RNA–Protein interactions for RNA: ENST00000558676.5

NTRK3-212, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 1 (best) BASIC

Gene NTRK3, Length 4,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-212ENST00000558676 RUSC2Q8N2Y8 1516 aa11.01□□□□□ -0.65
NTRK3-212ENST00000558676 CCDC136Q96JN2 1154 aa11.01□□□□□ -0.65
NTRK3-212ENST00000558676 NPM2Q86SE8 214 aaKnown RBP11□□□□□ -0.65
NTRK3-212ENST00000558676 RRP7BPQ9NSQ0 103 aa11□□□□□ -0.65
NTRK3-212ENST00000558676 SMARCA4P51532 1647 aa11□□□□□ -0.65
NTRK3-212ENST00000558676 FHAD1B1AJZ9 1412 aa11□□□□□ -0.65
NTRK3-212ENST00000558676 SETD5Q9C0A6 1442 aa10.99□□□□□ -0.65
NTRK3-212ENST00000558676 TMC1Q8TDI8 760 aa10.99□□□□□ -0.65
NTRK3-212ENST00000558676 CCER2I3L3R5 266 aa10.97□□□□□ -0.65
NTRK3-212ENST00000558676 RAPGEF2Q9Y4G8 1499 aa10.97□□□□□ -0.65
NTRK3-212ENST00000558676 SMARCA2P51531 1590 aa10.97□□□□□ -0.65
NTRK3-212ENST00000558676 CARMIL1Q5VZK9 1371 aa10.96□□□□□ -0.66
NTRK3-212ENST00000558676 RAB3GAP2Q9H2M9 1393 aa10.96□□□□□ -0.66
NTRK3-212ENST00000558676 CUX2O14529 1486 aa10.96□□□□□ -0.66
NTRK3-212ENST00000558676 DHX57Q6P158 1386 aaKnown RBP10.95□□□□□ -0.66
NTRK3-212ENST00000558676 ZBTB47Q9UFB7 747 aaPredicted RBP10.95□□□□□ -0.66
NTRK3-212ENST00000558676 NBR1Q14596 966 aa10.93□□□□□ -0.66
NTRK3-212ENST00000558676 GLIPR1L2Q4G1C9 344 aa10.93□□□□□ -0.66
NTRK3-212ENST00000558676 CANXP27824 592 aaKnown RBP10.92□□□□□ -0.66
NTRK3-212ENST00000558676 SALL2Q9Y467 1007 aaPredicted RBP10.92□□□□□ -0.66
NTRK3-212ENST00000558676 PPP4R2Q9NY27 417 aa10.91□□□□□ -0.66
NTRK3-212ENST00000558676 TSHZ2Q9NRE2 1034 aa10.91□□□□□ -0.66
NTRK3-212ENST00000558676 ARHGAP35Q9NRY4 1499 aa10.9□□□□□ -0.66
NTRK3-212ENST00000558676 EIF5BO60841 1220 aaKnown RBP10.9□□□□□ -0.67
NTRK3-212ENST00000558676 RBM19Q9Y4C8 960 aaKnown RBP10.88□□□□□ -0.67
NTRK3-212ENST00000558676 KDM2AQ9Y2K7 1162 aa10.88□□□□□ -0.67
NTRK3-212ENST00000558676 TSPY4P0CV99 314 aa10.87□□□□□ -0.67
NTRK3-212ENST00000558676 TSPY10P0CW01 314 aa10.87□□□□□ -0.67
NTRK3-212ENST00000558676 ATAD2BQ9ULI0 1458 aa10.86□□□□□ -0.67
NTRK3-212ENST00000558676 PPP1R15AO75807 674 aaPredicted RBP10.86□□□□□ -0.67
NTRK3-212ENST00000558676 BICRAQ9NZM4 1560 aa10.85□□□□□ -0.67
NTRK3-212ENST00000558676 HSPA5P11021 654 aaKnown RBP10.82□□□□□ -0.68
NTRK3-212ENST00000558676 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.82□□□□□ -0.68
NTRK3-212ENST00000558676 KIF21BO75037 1637 aa10.81□□□□□ -0.68
NTRK3-212ENST00000558676 B4GALNT3Q6L9W6 998 aa10.81□□□□□ -0.68
NTRK3-212ENST00000558676 ERICH6BQ5W0A0 696 aa10.81□□□□□ -0.68
NTRK3-212ENST00000558676 WDR43Q15061 677 aaKnown RBP eCLIP10.81□□□□□ -0.68
NTRK3-212ENST00000558676 KCNH8Q96L42 1107 aa10.81□□□□□ -0.68
NTRK3-212ENST00000558676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.81□□□□□ -0.68
NTRK3-212ENST00000558676 CFDP1Q9UEE9 299 aaPredicted RBP10.79□□□□□ -0.68
NTRK3-212ENST00000558676 FMN1Q68DA7 1419 aa10.79□□□□□ -0.68
NTRK3-212ENST00000558676 SENP3-EIF4A1A0A087X0R7 540 aa10.78□□□□□ -0.68
NTRK3-212ENST00000558676 CARD11Q9BXL7 1154 aa10.78□□□□□ -0.68
NTRK3-212ENST00000558676 NOP58Q9Y2X3 529 aaKnown RBP10.78□□□□□ -0.68
NTRK3-212ENST00000558676 EIF4G1Q04637 1599 aaKnown RBP10.77□□□□□ -0.68
NTRK3-212ENST00000558676 CHMP7Q8WUX9 453 aaPredicted RBP10.77□□□□□ -0.68
NTRK3-212ENST00000558676 UPF2Q9HAU5 1272 aaKnown RBP10.77□□□□□ -0.69
NTRK3-212ENST00000558676 DDRGK1Q96HY6 314 aa10.76□□□□□ -0.69
NTRK3-212ENST00000558676 PLEKHD1A6NEE1 506 aa10.76□□□□□ -0.69
NTRK3-212ENST00000558676 FHOD3Q2V2M9 1422 aa10.75□□□□□ -0.69
NTRK3-212ENST00000558676 BCL11AQ9H165 835 aa10.75□□□□□ -0.69
NTRK3-212ENST00000558676 NEFMP07197 916 aa10.74□□□□□ -0.69
NTRK3-212ENST00000558676 SYNJ1O43426 1573 aa10.73□□□□□ -0.69
NTRK3-212ENST00000558676 MPHOSPH9Q99550 1183 aa10.73□□□□□ -0.69
NTRK3-212ENST00000558676 RGL3Q3MIN7 710 aa10.72□□□□□ -0.69
NTRK3-212ENST00000558676 NCAPD3P42695 1498 aa10.71□□□□□ -0.69
NTRK3-212ENST00000558676 CADPSQ9ULU8 1353 aa10.71□□□□□ -0.69
NTRK3-212ENST00000558676 UNC13AQ9UPW8 1703 aa10.71□□□□□ -0.7
NTRK3-212ENST00000558676 ERICH3Q5RHP9 1530 aa10.71□□□□□ -0.7
NTRK3-212ENST00000558676 PPM1GO15355 546 aaPredicted RBP10.71□□□□□ -0.7
NTRK3-212ENST00000558676 FOXD1Q16676 465 aa10.71□□□□□ -0.7
NTRK3-212ENST00000558676 RRBP1Q9P2E9 1410 aaKnown RBP10.7□□□□□ -0.7
NTRK3-212ENST00000558676 CHGAP10645 457 aaKnown RBP10.69□□□□□ -0.7
NTRK3-212ENST00000558676 L3MBTL2Q969R5 705 aa10.69□□□□□ -0.7
NTRK3-212ENST00000558676 CCDC18Q5T9S5 1454 aa10.67□□□□□ -0.7
NTRK3-212ENST00000558676 ARAP1Q96P48 1450 aa10.67□□□□□ -0.7
NTRK3-212ENST00000558676 DEKP35659 375 aaKnown RBP10.67□□□□□ -0.7
NTRK3-212ENST00000558676 KNSTRNQ9Y448 316 aa10.67□□□□□ -0.7
NTRK3-212ENST00000558676 IGF1RP08069 1367 aa10.67□□□□□ -0.7
NTRK3-212ENST00000558676 ANP32BQ92688 251 aaKnown RBP10.66□□□□□ -0.7
NTRK3-212ENST00000558676 LAS1LQ9Y4W2 734 aaKnown RBP10.66□□□□□ -0.7
NTRK3-212ENST00000558676 TDRD9Q8NDG6 1382 aaKnown RBP10.66□□□□□ -0.7
NTRK3-212ENST00000558676 CDCA8Q53HL2 280 aa10.66□□□□□ -0.7
NTRK3-212ENST00000558676 DNAJC5BQ9UF47 199 aa10.66□□□□□ -0.7
NTRK3-212ENST00000558676 DCAF11Q8TEB1 546 aa10.66□□□□□ -0.7
NTRK3-212ENST00000558676 PHLDB1Q86UU1 1377 aa10.65□□□□□ -0.7
NTRK3-212ENST00000558676 LRRC9Q6ZRR7 1453 aa10.65□□□□□ -0.7
NTRK3-212ENST00000558676 HSP90AA1P07900 732 aaKnown RBP10.65□□□□□ -0.7
NTRK3-212ENST00000558676 PKD2Q13563 968 aa10.65□□□□□ -0.7
NTRK3-212ENST00000558676 BECN1Q14457 450 aa10.64□□□□□ -0.71
NTRK3-212ENST00000558676 NUDCQ9Y266 331 aa10.64□□□□□ -0.71
NTRK3-212ENST00000558676 PRXQ9BXM0 1461 aa10.63□□□□□ -0.71
NTRK3-212ENST00000558676 CC2D1BQ5T0F9 858 aaKnown RBP10.63□□□□□ -0.71
NTRK3-212ENST00000558676 CC2D2AQ9P2K1 1620 aa10.63□□□□□ -0.71
NTRK3-212ENST00000558676 ERCC6Q03468 1493 aa10.62□□□□□ -0.71
NTRK3-212ENST00000558676 PRKRIP1Q9H875 184 aaPredicted RBP10.62□□□□□ -0.71
NTRK3-212ENST00000558676 TOP2BQ02880 1626 aa10.62□□□□□ -0.71
NTRK3-212ENST00000558676 RALBP1Q15311 655 aa10.61□□□□□ -0.71
NTRK3-212ENST00000558676 FGD5Q6ZNL6 1462 aa10.61□□□□□ -0.71
NTRK3-212ENST00000558676 FGD6Q6ZV73 1430 aa10.61□□□□□ -0.71
NTRK3-212ENST00000558676 TMF1P82094 1093 aa10.6□□□□□ -0.71
NTRK3-212ENST00000558676 FANCIQ9NVI1 1328 aa10.6□□□□□ -0.71
NTRK3-212ENST00000558676 KTN1Q86UP2 1357 aaKnown RBP10.6□□□□□ -0.71
NTRK3-212ENST00000558676 UACAQ9BZF9 1416 aa10.6□□□□□ -0.71
NTRK3-212ENST00000558676 PDS5BQ9NTI5 1447 aa10.6□□□□□ -0.71
NTRK3-212ENST00000558676 ZBED9Q6R2W3 1325 aa10.6□□□□□ -0.71
NTRK3-212ENST00000558676 RCAN3Q9UKA8 241 aa10.6□□□□□ -0.71
NTRK3-212ENST00000558676 TCERG1O14776 1098 aaKnown RBP10.59□□□□□ -0.71
NTRK3-212ENST00000558676 RGS3P49796 1198 aa10.59□□□□□ -0.71
NTRK3-212ENST00000558676 ARXQ96QS3 562 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms