RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 PRG4Q92954 1404 aaPredicted RBP26.16■■□□□ 1.78
SMAD6-203ENST00000558937 JPH4Q96JJ6 628 aa26.13■■□□□ 1.77
SMAD6-203ENST00000558937 KIAA0586Q9BVV6 1533 aa26.08■■□□□ 1.77
SMAD6-203ENST00000558937 CARMIL1Q5VZK9 1371 aa26.07■■□□□ 1.76
SMAD6-203ENST00000558937 IQGAP2Q13576 1575 aa25.9■■□□□ 1.74
SMAD6-203ENST00000558937 RAPGEF2Q9Y4G8 1499 aa25.87■■□□□ 1.73
SMAD6-203ENST00000558937 ADCY10Q96PN6 1610 aa25.87■■□□□ 1.73
SMAD6-203ENST00000558937 KIF13AQ9H1H9 1805 aa25.82■■□□□ 1.72
SMAD6-203ENST00000558937 CARMIL2Q6F5E8 1435 aa25.8■■□□□ 1.72
SMAD6-203ENST00000558937 MAPKBP1O60336 1514 aa25.78■■□□□ 1.72
SMAD6-203ENST00000558937 PTPRGP23470 1445 aa25.77■■□□□ 1.72
SMAD6-203ENST00000558937 TNIKQ9UKE5 1360 aa25.76■■□□□ 1.71
SMAD6-203ENST00000558937 NPM1P06748 294 aaKnown RBP eCLIP25.75■■□□□ 1.71
SMAD6-203ENST00000558937 DISP1Q96F81 1524 aa25.74■■□□□ 1.71
SMAD6-203ENST00000558937 UGGT2Q9NYU1 1516 aa25.73■■□□□ 1.71
SMAD6-203ENST00000558937 CTTNBP2Q8WZ74 1663 aa25.71■■□□□ 1.71
SMAD6-203ENST00000558937 TTBK1Q5TCY1 1321 aaPredicted RBP25.71■■□□□ 1.71
SMAD6-203ENST00000558937 ABCC10Q5T3U5 1492 aa25.71■■□□□ 1.71
SMAD6-203ENST00000558937 DIP2BQ9P265 1576 aa25.69■■□□□ 1.7
SMAD6-203ENST00000558937 PRXQ9BXM0 1461 aa25.68■■□□□ 1.7
SMAD6-203ENST00000558937 KIAA0556O60303 1618 aa25.67■■□□□ 1.7
SMAD6-203ENST00000558937 ABCC2Q92887 1545 aa25.63■■□□□ 1.69
SMAD6-203ENST00000558937 FAM69CQ0P6D2 419 aa25.63■■□□□ 1.69
SMAD6-203ENST00000558937 UHRF1BP1LA0JNW5 1464 aa25.62■■□□□ 1.69
SMAD6-203ENST00000558937 UACAQ9BZF9 1416 aa25.6■■□□□ 1.69
SMAD6-203ENST00000558937 GOLGA3Q08378 1498 aa25.53■■□□□ 1.68
SMAD6-203ENST00000558937 ASXL2Q76L83 1435 aa25.51■■□□□ 1.67
SMAD6-203ENST00000558937 KDM5BQ9UGL1 1544 aa25.5■■□□□ 1.67
SMAD6-203ENST00000558937 TSPOAP1O95153 1857 aa25.49■■□□□ 1.67
SMAD6-203ENST00000558937 PLB1Q6P1J6 1458 aa25.49■■□□□ 1.67
SMAD6-203ENST00000558937 CSRNP3Q8WYN3 585 aa25.49■■□□□ 1.67
SMAD6-203ENST00000558937 ZCCHC11Q5TAX3 1644 aaKnown RBP25.48■■□□□ 1.67
SMAD6-203ENST00000558937 EEA1Q15075 1411 aa25.47■■□□□ 1.67
SMAD6-203ENST00000558937 GLI2P10070 1586 aa25.44■■□□□ 1.66
SMAD6-203ENST00000558937 ABCA8O94911 1581 aa25.41■■□□□ 1.66
SMAD6-203ENST00000558937 KDM6BO15054 1643 aa25.39■■□□□ 1.66
SMAD6-203ENST00000558937 PPRC1Q5VV67 1664 aaKnown RBP25.38■■□□□ 1.65
SMAD6-203ENST00000558937 EPRSP07814 1512 aaKnown RBP25.37■■□□□ 1.65
SMAD6-203ENST00000558937 SAMD9Q5K651 1589 aa25.35■■□□□ 1.65
SMAD6-203ENST00000558937 FAM9AQ8IZU1 332 aaPredicted RBP25.32■■□□□ 1.64
SMAD6-203ENST00000558937 MAP3K4Q9Y6R4 1608 aa25.32■■□□□ 1.64
SMAD6-203ENST00000558937 WDR7Q9Y4E6 1490 aa25.32■■□□□ 1.64
SMAD6-203ENST00000558937 KIF21BO75037 1637 aa25.3■■□□□ 1.64
SMAD6-203ENST00000558937 P3H3Q8IVL6 736 aa25.29■■□□□ 1.64
SMAD6-203ENST00000558937 CHIC1Q5VXU3 224 aa25.25■■□□□ 1.63
SMAD6-203ENST00000558937 AEBP2Q6ZN18 517 aaPredicted RBP25.25■■□□□ 1.63
SMAD6-203ENST00000558937 TEX14Q8IWB6 1497 aa25.2■■□□□ 1.62
SMAD6-203ENST00000558937 RAPGEF6Q8TEU7 1601 aa25.19■■□□□ 1.62
SMAD6-203ENST00000558937 CFAP43Q8NDM7 1665 aa25.17■■□□□ 1.62
SMAD6-203ENST00000558937 ATP10BO94823 1461 aa25.16■■□□□ 1.62
SMAD6-203ENST00000558937 ARID3CA6NKF2 412 aa25.16■■□□□ 1.62
SMAD6-203ENST00000558937 RANGAP1P46060 587 aaPredicted RBP25.16■■□□□ 1.62
SMAD6-203ENST00000558937 FHOD3Q2V2M9 1422 aa25.16■■□□□ 1.62
SMAD6-203ENST00000558937 KCNH8Q96L42 1107 aa25.13■■□□□ 1.61
SMAD6-203ENST00000558937 COL17A1Q9UMD9 1497 aaPredicted RBP25.13■■□□□ 1.61
SMAD6-203ENST00000558937 EFCAB5A4FU69 1503 aa25.12■■□□□ 1.61
SMAD6-203ENST00000558937 CD109Q6YHK3 1445 aa25.11■■□□□ 1.61
SMAD6-203ENST00000558937 MAGI3Q5TCQ9 1506 aa25.1■■□□□ 1.61
SMAD6-203ENST00000558937 NUP153P49790 1475 aaKnown RBP25.09■■□□□ 1.61
SMAD6-203ENST00000558937 EHMT2Q96KQ7 1210 aa25.04■■□□□ 1.6
SMAD6-203ENST00000558937 ABCA9Q8IUA7 1624 aa25.02■■□□□ 1.6
SMAD6-203ENST00000558937 UBTFP17480 764 aaKnown RBP25■■□□□ 1.59
SMAD6-203ENST00000558937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.98■■□□□ 1.59
SMAD6-203ENST00000558937 HNRNPUL2Q1KMD3 747 aaKnown RBP24.98■■□□□ 1.59
SMAD6-203ENST00000558937 KDM4FA0A1W2PPD8 638 aa24.97■■□□□ 1.59
SMAD6-203ENST00000558937 ARHGAP35Q9NRY4 1499 aa24.93■■□□□ 1.58
SMAD6-203ENST00000558937 ARAP3Q8WWN8 1544 aa24.89■■□□□ 1.57
SMAD6-203ENST00000558937 ADGRL1O94910 1474 aa24.89■■□□□ 1.57
SMAD6-203ENST00000558937 CDK13Q14004 1512 aaKnown RBP24.88■■□□□ 1.57
SMAD6-203ENST00000558937 FMN1Q68DA7 1419 aa24.86■■□□□ 1.57
SMAD6-203ENST00000558937 PLEKHD1A6NEE1 506 aa24.85■■□□□ 1.57
SMAD6-203ENST00000558937 HECW1Q76N89 1606 aa24.85■■□□□ 1.57
SMAD6-203ENST00000558937 NEO1Q92859 1461 aa24.84■■□□□ 1.57
SMAD6-203ENST00000558937 PHLDB1Q86UU1 1377 aa24.83■■□□□ 1.57
SMAD6-203ENST00000558937 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.81■■□□□ 1.56
SMAD6-203ENST00000558937 TTC37Q6PGP7 1564 aa24.8■■□□□ 1.56
SMAD6-203ENST00000558937 FRMPD1Q5SYB0 1578 aa24.76■■□□□ 1.55
SMAD6-203ENST00000558937 ATP1B4Q9UN42 357 aaPredicted RBP24.75■■□□□ 1.55
SMAD6-203ENST00000558937 CFAP74Q9C0B2 1584 aa24.74■■□□□ 1.55
SMAD6-203ENST00000558937 LRRIQ1Q96JM4 1722 aa24.72■■□□□ 1.55
SMAD6-203ENST00000558937 FANCAO15360 1455 aa24.71■■□□□ 1.55
SMAD6-203ENST00000558937 RAPGEF3O95398 923 aa24.71■■□□□ 1.55
SMAD6-203ENST00000558937 PCF11O94913 1555 aaKnown RBP24.69■■□□□ 1.54
SMAD6-203ENST00000558937 AKNAQ7Z591 1439 aa24.69■■□□□ 1.54
SMAD6-203ENST00000558937 RICTORQ6R327 1708 aa24.67■■□□□ 1.54
SMAD6-203ENST00000558937 DENND4BO75064 1496 aaPredicted RBP24.66■■□□□ 1.54
SMAD6-203ENST00000558937 KIF14Q15058 1648 aa24.66■■□□□ 1.54
SMAD6-203ENST00000558937 TROQ12816 1431 aaPredicted RBP24.64■■□□□ 1.54
SMAD6-203ENST00000558937 CDK11AQ9UQ88 783 aaPredicted RBP24.64■■□□□ 1.54
SMAD6-203ENST00000558937 MYO5CQ9NQX4 1742 aa24.64■■□□□ 1.53
SMAD6-203ENST00000558937 CASKIN1Q8WXD9 1431 aa24.63■■□□□ 1.53
SMAD6-203ENST00000558937 PLCH2O75038 1416 aa24.62■■□□□ 1.53
SMAD6-203ENST00000558937 CLIP1P30622 1438 aa24.61■■□□□ 1.53
SMAD6-203ENST00000558937 ARHGEF40Q8TER5 1519 aa24.61■■□□□ 1.53
SMAD6-203ENST00000558937 CCDC18Q5T9S5 1454 aa24.59■■□□□ 1.53
SMAD6-203ENST00000558937 ZMYM4Q5VZL5 1548 aa24.58■■□□□ 1.53
SMAD6-203ENST00000558937 FYCO1Q9BQS8 1478 aa24.57■■□□□ 1.52
SMAD6-203ENST00000558937 ADAMTSL3P82987 1691 aa24.55■■□□□ 1.52
SMAD6-203ENST00000558937 SCAPERQ9BY12 1400 aa24.53■■□□□ 1.52
SMAD6-203ENST00000558937 POGZQ7Z3K3 1410 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms