RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 FHAD1B1AJZ9 1412 aa9.67□□□□□ -0.86
AC087516.2-201ENST00000558963 FYCO1Q9BQS8 1478 aa9.67□□□□□ -0.86
AC087516.2-201ENST00000558963 CENPBP07199 599 aaPredicted RBP9.66□□□□□ -0.86
AC087516.2-201ENST00000558963 DIEXFQ68CQ4 756 aaKnown RBP9.66□□□□□ -0.86
AC087516.2-201ENST00000558963 EHMT2Q96KQ7 1210 aa9.66□□□□□ -0.86
AC087516.2-201ENST00000558963 NESP48681 1621 aa9.66□□□□□ -0.86
AC087516.2-201ENST00000558963 NEUROD1Q13562 356 aa9.66□□□□□ -0.86
AC087516.2-201ENST00000558963 SAMD9Q5K651 1589 aa9.66□□□□□ -0.86
AC087516.2-201ENST00000558963 TOPBP1Q92547 1522 aa9.66□□□□□ -0.86
AC087516.2-201ENST00000558963 MYT1Q01538 1121 aa9.64□□□□□ -0.87
AC087516.2-201ENST00000558963 ZNF316A6NFI3 1004 aaPredicted RBP9.64□□□□□ -0.87
AC087516.2-201ENST00000558963 DHX57Q6P158 1386 aaKnown RBP9.63□□□□□ -0.87
AC087516.2-201ENST00000558963 APLP2Q06481 763 aa9.63□□□□□ -0.87
AC087516.2-201ENST00000558963 LRRC9Q6ZRR7 1453 aa9.63□□□□□ -0.87
AC087516.2-201ENST00000558963 CARMIL1Q5VZK9 1371 aa9.63□□□□□ -0.87
AC087516.2-201ENST00000558963 POLA1P09884 1462 aaPredicted RBP9.63□□□□□ -0.87
AC087516.2-201ENST00000558963 PCF11O94913 1555 aaKnown RBP9.63□□□□□ -0.87
AC087516.2-201ENST00000558963 IFT140Q96RY7 1462 aa9.61□□□□□ -0.87
AC087516.2-201ENST00000558963 CCNB3Q8WWL7 1395 aa9.61□□□□□ -0.87
AC087516.2-201ENST00000558963 CASKIN1Q8WXD9 1431 aa9.6□□□□□ -0.87
AC087516.2-201ENST00000558963 SNAPC4Q5SXM2 1469 aa9.57□□□□□ -0.88
AC087516.2-201ENST00000558963 TARBP1Q13395 1621 aaKnown RBP9.57□□□□□ -0.88
AC087516.2-201ENST00000558963 GTF3C3Q9Y5Q9 886 aa9.56□□□□□ -0.88
AC087516.2-201ENST00000558963 MAPKBP1O60336 1514 aa9.56□□□□□ -0.88
AC087516.2-201ENST00000558963 URB2Q14146 1524 aaKnown RBP9.56□□□□□ -0.88
AC087516.2-201ENST00000558963 PHF23Q9BUL5 403 aaPredicted RBP9.56□□□□□ -0.88
AC087516.2-201ENST00000558963 FMN1Q68DA7 1419 aa9.55□□□□□ -0.88
AC087516.2-201ENST00000558963 RIMBP3CA6NJZ7 1639 aa9.55□□□□□ -0.88
AC087516.2-201ENST00000558963 RIMBP3BA6NNM3 1639 aa9.55□□□□□ -0.88
AC087516.2-201ENST00000558963 RIMBP3Q9UFD9 1639 aa9.55□□□□□ -0.88
AC087516.2-201ENST00000558963 ARHGEF11O15085 1522 aa9.55□□□□□ -0.88
AC087516.2-201ENST00000558963 LRRIQ1Q96JM4 1722 aa9.54□□□□□ -0.88
AC087516.2-201ENST00000558963 PBRM1Q86U86 1689 aa9.53□□□□□ -0.88
AC087516.2-201ENST00000558963 KANK4Q5T7N3 995 aaPredicted RBP9.53□□□□□ -0.88
AC087516.2-201ENST00000558963 TIMELESSQ9UNS1 1208 aa9.52□□□□□ -0.89
AC087516.2-201ENST00000558963 GRIN2BQ13224 1484 aa9.52□□□□□ -0.89
AC087516.2-201ENST00000558963 EHBP1L1Q8N3D4 1523 aa9.51□□□□□ -0.89
AC087516.2-201ENST00000558963 SETD5Q9C0A6 1442 aa9.5□□□□□ -0.89
AC087516.2-201ENST00000558963 AKNAQ7Z591 1439 aa9.5□□□□□ -0.89
AC087516.2-201ENST00000558963 SUPT6HQ7KZ85 1726 aaKnown RBP9.5□□□□□ -0.89
AC087516.2-201ENST00000558963 CCDC18Q5T9S5 1454 aa9.49□□□□□ -0.89
AC087516.2-201ENST00000558963 GCC2Q8IWJ2 1684 aa9.49□□□□□ -0.89
AC087516.2-201ENST00000558963 ADAMTS12P58397 1594 aa9.49□□□□□ -0.89
AC087516.2-201ENST00000558963 RAD54L2Q9Y4B4 1467 aa9.49□□□□□ -0.89
AC087516.2-201ENST00000558963 EIF4G3O43432 1585 aaKnown RBP9.49□□□□□ -0.89
AC087516.2-201ENST00000558963 CLASP1Q7Z460 1538 aa9.48□□□□□ -0.89
AC087516.2-201ENST00000558963 TCOF1Q13428 1488 aaKnown RBP9.48□□□□□ -0.89
AC087516.2-201ENST00000558963 GAPVD1Q14C86 1478 aa9.48□□□□□ -0.89
AC087516.2-201ENST00000558963 HNRNPUL2Q1KMD3 747 aaKnown RBP9.48□□□□□ -0.89
AC087516.2-201ENST00000558963 PHLDB1Q86UU1 1377 aa9.47□□□□□ -0.89
AC087516.2-201ENST00000558963 HECW1Q76N89 1606 aa9.47□□□□□ -0.89
AC087516.2-201ENST00000558963 UGGT2Q9NYU1 1516 aa9.47□□□□□ -0.89
AC087516.2-201ENST00000558963 RAB3GAP2Q9H2M9 1393 aa9.46□□□□□ -0.89
AC087516.2-201ENST00000558963 CHD1O14646 1710 aa9.46□□□□□ -0.9
AC087516.2-201ENST00000558963 FGD6Q6ZV73 1430 aa9.45□□□□□ -0.9
AC087516.2-201ENST00000558963 HFM1A2PYH4 1435 aa9.44□□□□□ -0.9
AC087516.2-201ENST00000558963 PTPN23Q9H3S7 1636 aa9.44□□□□□ -0.9
AC087516.2-201ENST00000558963 IQGAP2Q13576 1575 aa9.43□□□□□ -0.9
AC087516.2-201ENST00000558963 FHOD3Q2V2M9 1422 aa9.42□□□□□ -0.9
AC087516.2-201ENST00000558963 MAGI1Q96QZ7 1491 aaPredicted RBP9.42□□□□□ -0.9
AC087516.2-201ENST00000558963 TTBK1Q5TCY1 1321 aaPredicted RBP9.41□□□□□ -0.9
AC087516.2-201ENST00000558963 MYOM3Q5VTT5 1437 aa9.41□□□□□ -0.9
AC087516.2-201ENST00000558963 MIER1Q8N108 512 aa9.41□□□□□ -0.9
AC087516.2-201ENST00000558963 UACAQ9BZF9 1416 aa9.4□□□□□ -0.9
AC087516.2-201ENST00000558963 OSCARQ8IYS5 282 aa9.39□□□□□ -0.91
AC087516.2-201ENST00000558963 MIA2Q96PC5 1412 aa9.39□□□□□ -0.91
AC087516.2-201ENST00000558963 NCOA2Q15596 1464 aa9.39□□□□□ -0.91
AC087516.2-201ENST00000558963 ADCY10Q96PN6 1610 aa9.38□□□□□ -0.91
AC087516.2-201ENST00000558963 SHROOM2Q13796 1616 aa9.37□□□□□ -0.91
AC087516.2-201ENST00000558963 MAGI3Q5TCQ9 1506 aa9.36□□□□□ -0.91
AC087516.2-201ENST00000558963 KDM5BQ9UGL1 1544 aa9.36□□□□□ -0.91
AC087516.2-201ENST00000558963 KIAA0556O60303 1618 aa9.36□□□□□ -0.91
AC087516.2-201ENST00000558963 NAIPQ13075 1403 aa9.35□□□□□ -0.91
AC087516.2-201ENST00000558963 EPRSP07814 1512 aaKnown RBP9.34□□□□□ -0.91
AC087516.2-201ENST00000558963 POLR1AO95602 1720 aaPredicted RBP9.34□□□□□ -0.91
AC087516.2-201ENST00000558963 DNMT1P26358 1616 aaKnown RBP9.33□□□□□ -0.92
AC087516.2-201ENST00000558963 KIAA0586Q9BVV6 1533 aa9.33□□□□□ -0.92
AC087516.2-201ENST00000558963 ITSN2Q9NZM3 1697 aa9.33□□□□□ -0.92
AC087516.2-201ENST00000558963 ROCK1Q13464 1354 aa9.32□□□□□ -0.92
AC087516.2-201ENST00000558963 CROCC2H7BZ55 1655 aa9.31□□□□□ -0.92
AC087516.2-201ENST00000558963 ADGBQ8N7X0 1667 aa9.31□□□□□ -0.92
AC087516.2-201ENST00000558963 MTUS2Q5JR59 1369 aa9.31□□□□□ -0.92
AC087516.2-201ENST00000558963 RAPGEF6Q8TEU7 1601 aa9.31□□□□□ -0.92
AC087516.2-201ENST00000558963 PTPRKQ15262 1439 aa9.31□□□□□ -0.92
AC087516.2-201ENST00000558963 YTHDC1Q96MU7 727 aaKnown RBP9.29□□□□□ -0.92
AC087516.2-201ENST00000558963 DISP1Q96F81 1524 aa9.29□□□□□ -0.92
AC087516.2-201ENST00000558963 TDRD9Q8NDG6 1382 aaKnown RBP9.29□□□□□ -0.92
AC087516.2-201ENST00000558963 SYNJ2O15056 1496 aa9.28□□□□□ -0.92
AC087516.2-201ENST00000558963 RANGAP1P46060 587 aaPredicted RBP9.28□□□□□ -0.92
AC087516.2-201ENST00000558963 DENND4BO75064 1496 aaPredicted RBP9.27□□□□□ -0.93
AC087516.2-201ENST00000558963 GRIN2AQ12879 1464 aa9.27□□□□□ -0.93
AC087516.2-201ENST00000558963 ADGRL2O95490 1459 aa9.26□□□□□ -0.93
AC087516.2-201ENST00000558963 PPP1R15AO75807 674 aaPredicted RBP9.26□□□□□ -0.93
AC087516.2-201ENST00000558963 CCER2I3L3R5 266 aa9.25□□□□□ -0.93
AC087516.2-201ENST00000558963 ZNF608Q9ULD9 1512 aaPredicted RBP9.24□□□□□ -0.93
AC087516.2-201ENST00000558963 NUP153P49790 1475 aaKnown RBP9.24□□□□□ -0.93
AC087516.2-201ENST00000558963 NUP160Q12769 1436 aa9.23□□□□□ -0.93
AC087516.2-201ENST00000558963 SUPT16HQ9Y5B9 1047 aaKnown RBP9.23□□□□□ -0.93
AC087516.2-201ENST00000558963 SHANK2Q9UPX8 1470 aa9.23□□□□□ -0.93
AC087516.2-201ENST00000558963 KDM5DQ9BY66 1539 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms