 1512 aaKnown RBP24.02■■□□□ 1.44
SEMA4B-208ENST00000559074 NUP153P49790 1475 aaKnown RBP23.99■■□□□ 1.43
SEMA4B-208ENST00000559074 ABCA8O94911 1581 aa23.98■■□□□ 1.43
SEMA4B-208ENST00000559074 PLB1Q6P1J6 1458 aa23.98■■□□□ 1.43
SEMA4B-208ENST00000559074 ERCC6L2Q5T890 1561 aa23.98■■□□□ 1.43
SEMA4B-208ENST00000559074 EHBP1L1Q8N3D4 1523 aa23.97■■□□□ 1.43
SEMA4B-208ENST00000559074 CDK13Q14004 1512 aaKnown RBP23.97■■□□□ 1.43
SEMA4B-208ENST00000559074 MAGI3Q5TCQ9 1506 aa23.93■■□□□ 1.42
SEMA4B-208ENST00000559074 MTUS2Q5JR59 1369 aa23.92■■□□□ 1.42
SEMA4B-208ENST00000559074 PTPRGP23470 1445 aa23.91■■□□□ 1.42
SEMA4B-208ENST00000559074 SUPT6HQ7KZ85 1726 aaKnown RBP23.91■■□□□ 1.42
SEMA4B-208ENST00000559074 RRBP1Q9P2E9 1410 aaKnown RBP23.91■■□□□ 1.42
SEMA4B-208ENST00000559074 PHLDB1Q86UU1 1377 aa23.86■■□□□ 1.41
SEMA4B-208ENST00000559074 OSCARQ8IYS5 282 aa23.84■■□□□ 1.41
SEMA4B-208ENST00000559074 ARHGEF11O15085 1522 aa23.83■■□□□ 1.41
SEMA4B-208ENST00000559074 NCOA2Q15596 1464 aa23.83■■□□□ 1.4
SEMA4B-208ENST00000559074 ARID3CA6NKF2 412 aa23.82■■□□□ 1.4
SEMA4B-208ENST00000559074 UACAQ9BZF9 1416 aa23.81■■□□□ 1.4
SEMA4B-208ENST00000559074 CCNB3Q8WWL7 1395 aa23.81■■□□□ 1.4
SEMA4B-208ENST00000559074 ABCC2Q92887 1545 aa23.79■■□□□ 1.4
SEMA4B-208ENST00000559074 ATP10BO94823 1461 aa23.77■■□□□ 1.4
SEMA4B-208ENST00000559074 ADCY10Q96PN6 1610 aa23.75■■□□□ 1.39
SEMA4B-208ENST00000559074 CDK11AQ9UQ88 783 aaPredicted RBP23.74■■□□□ 1.39
SEMA4B-208ENST00000559074 TROQ12816 1431 aaPredicted RBP23.74■■□□□ 1.39
SEMA4B-208ENST00000559074 MYOM3Q5VTT5 1437 aa23.74■■□□□ 1.39
SEMA4B-208ENST00000559074 UHRF1BP1LA0JNW5 1464 aa23.73■■□□□ 1.39
SEMA4B-208ENST00000559074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.73■■□□□ 1.39
SEMA4B-208ENST00000559074 HNRNPUL2Q1KMD3 747 aaKnown RBP23.73■■□□□ 1.39
SEMA4B-208ENST00000559074 FGD6Q6ZV73 1430 aa23.72■■□□□ 1.39
SEMA4B-208ENST00000559074 KIF14Q15058 1648 aa23.67■■□□□ 1.38
SEMA4B-208ENST00000559074 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.67■■□□□ 1.38
SEMA4B-208ENST00000559074 ZCCHC11Q5TAX3 1644 aaKnown RBP23.64■■□□□ 1.38
SEMA4B-208ENST00000559074 PTPN23Q9H3S7 1636 aa23.64■■□□□ 1.37
SEMA4B-208ENST00000559074 KDM5BQ9UGL1 1544 aa23.62■■□□□ 1.37
SEMA4B-208ENST00000559074 ITSN2Q9NZM3 1697 aa23.62■■□□□ 1.37
SEMA4B-208ENST00000559074 MIA2Q96PC5 1412 aa23.61■■□□□ 1.37
SEMA4B-208ENST00000559074 TCOF1Q13428 1488 aaKnown RBP23.6■■□□□ 1.37
SEMA4B-208ENST00000559074 PLEKHD1A6NEE1 506 aa23.6■■□□□ 1.37
SEMA4B-208ENST00000559074 FAM50AQ14320 339 aaKnown RBP23.58■■□□□ 1.37
SEMA4B-208ENST00000559074 ABCC10Q5T3U5 1492 aa23.56■■□□□ 1.36
SEMA4B-208ENST00000559074 CDC42BPAQ5VT25 1732 aa23.53■■□□□ 1.36
SEMA4B-208ENST00000559074 HRCP23327 699 aa23.52■■□□□ 1.36
SEMA4B-208ENST00000559074 GPATCH8Q9UKJ3 1502 aaKnown RBP23.52■■□□□ 1.35
SEMA4B-208ENST00000559074 ITGAEP38570 1179 aa23.5■■□□□ 1.35
SEMA4B-208ENST00000559074 PREX2Q70Z35 1606 aa23.46■■□□□ 1.35
SEMA4B-208ENST00000559074 TTC37Q6PGP7 1564 aa23.46■■□□□ 1.35
SEMA4B-208ENST00000559074 RIMBP3CA6NJZ7 1639 aa23.45■■□□□ 1.35
SEMA4B-208ENST00000559074 RIMBP3BA6NNM3 1639 aa23.45■■□□□ 1.35
SEMA4B-208ENST00000559074 RIMBP3Q9UFD9 1639 aa23.45■■□□□ 1.35
SEMA4B-208ENST00000559074 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.45■■□□□ 1.34
SEMA4B-208ENST00000559074 CAMSAP2Q08AD1 1489 aa23.43■■□□□ 1.34
SEMA4B-208ENST00000559074 DNMT1P26358 1616 aaKnown RBP23.42■■□□□ 1.34
SEMA4B-208ENST00000559074 PTPRKQ15262 1439 aa23.41■■□□□ 1.34
SEMA4B-208ENST00000559074 MYO5CQ9NQX4 1742 aa23.41■■□□□ 1.34
SEMA4B-208ENST00000559074 CDC42BPBQ9Y5S2 1711 aa23.41■■□□□ 1.34
SEMA4B-208ENST00000559074 WDR7Q9Y4E6 1490 aa23.4■■□□□ 1.34
SEMA4B-208ENST00000559074 CFDP1Q9UEE9 299 aaPredicted RBP23.4■■□□□ 1.34
SEMA4B-208ENST00000559074 CCER1Q8TC90 406 aaPredicted RBP23.37■■□□□ 1.33
SEMA4B-208ENST00000559074 SETD5Q9C0A6 1442 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms