RNA–Protein interactions for RNA: ENST00000558862.2

FAM227B-206, Transcript of family with sequence similarity 227 member B, humanhuman

TSL 2

Gene FAM227B, Length 670 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM227B-206ENST00000558862 POLA1P09884 1462 aaPredicted RBP17.45■□□□□ 0.38
FAM227B-206ENST00000558862 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
FAM227B-206ENST00000558862 PRDM2Q13029 1718 aa17.43■□□□□ 0.38
FAM227B-206ENST00000558862 SPATA31D1Q6ZQQ2 1576 aa17.42■□□□□ 0.38
FAM227B-206ENST00000558862 NPM1P06748 294 aaKnown RBP eCLIP17.41■□□□□ 0.38
FAM227B-206ENST00000558862 GRIN2BQ13224 1484 aa17.39■□□□□ 0.37
FAM227B-206ENST00000558862 SOGA1O94964 1423 aa17.38■□□□□ 0.37
FAM227B-206ENST00000558862 MAPKBP1O60336 1514 aa17.37■□□□□ 0.37
FAM227B-206ENST00000558862 PPP4R3CPQ6ZMV5 832 aa17.36■□□□□ 0.37
FAM227B-206ENST00000558862 CEP170Q5SW79 1584 aa17.36■□□□□ 0.37
FAM227B-206ENST00000558862 WDR97A6NE52 1622 aa17.35■□□□□ 0.37
FAM227B-206ENST00000558862 TSPOAP1O95153 1857 aa17.35■□□□□ 0.37
FAM227B-206ENST00000558862 CERKQ8TCT0 537 aa17.31■□□□□ 0.36
FAM227B-206ENST00000558862 TOP2BQ02880 1626 aa17.26■□□□□ 0.35
FAM227B-206ENST00000558862 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.34
FAM227B-206ENST00000558862 SHROOM2Q13796 1616 aa17.18■□□□□ 0.34
FAM227B-206ENST00000558862 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
FAM227B-206ENST00000558862 COL17A1Q9UMD9 1497 aaPredicted RBP17.17■□□□□ 0.34
FAM227B-206ENST00000558862 NUP160Q12769 1436 aa17.16■□□□□ 0.34
FAM227B-206ENST00000558862 PRG4Q92954 1404 aaPredicted RBP17.15■□□□□ 0.34
FAM227B-206ENST00000558862 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
FAM227B-206ENST00000558862 GRIN2AQ12879 1464 aa17.15■□□□□ 0.34
FAM227B-206ENST00000558862 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
FAM227B-206ENST00000558862 PBRM1Q86U86 1689 aa17.08■□□□□ 0.32
FAM227B-206ENST00000558862 ADCY10Q96PN6 1610 aa17.08■□□□□ 0.32
FAM227B-206ENST00000558862 CCDC88BA6NC98 1476 aa17.06■□□□□ 0.32
FAM227B-206ENST00000558862 PCF11O94913 1555 aaKnown RBP17.06■□□□□ 0.32
FAM227B-206ENST00000558862 PPRC1Q5VV67 1664 aaKnown RBP17.05■□□□□ 0.32
FAM227B-206ENST00000558862 DCAF8L1A6NGE4 600 aa17.05■□□□□ 0.32
FAM227B-206ENST00000558862 JPH4Q96JJ6 628 aa17.03■□□□□ 0.32
FAM227B-206ENST00000558862 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
FAM227B-206ENST00000558862 PTPRMP28827 1452 aa17.01■□□□□ 0.31
FAM227B-206ENST00000558862 CACNB1Q02641 598 aaPredicted RBP17■□□□□ 0.31
FAM227B-206ENST00000558862 GLI2P10070 1586 aa16.97■□□□□ 0.31
FAM227B-206ENST00000558862 HSPA2P54652 639 aa16.96■□□□□ 0.31
FAM227B-206ENST00000558862 TEX14Q8IWB6 1497 aa16.93■□□□□ 0.3
FAM227B-206ENST00000558862 ABCA5Q8WWZ7 1642 aa16.9■□□□□ 0.3
FAM227B-206ENST00000558862 ADAMTS12P58397 1594 aa16.89■□□□□ 0.3
FAM227B-206ENST00000558862 PLB1Q6P1J6 1458 aa16.89■□□□□ 0.29
FAM227B-206ENST00000558862 ASXL2Q76L83 1435 aa16.88■□□□□ 0.29
FAM227B-206ENST00000558862 FHAD1B1AJZ9 1412 aa16.85■□□□□ 0.29
FAM227B-206ENST00000558862 KIF21BO75037 1637 aa16.85■□□□□ 0.29
FAM227B-206ENST00000558862 CUX1P39880 1505 aa16.84■□□□□ 0.29
FAM227B-206ENST00000558862 ABCA10Q8WWZ4 1543 aa16.84■□□□□ 0.29
FAM227B-206ENST00000558862 NCBP3Q53F19 620 aaKnown RBP16.81■□□□□ 0.28
FAM227B-206ENST00000558862 RNF39Q9H2S5 420 aa16.81■□□□□ 0.28
FAM227B-206ENST00000558862 ADAMTSL3P82987 1691 aa16.81■□□□□ 0.28
FAM227B-206ENST00000558862 MAP3K4Q9Y6R4 1608 aa16.78■□□□□ 0.28
FAM227B-206ENST00000558862 ABCC2Q92887 1545 aa16.77■□□□□ 0.28
FAM227B-206ENST00000558862 EPRSP07814 1512 aaKnown RBP16.75■□□□□ 0.27
FAM227B-206ENST00000558862 KIAA0586Q9BVV6 1533 aa16.73■□□□□ 0.27
FAM227B-206ENST00000558862 RUSC2Q8N2Y8 1516 aa16.69■□□□□ 0.26
FAM227B-206ENST00000558862 PTPRGP23470 1445 aa16.69■□□□□ 0.26
FAM227B-206ENST00000558862 TTBK1Q5TCY1 1321 aaPredicted RBP16.68■□□□□ 0.26
FAM227B-206ENST00000558862 MADDQ8WXG6 1647 aa16.67■□□□□ 0.26
FAM227B-206ENST00000558862 C1QBPQ07021 282 aaKnown RBP16.66■□□□□ 0.26
FAM227B-206ENST00000558862 ARID4BQ4LE39 1312 aaPredicted RBP16.63■□□□□ 0.25
FAM227B-206ENST00000558862 MED1Q15648 1581 aaPredicted RBP16.63■□□□□ 0.25
FAM227B-206ENST00000558862 YEATS2Q9ULM3 1422 aa16.6■□□□□ 0.25
FAM227B-206ENST00000558862 IQSEC2Q5JU85 1478 aa16.6■□□□□ 0.25
FAM227B-206ENST00000558862 BCORL1Q5H9F3 1711 aa16.59■□□□□ 0.25
FAM227B-206ENST00000558862 CUL7Q14999 1698 aa16.59■□□□□ 0.25
FAM227B-206ENST00000558862 ERICH3Q5RHP9 1530 aa16.58■□□□□ 0.24
FAM227B-206ENST00000558862 MAGI3Q5TCQ9 1506 aa16.57■□□□□ 0.24
FAM227B-206ENST00000558862 CD109Q6YHK3 1445 aa16.55■□□□□ 0.24
FAM227B-206ENST00000558862 RIMS1Q86UR5 1692 aaKnown RBP16.55■□□□□ 0.24
FAM227B-206ENST00000558862 UHRF1BP1LA0JNW5 1464 aa16.54■□□□□ 0.24
FAM227B-206ENST00000558862 UBAP1LF5GYI3 381 aa16.53■□□□□ 0.24
FAM227B-206ENST00000558862 TNIKQ9UKE5 1360 aa16.51■□□□□ 0.23
FAM227B-206ENST00000558862 WRNQ14191 1432 aaPredicted RBP eCLIP16.51■□□□□ 0.23
FAM227B-206ENST00000558862 LTBP4Q8N2S1 1624 aa16.5■□□□□ 0.23
FAM227B-206ENST00000558862 UACAQ9BZF9 1416 aa16.49■□□□□ 0.23
FAM227B-206ENST00000558862 KDM5BQ9UGL1 1544 aa16.49■□□□□ 0.23
FAM227B-206ENST00000558862 ARAP3Q8WWN8 1544 aa16.48■□□□□ 0.23
FAM227B-206ENST00000558862 PTPRTO14522 1441 aa16.45■□□□□ 0.22
FAM227B-206ENST00000558862 WDR7Q9Y4E6 1490 aa16.45■□□□□ 0.22
FAM227B-206ENST00000558862 STRCQ7RTU9 1775 aa16.43■□□□□ 0.22
FAM227B-206ENST00000558862 HSPA1LP34931 641 aa16.43■□□□□ 0.22
FAM227B-206ENST00000558862 CARMIL2Q6F5E8 1435 aa16.42■□□□□ 0.22
FAM227B-206ENST00000558862 CFAP43Q8NDM7 1665 aa16.4■□□□□ 0.22
FAM227B-206ENST00000558862 RAPGEF3O95398 923 aa16.4■□□□□ 0.22
FAM227B-206ENST00000558862 ZCCHC11Q5TAX3 1644 aaKnown RBP16.39■□□□□ 0.21
FAM227B-206ENST00000558862 KCNH8Q96L42 1107 aa16.39■□□□□ 0.21
FAM227B-206ENST00000558862 NPM3O75607 178 aaKnown RBP16.38■□□□□ 0.21
FAM227B-206ENST00000558862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.21
FAM227B-206ENST00000558862 POGZQ7Z3K3 1410 aa16.33■□□□□ 0.2
FAM227B-206ENST00000558862 PREX1Q8TCU6 1659 aa16.33■□□□□ 0.2
FAM227B-206ENST00000558862 PHLDB1Q86UU1 1377 aa16.31■□□□□ 0.2
FAM227B-206ENST00000558862 UHRF1BP1Q6BDS2 1440 aa16.28■□□□□ 0.2
FAM227B-206ENST00000558862 PIP4K2BP78356 416 aa16.27■□□□□ 0.2
FAM227B-206ENST00000558862 TTC37Q6PGP7 1564 aa16.26■□□□□ 0.19
FAM227B-206ENST00000558862 MLECQ14165 292 aa16.25■□□□□ 0.19
FAM227B-206ENST00000558862 FANCAO15360 1455 aa16.24■□□□□ 0.19
FAM227B-206ENST00000558862 CEBPAP49715 358 aaPredicted RBP16.24■□□□□ 0.19
FAM227B-206ENST00000558862 RGS17Q9UGC6 210 aaPredicted RBP16.24■□□□□ 0.19
FAM227B-206ENST00000558862 ZNF335Q9H4Z2 1342 aaPredicted RBP16.22■□□□□ 0.19
FAM227B-206ENST00000558862 ARHGEF40Q8TER5 1519 aa16.22■□□□□ 0.19
FAM227B-206ENST00000558862 FRMPD1Q5SYB0 1578 aa16.2■□□□□ 0.18
FAM227B-206ENST00000558862 TOM1O60784 492 aa16.17■□□□□ 0.18
FAM227B-206ENST00000558862 FER1L4A9Z1Z3 1794 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms