RNA–Protein interactions for RNA: ENST00000558364.1

RMDN3-205, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-205ENST00000558364 ARHGEF11O15085 1522 aa23.71■■□□□ 1.39
RMDN3-205ENST00000558364 RIMBP3CA6NJZ7 1639 aa23.65■■□□□ 1.38
RMDN3-205ENST00000558364 RIMBP3BA6NNM3 1639 aa23.65■■□□□ 1.38
RMDN3-205ENST00000558364 RIMBP3Q9UFD9 1639 aa23.65■■□□□ 1.38
RMDN3-205ENST00000558364 SHROOM2Q13796 1616 aa23.63■■□□□ 1.37
RMDN3-205ENST00000558364 PRG4Q92954 1404 aaPredicted RBP23.61■■□□□ 1.37
RMDN3-205ENST00000558364 KIF21BO75037 1637 aa23.59■■□□□ 1.37
RMDN3-205ENST00000558364 IQGAP2Q13576 1575 aa23.57■■□□□ 1.36
RMDN3-205ENST00000558364 CYB5RLQ6IPT4 315 aa23.57■■□□□ 1.36
RMDN3-205ENST00000558364 ERCC6L2Q5T890 1561 aa23.56■■□□□ 1.36
RMDN3-205ENST00000558364 ARAP1Q96P48 1450 aa23.55■■□□□ 1.36
RMDN3-205ENST00000558364 EHMT2Q96KQ7 1210 aa23.53■■□□□ 1.36
RMDN3-205ENST00000558364 GOLGA3Q08378 1498 aa23.52■■□□□ 1.36
RMDN3-205ENST00000558364 UBTFP17480 764 aaKnown RBP23.52■■□□□ 1.36
RMDN3-205ENST00000558364 UGGT2Q9NYU1 1516 aa23.49■■□□□ 1.35
RMDN3-205ENST00000558364 CARMIL2Q6F5E8 1435 aa23.49■■□□□ 1.35
RMDN3-205ENST00000558364 CTTNBP2Q8WZ74 1663 aa23.48■■□□□ 1.35
RMDN3-205ENST00000558364 DISP1Q96F81 1524 aa23.43■■□□□ 1.34
RMDN3-205ENST00000558364 TNIKQ9UKE5 1360 aa23.41■■□□□ 1.34
RMDN3-205ENST00000558364 PTPRGP23470 1445 aa23.39■■□□□ 1.33
RMDN3-205ENST00000558364 RANGAP1P46060 587 aaPredicted RBP23.36■■□□□ 1.33
RMDN3-205ENST00000558364 TTBK1Q5TCY1 1321 aaPredicted RBP23.34■■□□□ 1.33
RMDN3-205ENST00000558364 KIAA0556O60303 1618 aa23.34■■□□□ 1.33
RMDN3-205ENST00000558364 P3H3Q8IVL6 736 aa23.32■■□□□ 1.32
RMDN3-205ENST00000558364 LOC105371045A0A1W2PR82 267 aa23.29■■□□□ 1.32
RMDN3-205ENST00000558364 SAMD9Q5K651 1589 aa23.26■■□□□ 1.31
RMDN3-205ENST00000558364 UACAQ9BZF9 1416 aa23.22■■□□□ 1.31
RMDN3-205ENST00000558364 EFCAB5A4FU69 1503 aa23.22■■□□□ 1.31
RMDN3-205ENST00000558364 FHOD3Q2V2M9 1422 aa23.19■■□□□ 1.3
RMDN3-205ENST00000558364 NPM1P06748 294 aaKnown RBP eCLIP23.18■■□□□ 1.3
RMDN3-205ENST00000558364 UHRF1BP1LA0JNW5 1464 aa23.17■■□□□ 1.3
RMDN3-205ENST00000558364 ARHGAP35Q9NRY4 1499 aa23.17■■□□□ 1.3
RMDN3-205ENST00000558364 PLB1Q6P1J6 1458 aa23.15■■□□□ 1.3
RMDN3-205ENST00000558364 ADCY10Q96PN6 1610 aa23.15■■□□□ 1.3
RMDN3-205ENST00000558364 CLIP1P30622 1438 aa23.12■■□□□ 1.29
RMDN3-205ENST00000558364 ABCC2Q92887 1545 aa23.12■■□□□ 1.29
RMDN3-205ENST00000558364 ABCA8O94911 1581 aa23.1■■□□□ 1.29
RMDN3-205ENST00000558364 KDM5BQ9UGL1 1544 aa23.06■■□□□ 1.28
RMDN3-205ENST00000558364 CEP162Q5TB80 1403 aa23.06■■□□□ 1.28
RMDN3-205ENST00000558364 FMN1Q68DA7 1419 aa23.06■■□□□ 1.28
RMDN3-205ENST00000558364 RAPGEF6Q8TEU7 1601 aa23■■□□□ 1.27
RMDN3-205ENST00000558364 MAPKBP1O60336 1514 aa22.99■■□□□ 1.27
RMDN3-205ENST00000558364 TRHP20396 242 aaPredicted RBP22.99■■□□□ 1.27
RMDN3-205ENST00000558364 ARID3CA6NKF2 412 aa22.98■■□□□ 1.27
RMDN3-205ENST00000558364 ATP10BO94823 1461 aa22.98■■□□□ 1.27
RMDN3-205ENST00000558364 NUP153P49790 1475 aaKnown RBP22.97■■□□□ 1.27
RMDN3-205ENST00000558364 ASXL2Q76L83 1435 aa22.95■■□□□ 1.26
RMDN3-205ENST00000558364 ATP1B4Q9UN42 357 aaPredicted RBP22.94■■□□□ 1.26
RMDN3-205ENST00000558364 ZCCHC11Q5TAX3 1644 aaKnown RBP22.93■■□□□ 1.26
RMDN3-205ENST00000558364 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.92■■□□□ 1.26
RMDN3-205ENST00000558364 HNRNPUL2Q1KMD3 747 aaKnown RBP22.92■■□□□ 1.26
RMDN3-205ENST00000558364 CASKIN1Q8WXD9 1431 aa22.91■■□□□ 1.26
RMDN3-205ENST00000558364 FAM69CQ0P6D2 419 aa22.89■■□□□ 1.25
RMDN3-205ENST00000558364 ABCC10Q5T3U5 1492 aa22.89■■□□□ 1.25
RMDN3-205ENST00000558364 WDR7Q9Y4E6 1490 aa22.85■■□□□ 1.25
RMDN3-205ENST00000558364 EPRSP07814 1512 aaKnown RBP22.84■■□□□ 1.25
RMDN3-205ENST00000558364 PLEKHD1A6NEE1 506 aa22.84■■□□□ 1.25
RMDN3-205ENST00000558364 HECW1Q76N89 1606 aa22.83■■□□□ 1.25
RMDN3-205ENST00000558364 KCNH8Q96L42 1107 aa22.83■■□□□ 1.25
RMDN3-205ENST00000558364 FYCO1Q9BQS8 1478 aa22.81■■□□□ 1.24
RMDN3-205ENST00000558364 PCF11O94913 1555 aaKnown RBP22.8■■□□□ 1.24
RMDN3-205ENST00000558364 CDK11AQ9UQ88 783 aaPredicted RBP22.8■■□□□ 1.24
RMDN3-205ENST00000558364 CDK13Q14004 1512 aaKnown RBP22.8■■□□□ 1.24
RMDN3-205ENST00000558364 DIP2BQ9P265 1576 aa22.8■■□□□ 1.24
RMDN3-205ENST00000558364 VPS8Q8N3P4 1428 aa22.77■■□□□ 1.24
RMDN3-205ENST00000558364 GLI2P10070 1586 aa22.76■■□□□ 1.23
RMDN3-205ENST00000558364 CCDC18Q5T9S5 1454 aa22.75■■□□□ 1.23
RMDN3-205ENST00000558364 KIF13AQ9H1H9 1805 aa22.75■■□□□ 1.23
RMDN3-205ENST00000558364 LRRIQ1Q96JM4 1722 aa22.68■■□□□ 1.22
RMDN3-205ENST00000558364 TROQ12816 1431 aaPredicted RBP22.67■■□□□ 1.22
RMDN3-205ENST00000558364 CD109Q6YHK3 1445 aa22.65■■□□□ 1.22
RMDN3-205ENST00000558364 MAP3K4Q9Y6R4 1608 aa22.61■■□□□ 1.21
RMDN3-205ENST00000558364 MAGI3Q5TCQ9 1506 aa22.6■■□□□ 1.21
RMDN3-205ENST00000558364 ABCA9Q8IUA7 1624 aa22.6■■□□□ 1.21
RMDN3-205ENST00000558364 MTUS2Q5JR59 1369 aa22.58■■□□□ 1.21
RMDN3-205ENST00000558364 CFAP43Q8NDM7 1665 aa22.58■■□□□ 1.2
RMDN3-205ENST00000558364 APLP2Q06481 763 aa22.57■■□□□ 1.2
RMDN3-205ENST00000558364 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.57■■□□□ 1.2
RMDN3-205ENST00000558364 TSPOAP1O95153 1857 aa22.56■■□□□ 1.2
RMDN3-205ENST00000558364 MAP3K1Q13233 1512 aa22.55■■□□□ 1.2
RMDN3-205ENST00000558364 TEX14Q8IWB6 1497 aa22.54■■□□□ 1.2
RMDN3-205ENST00000558364 PPRC1Q5VV67 1664 aaKnown RBP22.53■■□□□ 1.2
RMDN3-205ENST00000558364 TIAM1Q13009 1591 aa22.53■■□□□ 1.2
RMDN3-205ENST00000558364 KIF14Q15058 1648 aa22.52■■□□□ 1.2
RMDN3-205ENST00000558364 KANK4Q5T7N3 995 aaPredicted RBP22.51■■□□□ 1.19
RMDN3-205ENST00000558364 PLCH2O75038 1416 aa22.5■■□□□ 1.19
RMDN3-205ENST00000558364 TTC37Q6PGP7 1564 aa22.5■■□□□ 1.19
RMDN3-205ENST00000558364 LRRC9Q6ZRR7 1453 aa22.47■■□□□ 1.19
RMDN3-205ENST00000558364 EHBP1L1Q8N3D4 1523 aa22.47■■□□□ 1.19
RMDN3-205ENST00000558364 PHLDB1Q86UU1 1377 aa22.47■■□□□ 1.19
RMDN3-205ENST00000558364 EFCAB2Q5VUJ9 269 aa22.45■■□□□ 1.18
RMDN3-205ENST00000558364 NEO1Q92859 1461 aa22.44■■□□□ 1.18
RMDN3-205ENST00000558364 FANCAO15360 1455 aa22.42■■□□□ 1.18
RMDN3-205ENST00000558364 ARAP3Q8WWN8 1544 aa22.41■■□□□ 1.18
RMDN3-205ENST00000558364 COL17A1Q9UMD9 1497 aaPredicted RBP22.41■■□□□ 1.18
RMDN3-205ENST00000558364 CCNB3Q8WWL7 1395 aa22.41■■□□□ 1.18
RMDN3-205ENST00000558364 GPATCH8Q9UKJ3 1502 aaKnown RBP22.4■■□□□ 1.18
RMDN3-205ENST00000558364 AKNAQ7Z591 1439 aa22.4■■□□□ 1.18
RMDN3-205ENST00000558364 NCOA2Q15596 1464 aa22.39■■□□□ 1.17
RMDN3-205ENST00000558364 CFDP1Q9UEE9 299 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms