RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 PRG4Q92954 1404 aaPredicted RBP18.68■□□□□ 0.58
PBX1-213ENST00000558796 KIAA0586Q9BVV6 1533 aa18.68■□□□□ 0.58
PBX1-213ENST00000558796 CTTNBP2Q8WZ74 1663 aa18.66■□□□□ 0.58
PBX1-213ENST00000558796 RAPGEF2Q9Y4G8 1499 aa18.66■□□□□ 0.58
PBX1-213ENST00000558796 IQGAP2Q13576 1575 aa18.65■□□□□ 0.58
PBX1-213ENST00000558796 JPH4Q96JJ6 628 aa18.63■□□□□ 0.57
PBX1-213ENST00000558796 PRXQ9BXM0 1461 aa18.56■□□□□ 0.56
PBX1-213ENST00000558796 CHIC1Q5VXU3 224 aa18.51■□□□□ 0.55
PBX1-213ENST00000558796 EEA1Q15075 1411 aa18.5■□□□□ 0.55
PBX1-213ENST00000558796 ADCY10Q96PN6 1610 aa18.5■□□□□ 0.55
PBX1-213ENST00000558796 UGGT2Q9NYU1 1516 aa18.49■□□□□ 0.55
PBX1-213ENST00000558796 KIAA0556O60303 1618 aa18.49■□□□□ 0.55
PBX1-213ENST00000558796 DISP1Q96F81 1524 aa18.49■□□□□ 0.55
PBX1-213ENST00000558796 CARMIL2Q6F5E8 1435 aa18.48■□□□□ 0.55
PBX1-213ENST00000558796 CSRNP3Q8WYN3 585 aa18.46■□□□□ 0.55
PBX1-213ENST00000558796 TRHP20396 242 aaPredicted RBP18.45■□□□□ 0.54
PBX1-213ENST00000558796 FAM9AQ8IZU1 332 aaPredicted RBP18.45■□□□□ 0.54
PBX1-213ENST00000558796 KIF21BO75037 1637 aa18.43■□□□□ 0.54
PBX1-213ENST00000558796 TTBK1Q5TCY1 1321 aaPredicted RBP18.43■□□□□ 0.54
PBX1-213ENST00000558796 KIF13AQ9H1H9 1805 aa18.42■□□□□ 0.54
PBX1-213ENST00000558796 TNIKQ9UKE5 1360 aa18.42■□□□□ 0.54
PBX1-213ENST00000558796 PTPRGP23470 1445 aa18.4■□□□□ 0.54
PBX1-213ENST00000558796 GOLGA3Q08378 1498 aa18.36■□□□□ 0.53
PBX1-213ENST00000558796 MAPKBP1O60336 1514 aa18.34■□□□□ 0.53
PBX1-213ENST00000558796 SAMD9Q5K651 1589 aa18.33■□□□□ 0.52
PBX1-213ENST00000558796 ABCC2Q92887 1545 aa18.33■□□□□ 0.52
PBX1-213ENST00000558796 UHRF1BP1LA0JNW5 1464 aa18.3■□□□□ 0.52
PBX1-213ENST00000558796 UACAQ9BZF9 1416 aa18.3■□□□□ 0.52
PBX1-213ENST00000558796 ZCCHC11Q5TAX3 1644 aaKnown RBP18.3■□□□□ 0.52
PBX1-213ENST00000558796 DIP2BQ9P265 1576 aa18.3■□□□□ 0.52
PBX1-213ENST00000558796 NPM1P06748 294 aaKnown RBP eCLIP18.29■□□□□ 0.52
PBX1-213ENST00000558796 EHMT2Q96KQ7 1210 aa18.27■□□□□ 0.52
PBX1-213ENST00000558796 PLB1Q6P1J6 1458 aa18.26■□□□□ 0.51
PBX1-213ENST00000558796 ABCA8O94911 1581 aa18.25■□□□□ 0.51
PBX1-213ENST00000558796 TSPOAP1O95153 1857 aa18.25■□□□□ 0.51
PBX1-213ENST00000558796 ABCC10Q5T3U5 1492 aa18.24■□□□□ 0.51
PBX1-213ENST00000558796 RANGAP1P46060 587 aaPredicted RBP18.23■□□□□ 0.51
PBX1-213ENST00000558796 KDM5BQ9UGL1 1544 aa18.23■□□□□ 0.51
PBX1-213ENST00000558796 P3H3Q8IVL6 736 aa18.22■□□□□ 0.51
PBX1-213ENST00000558796 EFCAB5A4FU69 1503 aa18.19■□□□□ 0.5
PBX1-213ENST00000558796 ASXL2Q76L83 1435 aa18.19■□□□□ 0.5
PBX1-213ENST00000558796 RAPGEF6Q8TEU7 1601 aa18.19■□□□□ 0.5
PBX1-213ENST00000558796 FHOD3Q2V2M9 1422 aa18.18■□□□□ 0.5
PBX1-213ENST00000558796 UBTFP17480 764 aaKnown RBP18.16■□□□□ 0.5
PBX1-213ENST00000558796 FAM69CQ0P6D2 419 aa18.16■□□□□ 0.5
PBX1-213ENST00000558796 PPRC1Q5VV67 1664 aaKnown RBP18.12■□□□□ 0.49
PBX1-213ENST00000558796 GLI2P10070 1586 aa18.12■□□□□ 0.49
PBX1-213ENST00000558796 MAP3K4Q9Y6R4 1608 aa18.1■□□□□ 0.49
PBX1-213ENST00000558796 WDR7Q9Y4E6 1490 aa18.1■□□□□ 0.49
PBX1-213ENST00000558796 EPRSP07814 1512 aaKnown RBP18.09■□□□□ 0.49
PBX1-213ENST00000558796 ARID3CA6NKF2 412 aa18.08■□□□□ 0.48
PBX1-213ENST00000558796 ARHGAP35Q9NRY4 1499 aa18.07■□□□□ 0.48
PBX1-213ENST00000558796 NUP153P49790 1475 aaKnown RBP18.06■□□□□ 0.48
PBX1-213ENST00000558796 ATP10BO94823 1461 aa18.05■□□□□ 0.48
PBX1-213ENST00000558796 CFAP43Q8NDM7 1665 aa18.04■□□□□ 0.48
PBX1-213ENST00000558796 KDM6BO15054 1643 aa18.02■□□□□ 0.48
PBX1-213ENST00000558796 HECW1Q76N89 1606 aa18■□□□□ 0.47
PBX1-213ENST00000558796 LRRIQ1Q96JM4 1722 aa18■□□□□ 0.47
PBX1-213ENST00000558796 CDK13Q14004 1512 aaKnown RBP17.97■□□□□ 0.47
PBX1-213ENST00000558796 FMN1Q68DA7 1419 aa17.97■□□□□ 0.47
PBX1-213ENST00000558796 KCNH8Q96L42 1107 aa17.96■□□□□ 0.47
PBX1-213ENST00000558796 ABCA9Q8IUA7 1624 aa17.95■□□□□ 0.46
PBX1-213ENST00000558796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.95■□□□□ 0.46
PBX1-213ENST00000558796 HNRNPUL2Q1KMD3 747 aaKnown RBP17.95■□□□□ 0.46
PBX1-213ENST00000558796 PCF11O94913 1555 aaKnown RBP17.95■□□□□ 0.46
PBX1-213ENST00000558796 TEX14Q8IWB6 1497 aa17.94■□□□□ 0.46
PBX1-213ENST00000558796 CLIP1P30622 1438 aa17.91■□□□□ 0.46
PBX1-213ENST00000558796 CD109Q6YHK3 1445 aa17.9■□□□□ 0.46
PBX1-213ENST00000558796 MAGI3Q5TCQ9 1506 aa17.88■□□□□ 0.45
PBX1-213ENST00000558796 ATP1B4Q9UN42 357 aaPredicted RBP17.88■□□□□ 0.45
PBX1-213ENST00000558796 TTC37Q6PGP7 1564 aa17.87■□□□□ 0.45
PBX1-213ENST00000558796 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.83■□□□□ 0.45
PBX1-213ENST00000558796 COL17A1Q9UMD9 1497 aaPredicted RBP17.83■□□□□ 0.45
PBX1-213ENST00000558796 CEP162Q5TB80 1403 aa17.83■□□□□ 0.45
PBX1-213ENST00000558796 CASKIN1Q8WXD9 1431 aa17.83■□□□□ 0.45
PBX1-213ENST00000558796 KIF14Q15058 1648 aa17.83■□□□□ 0.44
PBX1-213ENST00000558796 FYCO1Q9BQS8 1478 aa17.82■□□□□ 0.44
PBX1-213ENST00000558796 PLEKHD1A6NEE1 506 aa17.82■□□□□ 0.44
PBX1-213ENST00000558796 MYO5CQ9NQX4 1742 aa17.81■□□□□ 0.44
PBX1-213ENST00000558796 CCDC18Q5T9S5 1454 aa17.8■□□□□ 0.44
PBX1-213ENST00000558796 CFAP74Q9C0B2 1584 aa17.78■□□□□ 0.44
PBX1-213ENST00000558796 LOC105371045A0A1W2PR82 267 aa17.77■□□□□ 0.44
PBX1-213ENST00000558796 TROQ12816 1431 aaPredicted RBP17.74■□□□□ 0.43
PBX1-213ENST00000558796 ARAP3Q8WWN8 1544 aa17.74■□□□□ 0.43
PBX1-213ENST00000558796 NEO1Q92859 1461 aa17.74■□□□□ 0.43
PBX1-213ENST00000558796 FRMPD1Q5SYB0 1578 aa17.72■□□□□ 0.43
PBX1-213ENST00000558796 FANCAO15360 1455 aa17.71■□□□□ 0.43
PBX1-213ENST00000558796 CDK11AQ9UQ88 783 aaPredicted RBP17.71■□□□□ 0.43
PBX1-213ENST00000558796 RICTORQ6R327 1708 aa17.71■□□□□ 0.43
PBX1-213ENST00000558796 CDC42BPBQ9Y5S2 1711 aa17.7■□□□□ 0.42
PBX1-213ENST00000558796 CDC42BPAQ5VT25 1732 aa17.69■□□□□ 0.42
PBX1-213ENST00000558796 PREX2Q70Z35 1606 aa17.69■□□□□ 0.42
PBX1-213ENST00000558796 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
PBX1-213ENST00000558796 PLCH2O75038 1416 aa17.65■□□□□ 0.42
PBX1-213ENST00000558796 AKNAQ7Z591 1439 aa17.65■□□□□ 0.42
PBX1-213ENST00000558796 ARHGAP5Q13017 1502 aa17.65■□□□□ 0.42
PBX1-213ENST00000558796 DENND4BO75064 1496 aaPredicted RBP17.62■□□□□ 0.41
PBX1-213ENST00000558796 ADGRL1O94910 1474 aa17.62■□□□□ 0.41
PBX1-213ENST00000558796 RAPGEF3O95398 923 aa17.61■□□□□ 0.41
PBX1-213ENST00000558796 EHBP1L1Q8N3D4 1523 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms