RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 PRXQ9BXM0 1461 aa20.52■□□□□ 0.88
GABPB1-208ENST00000558970 KIF21BO75037 1637 aa20.51■□□□□ 0.87
GABPB1-208ENST00000558970 CTTNBP2Q8WZ74 1663 aa20.51■□□□□ 0.87
GABPB1-208ENST00000558970 CLASP1Q7Z460 1538 aa20.48■□□□□ 0.87
GABPB1-208ENST00000558970 NUP160Q12769 1436 aa20.46■□□□□ 0.87
GABPB1-208ENST00000558970 CYB5RLQ6IPT4 315 aa20.46■□□□□ 0.87
GABPB1-208ENST00000558970 IQGAP2Q13576 1575 aa20.39■□□□□ 0.85
GABPB1-208ENST00000558970 GOLGA3Q08378 1498 aa20.39■□□□□ 0.85
GABPB1-208ENST00000558970 KIAA0586Q9BVV6 1533 aa20.36■□□□□ 0.85
GABPB1-208ENST00000558970 SHROOM2Q13796 1616 aa20.35■□□□□ 0.85
GABPB1-208ENST00000558970 UBTFP17480 764 aaKnown RBP20.34■□□□□ 0.85
GABPB1-208ENST00000558970 ARAP1Q96P48 1450 aa20.33■□□□□ 0.85
GABPB1-208ENST00000558970 RANGAP1P46060 587 aaPredicted RBP20.33■□□□□ 0.85
GABPB1-208ENST00000558970 ERCC6L2Q5T890 1561 aa20.31■□□□□ 0.84
GABPB1-208ENST00000558970 TRHP20396 242 aaPredicted RBP20.28■□□□□ 0.84
GABPB1-208ENST00000558970 LOC105371045A0A1W2PR82 267 aa20.26■□□□□ 0.83
GABPB1-208ENST00000558970 JPH4Q96JJ6 628 aa20.26■□□□□ 0.83
GABPB1-208ENST00000558970 PRG4Q92954 1404 aaPredicted RBP20.26■□□□□ 0.83
GABPB1-208ENST00000558970 UGGT2Q9NYU1 1516 aa20.21■□□□□ 0.83
GABPB1-208ENST00000558970 KIAA0556O60303 1618 aa20.2■□□□□ 0.82
GABPB1-208ENST00000558970 TTBK1Q5TCY1 1321 aaPredicted RBP20.2■□□□□ 0.82
GABPB1-208ENST00000558970 DISP1Q96F81 1524 aa20.17■□□□□ 0.82
GABPB1-208ENST00000558970 P3H3Q8IVL6 736 aa20.16■□□□□ 0.82
GABPB1-208ENST00000558970 CARMIL2Q6F5E8 1435 aa20.15■□□□□ 0.82
GABPB1-208ENST00000558970 SAMD9Q5K651 1589 aa20.15■□□□□ 0.82
GABPB1-208ENST00000558970 TNIKQ9UKE5 1360 aa20.13■□□□□ 0.81
GABPB1-208ENST00000558970 EFCAB5A4FU69 1503 aa20.08■□□□□ 0.81
GABPB1-208ENST00000558970 FHOD3Q2V2M9 1422 aa20.08■□□□□ 0.8
GABPB1-208ENST00000558970 ARHGAP35Q9NRY4 1499 aa20.05■□□□□ 0.8
GABPB1-208ENST00000558970 CEP162Q5TB80 1403 aa20.05■□□□□ 0.8
GABPB1-208ENST00000558970 CLIP1P30622 1438 aa20.04■□□□□ 0.8
GABPB1-208ENST00000558970 PTPRGP23470 1445 aa20.02■□□□□ 0.8
GABPB1-208ENST00000558970 ADCY10Q96PN6 1610 aa19.97■□□□□ 0.79
GABPB1-208ENST00000558970 PLB1Q6P1J6 1458 aa19.95■□□□□ 0.78
GABPB1-208ENST00000558970 RAPGEF6Q8TEU7 1601 aa19.94■□□□□ 0.78
GABPB1-208ENST00000558970 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
GABPB1-208ENST00000558970 ABCA8O94911 1581 aa19.91■□□□□ 0.78
GABPB1-208ENST00000558970 UACAQ9BZF9 1416 aa19.9■□□□□ 0.78
GABPB1-208ENST00000558970 ABCC2Q92887 1545 aa19.9■□□□□ 0.78
GABPB1-208ENST00000558970 ARID3CA6NKF2 412 aa19.89■□□□□ 0.77
GABPB1-208ENST00000558970 PCF11O94913 1555 aaKnown RBP19.89■□□□□ 0.77
GABPB1-208ENST00000558970 ATP1B4Q9UN42 357 aaPredicted RBP19.87■□□□□ 0.77
GABPB1-208ENST00000558970 FMN1Q68DA7 1419 aa19.86■□□□□ 0.77
GABPB1-208ENST00000558970 LRRIQ1Q96JM4 1722 aa19.86■□□□□ 0.77
GABPB1-208ENST00000558970 ZCCHC11Q5TAX3 1644 aaKnown RBP19.86■□□□□ 0.77
GABPB1-208ENST00000558970 HECW1Q76N89 1606 aa19.84■□□□□ 0.77
GABPB1-208ENST00000558970 UHRF1BP1LA0JNW5 1464 aa19.82■□□□□ 0.76
GABPB1-208ENST00000558970 NUP153P49790 1475 aaKnown RBP19.8■□□□□ 0.76
GABPB1-208ENST00000558970 NPM1P06748 294 aaKnown RBP eCLIP19.78■□□□□ 0.76
GABPB1-208ENST00000558970 CDK13Q14004 1512 aaKnown RBP19.77■□□□□ 0.76
GABPB1-208ENST00000558970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.77■□□□□ 0.76
GABPB1-208ENST00000558970 HNRNPUL2Q1KMD3 747 aaKnown RBP19.77■□□□□ 0.76
GABPB1-208ENST00000558970 KDM5BQ9UGL1 1544 aa19.76■□□□□ 0.75
GABPB1-208ENST00000558970 FYCO1Q9BQS8 1478 aa19.75■□□□□ 0.75
GABPB1-208ENST00000558970 VPS8Q8N3P4 1428 aa19.75■□□□□ 0.75
GABPB1-208ENST00000558970 CASKIN1Q8WXD9 1431 aa19.75■□□□□ 0.75
GABPB1-208ENST00000558970 ATP10BO94823 1461 aa19.73■□□□□ 0.75
GABPB1-208ENST00000558970 EPRSP07814 1512 aaKnown RBP19.71■□□□□ 0.75
GABPB1-208ENST00000558970 MAPKBP1O60336 1514 aa19.68■□□□□ 0.74
GABPB1-208ENST00000558970 ASXL2Q76L83 1435 aa19.68■□□□□ 0.74
GABPB1-208ENST00000558970 CFAP43Q8NDM7 1665 aa19.67■□□□□ 0.74
GABPB1-208ENST00000558970 KIF13AQ9H1H9 1805 aa19.66■□□□□ 0.74
GABPB1-208ENST00000558970 CCDC18Q5T9S5 1454 aa19.66■□□□□ 0.74
GABPB1-208ENST00000558970 WDR7Q9Y4E6 1490 aa19.62■□□□□ 0.73
GABPB1-208ENST00000558970 DIP2BQ9P265 1576 aa19.61■□□□□ 0.73
GABPB1-208ENST00000558970 TIAM1Q13009 1591 aa19.61■□□□□ 0.73
GABPB1-208ENST00000558970 KCNH8Q96L42 1107 aa19.6■□□□□ 0.73
GABPB1-208ENST00000558970 TSPOAP1O95153 1857 aa19.6■□□□□ 0.73
GABPB1-208ENST00000558970 MAGI3Q5TCQ9 1506 aa19.6■□□□□ 0.73
GABPB1-208ENST00000558970 KIF14Q15058 1648 aa19.58■□□□□ 0.72
GABPB1-208ENST00000558970 ABCC10Q5T3U5 1492 aa19.56■□□□□ 0.72
GABPB1-208ENST00000558970 PLEKHD1A6NEE1 506 aa19.56■□□□□ 0.72
GABPB1-208ENST00000558970 FAM69CQ0P6D2 419 aa19.55■□□□□ 0.72
GABPB1-208ENST00000558970 APLP2Q06481 763 aa19.54■□□□□ 0.72
GABPB1-208ENST00000558970 CDK11AQ9UQ88 783 aaPredicted RBP19.53■□□□□ 0.72
GABPB1-208ENST00000558970 TTC37Q6PGP7 1564 aa19.52■□□□□ 0.71
GABPB1-208ENST00000558970 TROQ12816 1431 aaPredicted RBP19.51■□□□□ 0.71
GABPB1-208ENST00000558970 MTUS2Q5JR59 1369 aa19.51■□□□□ 0.71
GABPB1-208ENST00000558970 EHBP1L1Q8N3D4 1523 aa19.51■□□□□ 0.71
GABPB1-208ENST00000558970 MAP3K4Q9Y6R4 1608 aa19.49■□□□□ 0.71
GABPB1-208ENST00000558970 ABCA9Q8IUA7 1624 aa19.48■□□□□ 0.71
GABPB1-208ENST00000558970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.48■□□□□ 0.712e-9■■■■■ 40.7
GABPB1-208ENST00000558970 PPARGC1BQ86YN6 1023 aaKnown RBP19.48■□□□□ 0.71
GABPB1-208ENST00000558970 GLI2P10070 1586 aa19.48■□□□□ 0.71
GABPB1-208ENST00000558970 KANK4Q5T7N3 995 aaPredicted RBP19.47■□□□□ 0.71
GABPB1-208ENST00000558970 SUPT6HQ7KZ85 1726 aaKnown RBP19.47■□□□□ 0.71
GABPB1-208ENST00000558970 MYO5CQ9NQX4 1742 aa19.47■□□□□ 0.71
GABPB1-208ENST00000558970 LRRC9Q6ZRR7 1453 aa19.47■□□□□ 0.71
GABPB1-208ENST00000558970 MAP3K1Q13233 1512 aa19.46■□□□□ 0.71
GABPB1-208ENST00000558970 PPRC1Q5VV67 1664 aaKnown RBP19.44■□□□□ 0.7
GABPB1-208ENST00000558970 CDC42BPAQ5VT25 1732 aa19.43■□□□□ 0.7
GABPB1-208ENST00000558970 CD109Q6YHK3 1445 aa19.4■□□□□ 0.7
GABPB1-208ENST00000558970 CDC42BPBQ9Y5S2 1711 aa19.39■□□□□ 0.7
GABPB1-208ENST00000558970 NCOA2Q15596 1464 aa19.38■□□□□ 0.69
GABPB1-208ENST00000558970 PREX2Q70Z35 1606 aa19.38■□□□□ 0.69
GABPB1-208ENST00000558970 ITSN2Q9NZM3 1697 aa19.37■□□□□ 0.69
GABPB1-208ENST00000558970 ARHGAP5Q13017 1502 aa19.35■□□□□ 0.69
GABPB1-208ENST00000558970 KDM4FA0A1W2PPD8 638 aa19.34■□□□□ 0.69
GABPB1-208ENST00000558970 CCNB3Q8WWL7 1395 aa19.32■□□□□ 0.68
GABPB1-208ENST00000558970 CFAP74Q9C0B2 1584 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms