RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 CARMIL1Q5VZK9 1371 aa19.31■□□□□ 0.68
BMP4-204ENST00000558961 PRG4Q92954 1404 aaPredicted RBP19.27■□□□□ 0.68
BMP4-204ENST00000558961 JPH4Q96JJ6 628 aa19.25■□□□□ 0.67
BMP4-204ENST00000558961 IQGAP2Q13576 1575 aa19.21■□□□□ 0.67
BMP4-204ENST00000558961 RAPGEF2Q9Y4G8 1499 aa19.21■□□□□ 0.67
BMP4-204ENST00000558961 CTTNBP2Q8WZ74 1663 aa19.15■□□□□ 0.66
BMP4-204ENST00000558961 PRXQ9BXM0 1461 aa19.14■□□□□ 0.65
BMP4-204ENST00000558961 UGGT2Q9NYU1 1516 aa19.11■□□□□ 0.65
BMP4-204ENST00000558961 ADCY10Q96PN6 1610 aa19.11■□□□□ 0.65
BMP4-204ENST00000558961 DISP1Q96F81 1524 aa19.08■□□□□ 0.64
BMP4-204ENST00000558961 CARMIL2Q6F5E8 1435 aa19.07■□□□□ 0.64
BMP4-204ENST00000558961 TRHP20396 242 aaPredicted RBP19.05■□□□□ 0.64
BMP4-204ENST00000558961 EEA1Q15075 1411 aa19.05■□□□□ 0.64
BMP4-204ENST00000558961 KIAA0556O60303 1618 aa19.04■□□□□ 0.64
BMP4-204ENST00000558961 MAPKBP1O60336 1514 aa19.04■□□□□ 0.64
BMP4-204ENST00000558961 TNIKQ9UKE5 1360 aa19.03■□□□□ 0.64
BMP4-204ENST00000558961 KIF13AQ9H1H9 1805 aa19.02■□□□□ 0.64
BMP4-204ENST00000558961 PTPRGP23470 1445 aa19■□□□□ 0.63
BMP4-204ENST00000558961 UHRF1BP1LA0JNW5 1464 aa18.97■□□□□ 0.63
BMP4-204ENST00000558961 CSRNP3Q8WYN3 585 aa18.94■□□□□ 0.62
BMP4-204ENST00000558961 ABCC2Q92887 1545 aa18.94■□□□□ 0.62
BMP4-204ENST00000558961 DIP2BQ9P265 1576 aa18.93■□□□□ 0.62
BMP4-204ENST00000558961 GOLGA3Q08378 1498 aa18.93■□□□□ 0.62
BMP4-204ENST00000558961 ABCC10Q5T3U5 1492 aa18.92■□□□□ 0.62
BMP4-204ENST00000558961 KIF21BO75037 1637 aa18.92■□□□□ 0.62
BMP4-204ENST00000558961 UACAQ9BZF9 1416 aa18.91■□□□□ 0.62
BMP4-204ENST00000558961 CHIC1Q5VXU3 224 aa18.88■□□□□ 0.61
BMP4-204ENST00000558961 SAMD9Q5K651 1589 aa18.88■□□□□ 0.61
BMP4-204ENST00000558961 NPM1P06748 294 aaKnown RBP eCLIP18.87■□□□□ 0.61
BMP4-204ENST00000558961 KDM5BQ9UGL1 1544 aa18.87■□□□□ 0.61
BMP4-204ENST00000558961 ABCA8O94911 1581 aa18.85■□□□□ 0.61
BMP4-204ENST00000558961 ZCCHC11Q5TAX3 1644 aaKnown RBP18.84■□□□□ 0.61
BMP4-204ENST00000558961 PLB1Q6P1J6 1458 aa18.8■□□□□ 0.6
BMP4-204ENST00000558961 ASXL2Q76L83 1435 aa18.8■□□□□ 0.6
BMP4-204ENST00000558961 TTBK1Q5TCY1 1321 aaPredicted RBP18.79■□□□□ 0.6
BMP4-204ENST00000558961 GLI2P10070 1586 aa18.79■□□□□ 0.6
BMP4-204ENST00000558961 FAM69CQ0P6D2 419 aa18.75■□□□□ 0.59
BMP4-204ENST00000558961 FAM9AQ8IZU1 332 aaPredicted RBP18.73■□□□□ 0.59
BMP4-204ENST00000558961 EFCAB5A4FU69 1503 aa18.73■□□□□ 0.59
BMP4-204ENST00000558961 PPRC1Q5VV67 1664 aaKnown RBP18.73■□□□□ 0.59
BMP4-204ENST00000558961 MAP3K4Q9Y6R4 1608 aa18.72■□□□□ 0.59
BMP4-204ENST00000558961 TSPOAP1O95153 1857 aa18.71■□□□□ 0.59
BMP4-204ENST00000558961 EPRSP07814 1512 aaKnown RBP18.71■□□□□ 0.59
BMP4-204ENST00000558961 WDR7Q9Y4E6 1490 aa18.71■□□□□ 0.59
BMP4-204ENST00000558961 RAPGEF6Q8TEU7 1601 aa18.7■□□□□ 0.58
BMP4-204ENST00000558961 KDM6BO15054 1643 aa18.64■□□□□ 0.57
BMP4-204ENST00000558961 CFAP43Q8NDM7 1665 aa18.63■□□□□ 0.57
BMP4-204ENST00000558961 FHOD3Q2V2M9 1422 aa18.63■□□□□ 0.57
BMP4-204ENST00000558961 P3H3Q8IVL6 736 aa18.62■□□□□ 0.57
BMP4-204ENST00000558961 ATP10BO94823 1461 aa18.62■□□□□ 0.57
BMP4-204ENST00000558961 NUP153P49790 1475 aaKnown RBP18.6■□□□□ 0.57
BMP4-204ENST00000558961 TEX14Q8IWB6 1497 aa18.57■□□□□ 0.56
BMP4-204ENST00000558961 ARHGAP35Q9NRY4 1499 aa18.56■□□□□ 0.56
BMP4-204ENST00000558961 MAGI3Q5TCQ9 1506 aa18.54■□□□□ 0.56
BMP4-204ENST00000558961 ABCA9Q8IUA7 1624 aa18.54■□□□□ 0.56
BMP4-204ENST00000558961 UBTFP17480 764 aaKnown RBP18.53■□□□□ 0.56
BMP4-204ENST00000558961 RANGAP1P46060 587 aaPredicted RBP18.5■□□□□ 0.55
BMP4-204ENST00000558961 FMN1Q68DA7 1419 aa18.49■□□□□ 0.55
BMP4-204ENST00000558961 HECW1Q76N89 1606 aa18.49■□□□□ 0.55
BMP4-204ENST00000558961 CD109Q6YHK3 1445 aa18.49■□□□□ 0.55
BMP4-204ENST00000558961 COL17A1Q9UMD9 1497 aaPredicted RBP18.47■□□□□ 0.55
BMP4-204ENST00000558961 ARID3CA6NKF2 412 aa18.45■□□□□ 0.54
BMP4-204ENST00000558961 EHMT2Q96KQ7 1210 aa18.44■□□□□ 0.54
BMP4-204ENST00000558961 CDK13Q14004 1512 aaKnown RBP18.44■□□□□ 0.54
BMP4-204ENST00000558961 LRRIQ1Q96JM4 1722 aa18.43■□□□□ 0.54
BMP4-204ENST00000558961 KCNH8Q96L42 1107 aa18.43■□□□□ 0.54
BMP4-204ENST00000558961 ARAP3Q8WWN8 1544 aa18.39■□□□□ 0.54
BMP4-204ENST00000558961 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.39■□□□□ 0.53
BMP4-204ENST00000558961 PCF11O94913 1555 aaKnown RBP18.38■□□□□ 0.53
BMP4-204ENST00000558961 TTC37Q6PGP7 1564 aa18.38■□□□□ 0.53
BMP4-204ENST00000558961 NEO1Q92859 1461 aa18.37■□□□□ 0.53
BMP4-204ENST00000558961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.36■□□□□ 0.53
BMP4-204ENST00000558961 HNRNPUL2Q1KMD3 747 aaKnown RBP18.36■□□□□ 0.53
BMP4-204ENST00000558961 PHLDB1Q86UU1 1377 aa18.36■□□□□ 0.53
BMP4-204ENST00000558961 CFAP74Q9C0B2 1584 aa18.35■□□□□ 0.53
BMP4-204ENST00000558961 PLEKHD1A6NEE1 506 aa18.35■□□□□ 0.53
BMP4-204ENST00000558961 CASKIN1Q8WXD9 1431 aa18.34■□□□□ 0.53
BMP4-204ENST00000558961 CLIP1P30622 1438 aa18.33■□□□□ 0.53
BMP4-204ENST00000558961 CCDC18Q5T9S5 1454 aa18.32■□□□□ 0.52
BMP4-204ENST00000558961 FYCO1Q9BQS8 1478 aa18.32■□□□□ 0.52
BMP4-204ENST00000558961 FRMPD1Q5SYB0 1578 aa18.3■□□□□ 0.52
BMP4-204ENST00000558961 KIF14Q15058 1648 aa18.3■□□□□ 0.52
BMP4-204ENST00000558961 MYO5CQ9NQX4 1742 aa18.29■□□□□ 0.52
BMP4-204ENST00000558961 TROQ12816 1431 aaPredicted RBP18.28■□□□□ 0.52
BMP4-204ENST00000558961 RICTORQ6R327 1708 aa18.28■□□□□ 0.52
BMP4-204ENST00000558961 FANCAO15360 1455 aa18.26■□□□□ 0.51
BMP4-204ENST00000558961 CDK11AQ9UQ88 783 aaPredicted RBP18.24■□□□□ 0.51
BMP4-204ENST00000558961 PLCH2O75038 1416 aa18.23■□□□□ 0.51
BMP4-204ENST00000558961 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
BMP4-204ENST00000558961 CEP162Q5TB80 1403 aa18.22■□□□□ 0.51
BMP4-204ENST00000558961 AKNAQ7Z591 1439 aa18.22■□□□□ 0.51
BMP4-204ENST00000558961 ADGRL1O94910 1474 aa18.21■□□□□ 0.51
BMP4-204ENST00000558961 KDM4FA0A1W2PPD8 638 aa18.21■□□□□ 0.51
BMP4-204ENST00000558961 ATP1B4Q9UN42 357 aaPredicted RBP18.21■□□□□ 0.51
BMP4-204ENST00000558961 ZMYM4Q5VZL5 1548 aa18.21■□□□□ 0.51
BMP4-204ENST00000558961 PREX2Q70Z35 1606 aa18.2■□□□□ 0.5
BMP4-204ENST00000558961 DENND4BO75064 1496 aaPredicted RBP18.19■□□□□ 0.5
BMP4-204ENST00000558961 ARHGEF40Q8TER5 1519 aa18.18■□□□□ 0.5
BMP4-204ENST00000558961 CDC42BPBQ9Y5S2 1711 aa18.18■□□□□ 0.5
BMP4-204ENST00000558961 CDC42BPAQ5VT25 1732 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms