RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 JPH4Q96JJ6 628 aa17.47■□□□□ 0.39
TPM1-212ENST00000558347 CARMIL1Q5VZK9 1371 aa17.46■□□□□ 0.39
TPM1-212ENST00000558347 TRHP20396 242 aaPredicted RBP17.45■□□□□ 0.38
TPM1-212ENST00000558347 KIAA0586Q9BVV6 1533 aa17.43■□□□□ 0.38
TPM1-212ENST00000558347 RAPGEF2Q9Y4G8 1499 aa17.33■□□□□ 0.36
TPM1-212ENST00000558347 IQGAP2Q13576 1575 aa17.31■□□□□ 0.36
TPM1-212ENST00000558347 ADCY10Q96PN6 1610 aa17.27■□□□□ 0.35
TPM1-212ENST00000558347 CARMIL2Q6F5E8 1435 aa17.24■□□□□ 0.35
TPM1-212ENST00000558347 DISP1Q96F81 1524 aa17.23■□□□□ 0.35
TPM1-212ENST00000558347 PRXQ9BXM0 1461 aa17.22■□□□□ 0.35
TPM1-212ENST00000558347 PTPRGP23470 1445 aa17.21■□□□□ 0.35
TPM1-212ENST00000558347 TNIKQ9UKE5 1360 aa17.21■□□□□ 0.35
TPM1-212ENST00000558347 UGGT2Q9NYU1 1516 aa17.2■□□□□ 0.34
TPM1-212ENST00000558347 CTTNBP2Q8WZ74 1663 aa17.2■□□□□ 0.34
TPM1-212ENST00000558347 KIF13AQ9H1H9 1805 aa17.2■□□□□ 0.34
TPM1-212ENST00000558347 TTBK1Q5TCY1 1321 aaPredicted RBP17.2■□□□□ 0.34
TPM1-212ENST00000558347 MAPKBP1O60336 1514 aa17.17■□□□□ 0.34
TPM1-212ENST00000558347 NPM1P06748 294 aaKnown RBP eCLIP17.17■□□□□ 0.34
TPM1-212ENST00000558347 KIAA0556O60303 1618 aa17.17■□□□□ 0.34
TPM1-212ENST00000558347 ABCC10Q5T3U5 1492 aa17.13■□□□□ 0.33
TPM1-212ENST00000558347 CSRNP3Q8WYN3 585 aa17.12■□□□□ 0.33
TPM1-212ENST00000558347 DIP2BQ9P265 1576 aa17.12■□□□□ 0.33
TPM1-212ENST00000558347 ABCC2Q92887 1545 aa17.11■□□□□ 0.33
TPM1-212ENST00000558347 CHIC1Q5VXU3 224 aa17.11■□□□□ 0.33
TPM1-212ENST00000558347 UACAQ9BZF9 1416 aa17.1■□□□□ 0.33
TPM1-212ENST00000558347 UHRF1BP1LA0JNW5 1464 aa17.1■□□□□ 0.33
TPM1-212ENST00000558347 EEA1Q15075 1411 aa17.09■□□□□ 0.33
TPM1-212ENST00000558347 FAM69CQ0P6D2 419 aa17.09■□□□□ 0.33
TPM1-212ENST00000558347 GOLGA3Q08378 1498 aa17.06■□□□□ 0.32
TPM1-212ENST00000558347 FAM9AQ8IZU1 332 aaPredicted RBP17.05■□□□□ 0.32
TPM1-212ENST00000558347 KDM5BQ9UGL1 1544 aa17.03■□□□□ 0.32
TPM1-212ENST00000558347 ASXL2Q76L83 1435 aa17.03■□□□□ 0.32
TPM1-212ENST00000558347 PLB1Q6P1J6 1458 aa17.02■□□□□ 0.32
TPM1-212ENST00000558347 ZCCHC11Q5TAX3 1644 aaKnown RBP17.02■□□□□ 0.31
TPM1-212ENST00000558347 TSPOAP1O95153 1857 aa16.99■□□□□ 0.31
TPM1-212ENST00000558347 ABCA8O94911 1581 aa16.98■□□□□ 0.31
TPM1-212ENST00000558347 SAMD9Q5K651 1589 aa16.97■□□□□ 0.31
TPM1-212ENST00000558347 KIF21BO75037 1637 aa16.97■□□□□ 0.31
TPM1-212ENST00000558347 P3H3Q8IVL6 736 aa16.96■□□□□ 0.31
TPM1-212ENST00000558347 GLI2P10070 1586 aa16.95■□□□□ 0.3
TPM1-212ENST00000558347 EPRSP07814 1512 aaKnown RBP16.94■□□□□ 0.3
TPM1-212ENST00000558347 PPRC1Q5VV67 1664 aaKnown RBP16.92■□□□□ 0.3
TPM1-212ENST00000558347 RANGAP1P46060 587 aaPredicted RBP16.91■□□□□ 0.3
TPM1-212ENST00000558347 WDR7Q9Y4E6 1490 aa16.9■□□□□ 0.3
TPM1-212ENST00000558347 KDM6BO15054 1643 aa16.89■□□□□ 0.29
TPM1-212ENST00000558347 MAP3K4Q9Y6R4 1608 aa16.89■□□□□ 0.29
TPM1-212ENST00000558347 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
TPM1-212ENST00000558347 FHOD3Q2V2M9 1422 aa16.86■□□□□ 0.29
TPM1-212ENST00000558347 RAPGEF6Q8TEU7 1601 aa16.85■□□□□ 0.29
TPM1-212ENST00000558347 ARID3CA6NKF2 412 aa16.85■□□□□ 0.29
TPM1-212ENST00000558347 ATP10BO94823 1461 aa16.84■□□□□ 0.29
TPM1-212ENST00000558347 EFCAB5A4FU69 1503 aa16.83■□□□□ 0.28
TPM1-212ENST00000558347 UBTFP17480 764 aaKnown RBP16.8■□□□□ 0.28
TPM1-212ENST00000558347 KCNH8Q96L42 1107 aa16.8■□□□□ 0.28
TPM1-212ENST00000558347 NUP153P49790 1475 aaKnown RBP16.8■□□□□ 0.28
TPM1-212ENST00000558347 CFAP43Q8NDM7 1665 aa16.79■□□□□ 0.28
TPM1-212ENST00000558347 TEX14Q8IWB6 1497 aa16.78■□□□□ 0.28
TPM1-212ENST00000558347 COL17A1Q9UMD9 1497 aaPredicted RBP16.77■□□□□ 0.28
TPM1-212ENST00000558347 CD109Q6YHK3 1445 aa16.76■□□□□ 0.27
TPM1-212ENST00000558347 MAGI3Q5TCQ9 1506 aa16.74■□□□□ 0.27
TPM1-212ENST00000558347 ARHGAP35Q9NRY4 1499 aa16.73■□□□□ 0.27
TPM1-212ENST00000558347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.72■□□□□ 0.27
TPM1-212ENST00000558347 HNRNPUL2Q1KMD3 747 aaKnown RBP16.72■□□□□ 0.27
TPM1-212ENST00000558347 AEBP2Q6ZN18 517 aaPredicted RBP16.72■□□□□ 0.27
TPM1-212ENST00000558347 ABCA9Q8IUA7 1624 aa16.71■□□□□ 0.27
TPM1-212ENST00000558347 FMN1Q68DA7 1419 aa16.66■□□□□ 0.26
TPM1-212ENST00000558347 CDK13Q14004 1512 aaKnown RBP16.66■□□□□ 0.26
TPM1-212ENST00000558347 PLEKHD1A6NEE1 506 aa16.64■□□□□ 0.25
TPM1-212ENST00000558347 KDM4FA0A1W2PPD8 638 aa16.63■□□□□ 0.25
TPM1-212ENST00000558347 HECW1Q76N89 1606 aa16.63■□□□□ 0.25
TPM1-212ENST00000558347 ARAP3Q8WWN8 1544 aa16.61■□□□□ 0.25
TPM1-212ENST00000558347 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.6■□□□□ 0.25
TPM1-212ENST00000558347 ATP1B4Q9UN42 357 aaPredicted RBP16.6■□□□□ 0.25
TPM1-212ENST00000558347 LRRIQ1Q96JM4 1722 aa16.59■□□□□ 0.25
TPM1-212ENST00000558347 TTC37Q6PGP7 1564 aa16.58■□□□□ 0.25
TPM1-212ENST00000558347 NEO1Q92859 1461 aa16.58■□□□□ 0.24
TPM1-212ENST00000558347 PHLDB1Q86UU1 1377 aa16.56■□□□□ 0.24
TPM1-212ENST00000558347 ADGRL1O94910 1474 aa16.55■□□□□ 0.24
TPM1-212ENST00000558347 PCF11O94913 1555 aaKnown RBP16.55■□□□□ 0.24
TPM1-212ENST00000558347 CLIP1P30622 1438 aa16.53■□□□□ 0.24
TPM1-212ENST00000558347 FRMPD1Q5SYB0 1578 aa16.52■□□□□ 0.24
TPM1-212ENST00000558347 RAPGEF3O95398 923 aa16.52■□□□□ 0.24
TPM1-212ENST00000558347 CASKIN1Q8WXD9 1431 aa16.52■□□□□ 0.23
TPM1-212ENST00000558347 FANCAO15360 1455 aa16.51■□□□□ 0.23
TPM1-212ENST00000558347 KIF14Q15058 1648 aa16.51■□□□□ 0.23
TPM1-212ENST00000558347 CFAP74Q9C0B2 1584 aa16.5■□□□□ 0.23
TPM1-212ENST00000558347 CDK11AQ9UQ88 783 aaPredicted RBP16.5■□□□□ 0.23
TPM1-212ENST00000558347 AKNAQ7Z591 1439 aa16.49■□□□□ 0.23
TPM1-212ENST00000558347 TROQ12816 1431 aaPredicted RBP16.49■□□□□ 0.23
TPM1-212ENST00000558347 RICTORQ6R327 1708 aa16.47■□□□□ 0.23
TPM1-212ENST00000558347 PLCH2O75038 1416 aa16.47■□□□□ 0.23
TPM1-212ENST00000558347 DENND4BO75064 1496 aaPredicted RBP16.46■□□□□ 0.23
TPM1-212ENST00000558347 CCDC18Q5T9S5 1454 aa16.46■□□□□ 0.23
TPM1-212ENST00000558347 FYCO1Q9BQS8 1478 aa16.46■□□□□ 0.23
TPM1-212ENST00000558347 MYO5CQ9NQX4 1742 aa16.46■□□□□ 0.23
TPM1-212ENST00000558347 CEP162Q5TB80 1403 aa16.4■□□□□ 0.22
TPM1-212ENST00000558347 ARHGEF40Q8TER5 1519 aa16.4■□□□□ 0.22
TPM1-212ENST00000558347 SCAPERQ9BY12 1400 aa16.4■□□□□ 0.22
TPM1-212ENST00000558347 ZMYM4Q5VZL5 1548 aa16.39■□□□□ 0.21
TPM1-212ENST00000558347 CDC42BPBQ9Y5S2 1711 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms